ISGob2
- Family IS66
- Group ISBst12
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
NZ_ABGO00000000 | ND | Gemmata obscuriglobus | Gemmata obscuriglobus UQM 2246 |
DNA section
IS Length : 1486 bp
Ends
IR Length : 16/17
IRL : GTAACCGTTCACGGGGTCTGATCGCCGGTCGACTTGCCGGGGTCGGCCTG
IRR : GCACCCCTCTGTTCGCCAAACCGCTCGACCCGCGTGCGCTGGCCGCGGCC
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
CCAGGTGAAC | GCGGGCTCAG | 0 |
DNA sequence
GTAACCGTTCACGGGGTCTGATCGCCGGTCGACTTGCCGGGGTCGGCCTGGAGCCGCAGATTCGTGTGTAATGGGCGCAACCCCGCCAATCCCTGAGGAG
CTCTGGAACCAACTGCCGGCGGCGGCCCAGGCCGCCGTGTCGGCGGTAATTGCGGCCCTGGAAGCCCGGGTTGCGGCCCTGGAAGCCCGTCTCAACCAGA
GCCCGTCCAACTCGTCCAAGCCCCCGTCCTCCGACGGCCCGCAGGTGAAGCCGGCACCGCCTCGGAAAGGAACCGGGAAGGCCCGGGGCGGACAACCCGG
GCACCCCAAGCGGACCCGCCCGGACCTGCCCCCGGACACGGTCCTCGAGTTGCGGCCCGAGGTGTGCGCCGGGTGCTCCGGTGCGCTCGCCGGGACCGAT
CCCGAGCCCATTCGCCACCAGGTGCTCGAGTTACCCGCGGTGCGGCCCCAGGTGACCGAGTACCGGCGACACCGGCTCACCTGCCCCCGTTGCGCGCGGG
TCACATGCCCACCATTGCCACCCGGGGTGCGGGGCGGATACGGCCCCCGGACCCAGGCCGCCTGCGCGGTCCTGACCGGGGCGTACCGACTCGGCAAGCG
GGGCGTCGCGCGGGTGCTGAGGGACCTGTTCGGGGTGCCGATCAGCCCGGGTGCCGTGTGCCACCTCCAGGACCGCACCGCGGGCGCCCGGGAGCCGGTC
ACCACGGCGGTCCACGCCCACCTCACGGGGAGGTCCGCGAACGTGGACGAGACCGGATGGCGCGAGGGCCGGAGCCGGGCCTGGCTGTGGGTCGCGGTGG
CCGACCGGTTGACCGGGTTCGTGATCCGCCGGTCCCGAGCCCGCAAGGTGTTGGGCGAGCTGATCCCGGGAACCCCGGGTGTGCTCACCACCGACCGGTA
CTCGGTGTACGACCACCTGTCACCGGACCGGCGCCAGGTGTGTTGGGCGCACCTGCGGCGGGACTTCCAGGCGATGATCGACCGGGGCAACGACGGGTCC
CCGATCGGGACCGCCCTGTTGGCCTCGGCCGATGCGCTCCTGGGCGCGTGGCCCCGGGTGCGAGACGGGACGTTGAGCCGGGCCCGGTTCGTGTCCCATC
ACCTGGGCGGGGTTCGGGCGGCCGTCTACGCCCAACTGGGGCGCGGGCGCACGTGCGGGTGCGCGATCACCGCGGGCGTGTGCCGCGAGTTGCTTCGGTT
CGGTGGAGCCCTGTACACGTTCGCCCGGGTGGACGGCGTCGAGCCCACCAACAACGCGGCCGAGCGGGCCCTGCGCCACGCGGTGTGCTGGCGCAAGACC
AGTTACGGCACCGACTCCGAACGCGGCTCCCGATTCGTCGAGCGGGTGCTCACCGTCGTCGCCTCGTGCCAGCAGCAAGGCCGAAACGTGCTCACCTTCC
TCACCGACGCCATTCAGGCCGCACGAAACGGCACACCCGTGCCCTCACTCCTTCCCGGCACCCATCGCCACCCCGTGAACGGATACGCGGGCTCAGGTGC
GGCTCACGAGCAATAGGTCATGGAGGGCCGCGGCCAGCGCACGCGGGTCGAGCGGTTTGGCGAACAGAGGGGTGC
CTCTGGAACCAACTGCCGGCGGCGGCCCAGGCCGCCGTGTCGGCGGTAATTGCGGCCCTGGAAGCCCGGGTTGCGGCCCTGGAAGCCCGTCTCAACCAGA
GCCCGTCCAACTCGTCCAAGCCCCCGTCCTCCGACGGCCCGCAGGTGAAGCCGGCACCGCCTCGGAAAGGAACCGGGAAGGCCCGGGGCGGACAACCCGG
GCACCCCAAGCGGACCCGCCCGGACCTGCCCCCGGACACGGTCCTCGAGTTGCGGCCCGAGGTGTGCGCCGGGTGCTCCGGTGCGCTCGCCGGGACCGAT
