ISAzvi11
- Family IS481
- Group
Isoform Synonym(s)
| Accession number | Transposition | Origin | Host |
|---|---|---|---|
| CP001157 | ND | Azotobacter vinelandii | Azotobacter vinelandii DJ Azotobacter vinelandii AvOP |
DNA section
IS Length : 1221 bp
Ends
IR Length : 16/18
IRL : TGTGCGGGGACATGGTTGACACTTTCGGCAGTGACCTGCCGAGCCAACGA
IRR : TGTGCGGGGACATGGTTGACGGATTATGCGTCAGTTTTGGCTAACTCCCG
Insertion site
| Left flank | Direct repeat | Right flank | DR Length |
|---|---|---|---|
| AGGTGACAGG | TGTGTCCACC | 0 |
DNA sequence
TGTGCGGGGACATGGTTGACACTTTCGGCAGTGACCTGCCGAGCCAACGACCATGCCCTGGAACATTCAAGACACCATGAACCTACGAGAAGAATTTGTC
CTGCTGGCCCAGCAGGAAGGCAGCAACCGCCGTGAGTTGTGCCGACGCTTCGGGATCAGCCCGCAGACTGCGTACAAGTGGCTGGTCCGATATGAACAGC
AAGGGCGTGCCGGCCTGGCCGACCTTTCCAGGCGCCCCAAGACCAGCCCACACCTGACATCGCCCAGTCTGGAAGCCCGGGTGGTGGAGCTGCGCCAGGC
CCATCCGTGCTGGGGTGGACGTAAGCTGAGTCGGCGCTTGCAAGACCTGGGGCATCCAGCCTTGGCGCCAAGCACCATCACCTCTATCCTGCACCGTCAC
GGACTGATCGATCCCCTGGCCTCAGAAGCGGCCGTGCCCTGGAAACGCTTCGAGCACGCGGCACCCAACGATCTGTGGCAAATGGATTTCAAAGGGTATT
TCCAGACATCCGAAGGCCCCTGTCATCCACTGACCGTGCTGGACGACCACTCGCGTTTCAACCTGGGCCTGCGGGCCTGCGCCTGTCAGCGCCATGGCAC
CGTGCAGGGTGAACTGATCGGCATCTTCGAGCGCTATGGCTTGCCGGTACGGATCAACACGGACAACGGCGCCCCTTGGGGTGCCTCGCGCCAACCGGGG
CAATTGACCGAACTTGCCATCTGGCTGATCCGGTTGGGCATCCGCCTGAGCTTCAGCCGTCCTCGTCACCCGCAAACCAACGGCAAGGATGAACGCTTTC
ACCGCTCACTCAAGGCCGAAGTCCTCAATGGCCGCAGCTTCCACACCCTGCACCAGGCCCAGGAAGCCTTCGACAACTGGCGTGTGGTCTACAACCACCA
GCGACCCCACGAAGCCCTTCGGATGGTCACGCCTGTCACACGCTACCGAGTCAGCCCACGGACTTATCCTGTACAACTGCCCACCATTGAATACGGGCCG
GACGATACCGTGGTGACAGTGAAGGCGCTTGGGGCGATCAGGTTCAAAGGACGCAGCTACAAACTCTCCAATCCACTGCGCGACCAGCCGGTGGCCATCC
GTCCGAGCGGCGATACCGACGGCTTATACGACGTGTACTTCGTCCATCACAAGCTGGTGCAGATTGACCTGCGGGAGTTAGCCAAAACTGACGCATAATC
CGTCAACCATGTCCCCGCACA
CTGCTGGCCCAGCAGGAAGGCAGCAACCGCCGTGAGTTGTGCCGACGCTTCGGGATCAGCCCGCAGACTGCGTACAAGTGGCTGGTCCGATATGAACAGC
AAGGGCGTGCCGGCCTGGCCGACCTTTCCAGGCGCCCCAAGACCAGCCCACACCTGACATCGCCCAGTCTGGAAGCCCGGGTGGTGGAGCTGCGCCAGGC
