ISBth165

  • Family ISNCY
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
DQ174274 ND Bacillus thuringiensis
Bacillus thuringiensis serovar tenebrionis YBT-1765
DNA section
IS Length : 996 bp

Ends


IR Length : 15

IRL : GAGGGTGTTGCAAAATTCATAAATATTCAAAAATGAATGCATAAAAAAAT
IRR : GAGGGTGTTGCAAAACTAAAATAAATATGCAATGTTATGAATCAGAAAAA

Insertion site


Left flankDirect repeatRight flankDR Length

DNA sequence

GAGGGTGTTGCAAAATTCATAAATATTCAAAAATGAATGCATAAAAAAATCCGTTTTCTTGGAAGAATGATAGTAATCCAAACTATCTCCAGAAAGGACG
GATTTACTAGTATGATAATCAATTTTGATCAAAATCAATCGGTTTTACAAATTTTATTTGCGTATGTAGACAGTCTAACTATTGGAGGCGTTCCGCCTCT
TACAGGCCGTCCACCCATCTGTAGAAAGGCTTTACTCAAATGTTTTTTTGTGAAAACGGTATTTCAAATCAATTCTTTACGTAAATTAACTCGTTTTTTA
CATCAATATCCTTCATTTCGTGTATCTTGTGGTCTTTCTTTTGTTCCTCATATCTCTACTTTTTCACGTGTAGGCAATTGGTTTCGCAACGAAGGTATCC
CAATGATTCATAAACAAACCCTGGAAGAAATGAATTTAGGTTTGATTCCATGTGTTTTAATTAATAGCACTGCCTTACGGAGTAGCTTATATGATTCTCA
AGCGAAATGGGGAAAATCCACCCGTTATGGTTGGTATAAAGGATATAAGGCTCATGTTTGTTCTACACCGGAAGGTATTGTGTTATCTTACTCGTTTACA
ACAGTCAACGTACACGGTAGCAAAATGGCTCCTGTATTGCTTCGAGATATACAAGACCGAAATGTGTTATTTTCCGTTGCAGATGCTGCTTATGATAGTC
AGCACATTTATGAAATTGCACGAATATCAAATATCTTCGCCGTGAATCCAATCAATCCAAGGAATGGTGAACAAATCAAGAGTACACATCGTCGTGTATT
GTCTCATTTTGTACAAACCCTCTTTGGCAAACAGTTGATGAAAGAACGTGGGAAAATTGAACAACAATTTAGTAATCTCAAAGATAAAGGGCTGGAACAG
CCACGTTGGTATGGTCAAAATCGTTATCTACTGCATGTTCAGCTAGTTTTTCTGATTCATAACATTGCATATTTATTTTAGTTTTGCAACACCCTC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
870 bp289 aa112981+No
ORF function : Transposase
Chemistry : Unknow

ORF sequence :

MIINFDQNQSVLQILFAYVDSLTIGGVPPLTGRPPICRKALLKCFFVKTVFQINSLRKLTRFLHQYPSFRVSCGLSFVPHISTFSRVGNWFRNEGIPMIH
KQTLEEMNLGLIPCVLINSTALRSSLYDSQAKWGKSTRYGWYKGYKAHVCSTPEGIVLSYSFTTVNVHGSKMAPVLLRDIQDRNVLFSVADAAYDSQHIY
EIARISNIFAVNPINPRNGEQIKSTHRRVLSHFVQTLFGKQLMKERGKIEQQFSNLKDKGLEQPRWYGQNRYLLHVQLVFLIHNIAYLF

 

Blast result :
Comments
References
1] Huang,J., Guo,S., Mahillon,J., Van der Auwera,G.A., Wang,L., Han,D., Yu,Z. and Sun,M. (2006) BMC Genomics 7 (1), 270