ISAli11

  • Family ISL3
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
ND Azospirillum lipoferum
Azospirillum lipoferum 4B
Azospirillum lipoferum 4B plasmid p3AZO550
DNA section
IS Length : 1739 bp

Ends


IR Length : 23/24

IRL : GGCCCATCCGCATTCCCGATGCAGATCGAAGCGAGGATGAGCACATAGAG
IRR : GGCCCATCCGCATTCCCGGTGCAGGGTAGCAGCCTAGGCTTGTGCATTCA

Insertion site


Left flankDirect repeatRight flankDR Length
AAAGGCCGAATGAAGTTTCAGCGCCGGCCTTCCGCGT0
CGTTCTGGGAAACTTCTGAAACTTCATTCGGCCTTTA0

DNA sequence

GGCCCATCCGCATTCCCGATGCAGATCGAAGCGAGGATGAGCACATAGAGGGAACGATTTTCCTCCAGAGCCCCGGTTTCCTTGTCCAAATCACTGCTTT
CGTTGCTCCCAACCGGCCTTGTCGTCGATCAGGTTTCCGTCGACGCTGATCGGGTGGCGATCACGGCCCACATGCGGGCCACAAGGGCGGCCTGTCCGCT
GTGCCATTGCCCCTCCGCACGCGTCCACAGTCGGTACTCCCGACATCTGGGCGACCTGCCGTGGCAGGGCCGGGTTGGCGACCTCCACCTGCAGGTTCGC
CGCTTCCGGTGTGCGGTGGCGGACTGTCCCCGCCGCATCTTCGCCGAGCCGCTGCCCACGGTGGCGGCCCCTCGGGTCCGGCGCACCCGGCGGCTTGCCG
AGGCGCAGCGCGCCATTGCACTGAGTGCCGGCGGAAATCCCGGCGCCCGGCTGTCCACACGGCTCGCCATGCCGGTCAGTGGCGACACGCTGCTGCGCCT
GATCCGCGCGGTGCCCGTGGTGCCGGCCCCACCGCCTCAAATCGTCGGGATCGATGACTGGGCTTGGCGCCGGGGTAAGCGCTACGGCACCATCATCGTC
GATCTCGAACGCAACCGCCCCATCGACCTCCTGCCCGACCGTCAGGCCGACACCGTTGCCGCATGGCTGAAAGCCCATCCTGGTGTCGAGATCGTCGCCC
GTGACCGTGCTGGCGCCTACGCCGATGGCGTCCGTCAGGGCGCGCCCTCCGCTACCCAGGTCGCGGATCGCTGGCACCTCCTGCACAATGTGACCGACAC
CTTGCGGGAGGTCCTCACCGGCCATCACCGCGACCTCCGAGCCGCCGCCAAGCTGGCTGTCGCTCCGCTGGGCAAAACCGAGCAGGACCCGCACCTGCTG
CTGTCGGATGAGGTTTCCAGTCCACCGACCCGGCGAGAGCAGCGGAGCGCTGCCCTTCATGCCGCCCGCCATGCCCGCCATGACGAGGTCGTCGCGCTGA
AAACCCGCGGGTGGTCGCAAACGCGTATCGCTGAAACGCTCCACCTCGATCGCAAAACGGTGCGGGTGTGGCTGCGGTCCGGGCAGCCGCCGGCATGGCG
TCAGCCGGCCAAGGGGAGCCGGCTTGATCCGTTCCTCGATCACCTGCAGCAGCGCTGGGATGACGGCTGCCACAACGCCGCTCAGCTCTGCCGGGAGATC
AAATCCCTCGGCTTTACCGGTCAGCGGACACTGGTTCGGGACTGGGCACGGCCTCTGCGACAGGCCGTAGGAAGTGCAGCATCCATGGCATTGGCATCAT
GGCCGGCACCGTCGCGCCGACGGGCAGCATGGCTGGTGATTGCCGACGAGCATGAGGTCGACCCGACCGAACAGGCCTTCGTCTCGGCCCTGATCGCCCG
ATCGCCGGAACTGGCACGGACCATCACCGTGGCCCGTGCCTTTCGGGCGATGGTCCGGGGACAACGAGCCGGAGAGTTGGACAACTGGCTGTTGACGGCG
GACGGCACCCCCTTGGCGGGCTTTGCCAATGGTTTGAAGAGCGACCTTGCCGCTGTACGGGCGGCTCTGTCGCTGCCGTGGAGCACCGGGCCGGTGGAGG
GGCAGATCAGCAGGCTGAAGACGATCAAGCGCATGATGAACGGCCGCGGCGGCTTCGATTTGCTGCGTCATCGCGTGCTTGAGGCTGCCTGAATGCACAA
GCCTAGGCTGCTACCCTGCACCGGGAATGCGGATGGGCC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1377 bp458 aa3161692+No
ORF function : Transposase
Chemistry : Unknow

ORF sequence :

VADCPRRIFAEPLPTVAAPRVRRTRRLAEAQRAIALSAGGNPGARLSTRLAMPVSGDTLLRLIRAVPVVPAPPPQIVGIDDWAWRRGKRYGTIIVDLERN
RPIDLLPDRQADTVAAWLKAHPGVEIVARDRAGAYADGVRQGAPSATQVADRWHLLHNVTDTLREVLTGHHRDLRAAAKLAVAPLGKTEQDPHLLLSDEV
SSPPTRREQRSAALHAARHARHDEVVALKTRGWSQTRIAETLHLDRKTVRVWLRSGQPPAWRQPAKGSRLDPFLDHLQQRWDDGCHNAAQLCREIKSLGF
TGQRTLVRDWARPLRQAVGSAASMALASWPAPSRRRAAWLVIADEHEVDPTEQAFVSALIARSPELARTITVARAFRAMVRGQRAGELDNWLLTADGTPL
AGFANGLKSDLAAVRAALSLPWSTGPVEGQISRLKTIKRMMNGRGGFDLLRHRVLEAA

 

Blast result :
Comments
ISAli11 is 55% aa similar to ISFal1.
References
1] ISfinder annotation (2008)