ISBth165
- Family ISNCY
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
DQ174274 | ND | Bacillus thuringiensis | Bacillus thuringiensis serovar tenebrionis YBT-1765 |
DNA section
IS Length : 996 bp
Ends
IR Length : 15
IRL : GAGGGTGTTGCAAAATTCATAAATATTCAAAAATGAATGCATAAAAAAAT
IRR : GAGGGTGTTGCAAAACTAAAATAAATATGCAATGTTATGAATCAGAAAAA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|
DNA sequence
GAGGGTGTTGCAAAATTCATAAATATTCAAAAATGAATGCATAAAAAAATCCGTTTTCTTGGAAGAATGATAGTAATCCAAACTATCTCCAGAAAGGACG
GATTTACTAGTATGATAATCAATTTTGATCAAAATCAATCGGTTTTACAAATTTTATTTGCGTATGTAGACAGTCTAACTATTGGAGGCGTTCCGCCTCT
TACAGGCCGTCCACCCATCTGTAGAAAGGCTTTACTCAAATGTTTTTTTGTGAAAACGGTATTTCAAATCAATTCTTTACGTAAATTAACTCGTTTTTTA
CATCAATATCCTTCATTTCGTGTATCTTGTGGTCTTTCTTTTGTTCCTCATATCTCTACTTTTTCACGTGTAGGCAATTGGTTTCGCAACGAAGGTATCC
CAATGATTCATAAACAAACCCTGGAAGAAATGAATTTAGGTTTGATTCCATGTGTTTTAATTAATAGCACTGCCTTACGGAGTAGCTTATATGATTCTCA
AGCGAAATGGGGAAAATCCACCCGTTATGGTTGGTATAAAGGATATAAGGCTCATGTTTGTTCTACACCGGAAGGTATTGTGTTATCTTACTCGTTTACA
ACAGTCAACGTACACGGTAGCAAAATGGCTCCTGTATTGCTTCGAGATATACAAGACCGAAATGTGTTATTTTCCGTTGCAGATGCTGCTTATGATAGTC
AGCACATTTATGAAATTGCACGAATATCAAATATCTTCGCCGTGAATCCAATCAATCCAAGGAATGGTGAACAAATCAAGAGTACACATCGTCGTGTATT
GTCTCATTTTGTACAAACCCTCTTTGGCAAACAGTTGATGAAAGAACGTGGGAAAATTGAACAACAATTTAGTAATCTCAAAGATAAAGGGCTGGAACAG
CCACGTTGGTATGGTCAAAATCGTTATCTACTGCATGTTCAGCTAGTTTTTCTGATTCATAACATTGCATATTTATTTTAGTTTTGCAACACCCTC
GATTTACTAGTATGATAATCAATTTTGATCAAAATCAATCGGTTTTACAAATTTTATTTGCGTATGTAGACAGTCTAACTATTGGAGGCGTTCCGCCTCT
TACAGGCCGTCCACCCATCTGTAGAAAGGCTTTACTCAAATGTTTTTTTGTGAAAACGGTATTTCAAATCAATTCTTTACGTAAATTAACTCGTTTTTTA
CATCAATATCCTTCATTTCGTGTATCTTGTGGTCTTTCTTTTGTTCCTCATATCTCTACTTTTTCACGTGTAGGCAATTGGTTTCGCAACGAAGGTATCC
CAATGATTCATAAACAAACCCTGGAAGAAATGAATTTAGGTTTGATTCCATGTGTTTTAATTAATAGCACTGCCTTACGGAGTAGCTTATATGATTCTCA
AGCGAAATGGGGAAAATCCACCCGTTATGGTTGGTATAAAGGATATAAGGCTCATGTTTGTTCTACACCGGAAGGTATTGTGTTATCTTACTCGTTTACA
ACAGTCAACGTACACGGTAGCAAAATGGCTCCTGTATTGCTTCGAGATATACAAGACCGAAATGTGTTATTTTCCGTTGCAGATGCTGCTTATGATAGTC
AGCACATTTATGAAATTGCACGAATATCAAATATCTTCGCCGTGAATCCAATCAATCCAAGGAATGGTGAACAAATCAAGAGTACACATCGTCGTGTATT
GTCTCATTTTGTACAAACCCTCTTTGGCAAACAGTTGATGAAAGAACGTGGGAAAATTGAACAACAATTTAGTAATCTCAAAGATAAAGGGCTGGAACAG
CCACGTTGGTATGGTCAAAATCGTTATCTACTGCATGTTCAGCTAGTTTTTCTGATTCATAACATTGCATATTTATTTTAGTTTTGCAACACCCTC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
870 bp | 289 aa | 112 | 981 | + | No |
Chemistry : Unknow
ORF sequence :
MIINFDQNQSVLQILFAYVDSLTIGGVPPLTGRPPICRKALLKCFFVKTVFQINSLRKLTRFLHQYPSFRVSCGLSFVPHISTFSRVGNWFRNEGIPMIH
KQTLEEMNLGLIPCVLINSTALRSSLYDSQAKWGKSTRYGWYKGYKAHVCSTPEGIVLSYSFTTVNVHGSKMAPVLLRDIQDRNVLFSVADAAYDSQHIY
EIARISNIFAVNPINPRNGEQIKSTHRRVLSHFVQTLFGKQLMKERGKIEQQFSNLKDKGLEQPRWYGQNRYLLHVQLVFLIHNIAYLF
KQTLEEMNLGLIPCVLINSTALRSSLYDSQAKWGKSTRYGWYKGYKAHVCSTPEGIVLSYSFTTVNVHGSKMAPVLLRDIQDRNVLFSVADAAYDSQHIY
EIARISNIFAVNPINPRNGEQIKSTHRRVLSHFVQTLFGKQLMKERGKIEQQFSNLKDKGLEQPRWYGQNRYLLHVQLVFLIHNIAYLF
Blast result :
Comments
References
1] Huang,J., Guo,S., Mahillon,J., Van der Auwera,G.A., Wang,L., Han,D., Yu,Z. and Sun,M. (2006) BMC Genomics 7 (1), 270