CCCGAGCCCATTCGCCACCAGGTGCTCGAGTTACCCGCGGTGCGGCCCCAGGTGACCGAGTACCGGCGACACCGGCTCACCTGCCCCCGTTGCGCGCGGG
TCACATGCCCACCATTGCCACCCGGGGTGCGGGGCGGATACGGCCCCCGGACCCAGGCCGCCTGCGCGGTCCTGACCGGGGCGTACCGACTCGGCAAGCG
GGGCGTCGCGCGGGTGCTGAGGGACCTGTTCGGGGTGCCGATCAGCCCGGGTGCCGTGTGCCACCTCCAGGACCGCACCGCGGGCGCCCGGGAGCCGGTC
ACCACGGCGGTCCACGCCCACCTCACGGGGAGGTCCGCGAACGTGGACGAGACCGGATGGCGCGAGGGCCGGAGCCGGGCCTGGCTGTGGGTCGCGGTGG
CCGACCGGTTGACCGGGTTCGTGATCCGCCGGTCCCGAGCCCGCAAGGTGTTGGGCGAGCTGATCCCGGGAACCCCGGGTGTGCTCACCACCGACCGGTA
CTCGGTGTACGACCACCTGTCACCGGACCGGCGCCAGGTGTGTTGGGCGCACCTGCGGCGGGACTTCCAGGCGATGATCGACCGGGGCAACGACGGGTCC
CCGATCGGGACCGCCCTGTTGGCCTCGGCCGATGCGCTCCTGGGCGCGTGGCCCCGGGTGCGAGACGGGACGTTGAGCCGGGCCCGGTTCGTGTCCCATC
ACCTGGGCGGGGTTCGGGCGGCCGTCTACGCCCAACTGGGGCGCGGGCGCACGTGCGGGTGCGCGATCACCGCGGGCGTGTGCCGCGAGTTGCTTCGGTT
CGGTGGAGCCCTGTACACGTTCGCCCGGGTGGACGGCGTCGAGCCCACCAACAACGCGGCCGAGCGGGCCCTGCGCCACGCGGTGTGCTGGCGCAAGACC
AGTTACGGCACCGACTCCGAACGCGGCTCCCGATTCGTCGAGCGGGTGCTCACCGTCGTCGCCTCGTGCCAGCAGCAAGGCCGAAACGTGCTCACCTTCC
TCACCGACGCCATTCAGGCCGCACGAAACGGCACACCCGTGCCCTCACTCCTTCCCGGCACCCATCGCCACCCCGTGAACGGATACGCGGGCTCAGGTGC
GGCTCACGAGCAATAGGTCATGGAGGGCCGCGGCCAGCGCACGCGGGTCGAGCGGTTTGGCGAACAGAGGGGTGC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1446 bp | 481 aa | 71 | 1516 | + | No |
Chemistry : DDE
ORF sequence :
MGATPPIPEELWNQLPAAAQAAVSAVIAALEARVAALEARLNQSPSNSSKPPSSDGPQVKPAPPRKGTGKARGGQPGHPKRTRPDLPPDTVLELRPEVCA
GCSGALAGTDPEPIRHQVLELPAVRPQVTEYRRHRLTCPRCARVTCPPLPPGVRGGYGPRTQAACAVLTGAYRLGKRGVARVLRDLFGVPISPGAVCHLQ
DRTAGAREPVTTAVHAHLTGRSANVDETGWREGRSRAWLWVAVADRLTGFVIRRSRARKVLGELIPGTPGVLTTDRYSVYDHLSPDRRQVCWAHLRRDFQ
AMIDRGNDGSPIGTALLASADALLGAWPRVRDGTLSRARFVSHHLGGVRAAVYAQLGRGRTCGCAITAGVCRELLRFGGALYTFARVDGVEPTNNAAERA
LRHAVCWRKTSYGTDSERGSRFVERVLTVVASCQQQGRNVLTFLTDAIQAARNGTPVPSLLPGTHRHPVNGYAGSGAAHEQ
GCSGALAGTDPEPIRHQVLELPAVRPQVTEYRRHRLTCPRCARVTCPPLPPGVRGGYGPRTQAACAVLTGAYRLGKRGVARVLRDLFGVPISPGAVCHLQ
DRTAGAREPVTTAVHAHLTGRSANVDETGWREGRSRAWLWVAVADRLTGFVIRRSRARKVLGELIPGTPGVLTTDRYSVYDHLSPDRRQVCWAHLRRDFQ
AMIDRGNDGSPIGTALLASADALLGAWPRVRDGTLSRARFVSHHLGGVRAAVYAQLGRGRTCGCAITAGVCRELLRFGGALYTFARVDGVEPTNNAAERA
LRHAVCWRKTSYGTDSERGSRFVERVLTVVASCQQQGRNVLTFLTDAIQAARNGTPVPSLLPGTHRHPVNGYAGSGAAHEQ
Blast result :
Comments
ISGob2 is 68% aa similar to ISGob1.
References
1] ISfinder annotation (2008).
2] Ward,N. (2007) Direct Submission GenBank.
2] Ward,N. (2007) Direct Submission GenBank.