CCATCCGTGCTGGGGTGGACGTAAGCTGAGTCGGCGCTTGCAAGACCTGGGGCATCCAGCCTTGGCGCCAAGCACCATCACCTCTATCCTGCACCGTCAC
GGACTGATCGATCCCCTGGCCTCAGAAGCGGCCGTGCCCTGGAAACGCTTCGAGCACGCGGCACCCAACGATCTGTGGCAAATGGATTTCAAAGGGTATT
TCCAGACATCCGAAGGCCCCTGTCATCCACTGACCGTGCTGGACGACCACTCGCGTTTCAACCTGGGCCTGCGGGCCTGCGCCTGTCAGCGCCATGGCAC
CGTGCAGGGTGAACTGATCGGCATCTTCGAGCGCTATGGCTTGCCGGTACGGATCAACACGGACAACGGCGCCCCTTGGGGTGCCTCGCGCCAACCGGGG
CAATTGACCGAACTTGCCATCTGGCTGATCCGGTTGGGCATCCGCCTGAGCTTCAGCCGTCCTCGTCACCCGCAAACCAACGGCAAGGATGAACGCTTTC
ACCGCTCACTCAAGGCCGAAGTCCTCAATGGCCGCAGCTTCCACACCCTGCACCAGGCCCAGGAAGCCTTCGACAACTGGCGTGTGGTCTACAACCACCA
GCGACCCCACGAAGCCCTTCGGATGGTCACGCCTGTCACACGCTACCGAGTCAGCCCACGGACTTATCCTGTACAACTGCCCACCATTGAATACGGGCCG
GACGATACCGTGGTGACAGTGAAGGCGCTTGGGGCGATCAGGTTCAAAGGACGCAGCTACAAACTCTCCAATCCACTGCGCGACCAGCCGGTGGCCATCC
GTCCGAGCGGCGATACCGACGGCTTATACGACGTGTACTTCGTCCATCACAAGCTGGTGCAGATTGACCTGCGGGAGTTAGCCAAAACTGACGCATAATC
CGTCAACCATGTCCCCGCACA
Protein section
ORF number : 1
ORF 1
| Length | Begin | End | Strand | Fusion ORF | |
|---|---|---|---|---|---|
| 1146 bp | 381 aa | 53 | 1198 | + | No |
Chemistry : DDE
ORF sequence :
MPWNIQDTMNLREEFVLLAQQEGSNRRELCRRFGISPQTAYKWLVRYEQQGRAGLADLSRRPKTSPHLTSPSLEARVVELRQAHPCWGGRKLSRRLQDLG
HPALAPSTITSILHRHGLIDPLASEAAVPWKRFEHAAPNDLWQMDFKGYFQTSEGPCHPLTVLDDHSRFNLGLRACACQRHGTVQGELIGIFERYGLPVR
INTDNGAPWGASRQPGQLTELAIWLIRLGIRLSFSRPRHPQTNGKDERFHRSLKAEVLNGRSFHTLHQAQEAFDNWRVVYNHQRPHEALRMVTPVTRYRV
SPRTYPVQLPTIEYGPDDTVVTVKALGAIRFKGRSYKLSNPLRDQPVAIRPSGDTDGLYDVYFVHHKLVQIDLRELAKTDA
HPALAPSTITSILHRHGLIDPLASEAAVPWKRFEHAAPNDLWQMDFKGYFQTSEGPCHPLTVLDDHSRFNLGLRACACQRHGTVQGELIGIFERYGLPVR
INTDNGAPWGASRQPGQLTELAIWLIRLGIRLSFSRPRHPQTNGKDERFHRSLKAEVLNGRSFHTLHQAQEAFDNWRVVYNHQRPHEALRMVTPVTRYRV
SPRTYPVQLPTIEYGPDDTVVTVKALGAIRFKGRSYKLSNPLRDQPVAIRPSGDTDGLYDVYFVHHKLVQIDLRELAKTDA
Blast result :
Comments
ISAzvi11 is 74% aa similar to ISBxe3.
References
1] Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,C., Glavina,T.,Hammon,N., Israni,S., Pitluck,S. and Richardson,P.(2005)Direct submission GenBank.