ISAcr2

  • Family IS6
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
CP000689 ND Acidiphilium cryptum
Acidiphilium cryptum JF-5 plasmid pACRY01
DNA section
IS Length : 892 bp

Ends


IR Length : 14

IRL : GGCTCTGTTGCAAAGTCCGGTTTCCTCTGATGGGATTGGATGCAGGCTGG
IRR : GGCTCTGTTGCAAATTTTGTGAACAGGGGGAGTGACGTATTCTGGATGGG

Insertion site


Left flankDirect repeatRight flankDR Length
GCGTAGAGAGGGCGGTCGACAGGCTTTCACTCAGAGGCCATTTCGAAA0

DNA sequence

GGCTCTGTTGCAAAGTCCGGTTTCCTCTGATGGGATTGGATGCAGGCTGGTGGAGGAGCGGTGTTGTCGGCGTTCAGAGGGCGGCATTTCGACGATGAGA
TCGTGCTTTGGGCGGTACGCTGGTATTGCCGGTATGGGATCAGCTACCGGGATCTTGAGCAGATGAGGGGTGAGCGCGGCGTGAACGTTGATCATTCGAC
GATTTACCGCTGGGTTCAGCGATATGCCCCGGAGATTGAGAAGCTGCTGCGCTGGCAATGGCGGCGGCCGGCCTCGACGAGCTGGCGGGTCGATGAGACC
TATATCAAGGTCCGTGGCGAATGGGCGTATTTATATCGTGCAGTCGACAAGCATGGGAACACGATCGATATCTATCTTTCGCCGACGCGGAACGCGAAAG
CGGCAAAGCGCTTTCTGGGCAAGGCCCTGAACGGGTTGAAGGACTGGGAGAAACCGGAGGTCATCAATACCGACAAGGCGCCGACCTACGCCATCGCCAT
TGCGGAACTGAAAGCCGAAGGCAAATGTCCCGAGGTTACCCTCCATCGCCAGGTCAAATACCTGAACAACGTCGTCGAGGCGGACCATGGCAAGCTCAAG
CAGCTGACCCGCCCGGTGCGCGGCTTCAAGACACTGAAGACGGCCTATGCCACGAGCAAGGGCTTCGAGGTGATGCGGGCCCTGCGTAAGGGGTAGGCCG
CCATGTTCAATCTCACGCGGGATATTTGCGGTGAGGCGCGCATCGTCGAACGCGCCTTCGGCCTCGGTGCCTGCGCCCTTGCCGAAGCAGTCCAGCTCAT
CGGCCCACAAACGGAACGCGAGGCGGCCTGATAAGCTCGGCTCCCATCCAGAATACGTCACTCCCCCTGTTCACAAAATTTGCAACAGAGCC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
657 bp218 aa40696+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MQAGGGAVLSAFRGRHFDDEIVLWAVRWYCRYGISYRDLEQMRGERGVNVDHSTIYRWVQRYAPEIEKLLRWQWRRPASTSWRVDETYIKVRGEWAYLYR
AVDKHGNTIDIYLSPTRNAKAAKRFLGKALNGLKDWEKPEVINTDKAPTYAIAIAELKAEGKCPEVTLHRQVKYLNNVVEADHGKLKQLTRPVRGFKTLK
TAYATSKGFEVMRALRKG

 

Blast result :
Comments
ISAcr2 is 86% aa similar to ISStag1.
References
1] Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,J.C., Glavina
del Rio,T., Hammon,N., Israni,S., Dalin,E., Tice,H., Pitluck,S.,Sims,D., Brettin,T., Bruce,D., Han,C., Schmutz,J., Larimer,F.,Land,M., Hauser,L., Kyrpides,N., Kim,E., Magnuson,T. and Richardson,P. (2007) Direct submission GenBank

2] ISfinder annotation (2008).