ISNmo3

  • Family IS481
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
NZ_AAOF01000005 ND Nitrococcus mobilis
Nitrococcus mobilis Nb-231
DNA section
IS Length : 1061 bp

Ends


IR Length : 22/23

IRL : TGTCGGGTCCCGGATGATTTAATCAATGTCAGGAGCTATCCTCTGTGGGT
IRR : TGTCGGGTCCCGGATGATTATAAACTTGACGTAGAAACAGGTCAGGGTGT

Insertion site


Left flankDirect repeatRight flankDR Length
GTAATGGTTGCTTATCACAGCGTAGG6

DNA sequence

TGTCGGGTCCCGGATGATTTAATCAATGTCAGGAGCTATCCTCTGTGGGTAGCTCGAAGCGTTCTCGGTTATGTTGCCCGGGAGACTCGCTGATATGAAC
ATCCGGCTTCATGCAAACGCCACCACGACACCCAAGATCCGGCGCTATATTCAGCGCTCCGAGAAGACCAACCGCGAGCTGGCCGAGGAGCTTGGCATTG
CGCTGAGCACGGTGCGGATCTGGCGCGCCCGCCAAGACGTCCACGACCGTTCTCACACCCGGCATAATTTGCTAACCACGCTGAGCCCGGCGCAGGAGGC
AATCGCCGTGGAGCTGCGCCGCACACTGCAGCTGCCGCTCGATGATCTGCTTGTGGTGGTGCGCGAGTTCCTCAATCCAGGCGTCTCCCGCTCGGGACTG
GATCGCTGCCTGCGCCGCCATGGGGTCAGCCGGCTGGCGGATCTGCGCCCGGCTGAGCAGGCAAAGCGCCCGAGCAAGGCCTTTAAGGCCTATAGGCCGG
GCTATGTCCATATCGACTACAAATACCTCCCGCAGATGCCCGATGAGACGGCGCGCCGGTATCTGTTTGTGGTCATCGATCGGGCAAGCCGATGGGTTTA
CCTCGAACTCAAGGCGGATAAATCCGCCCGCTCGGCCAGCGCCTTTCTCAAGGCCGTGCGTGAAAAGGCGCCGTTTCGCATCCACCGGCTACTCACTGAC
AACGACAAAGCCTTCACCGACCGTCTGCAGGGCAAACACCGCCAAGCCAGCGGTGAGCATCGCTTTGACCGACTCTGCGCCGAACTCGGTATCGAGCACC
GCCTCGCCCCGGTGCGCCACCCGCAGACCAATGGCATGGTTGAGCGCTTCAACGGGCGCATCAGCGAGGTCTTGGCCACGCATCGCTTCGACTCACGCCA
GGATCTAGAGGCAACCCTCAAACGCTACTGCTACTTGTACAATCATCACATCCCGCAGAAGGCGCTTGACCACCGAGCTCCCATCCAAGCCCTCAAGGAT
TGGCAGCACAAACACCCTGACCTGTTTCTACGTCAAGTTTATAATCATCCGGGACCCGACA
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
968 bp322 aa941061+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

 

Blast result :
Comments
ISNmo3 is 40% aa similar to IS481v1.
There is no Stop Codon.
References
1] Waterbury,J., Ferriera,S., Johnson,J., Kravitz,S., Halpern,A., Remington,K., Beeson,K., Tran,B., Rogers,Y.-H., Friedman,R. and Venter,J.C.(2006) Direct Submission GenBank.