ISNmo3
- Family IS481
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
NZ_AAOF01000005 | ND | Nitrococcus mobilis | Nitrococcus mobilis Nb-231 |
DNA section
IS Length : 1061 bp
Ends
IR Length : 22/23
IRL : TGTCGGGTCCCGGATGATTTAATCAATGTCAGGAGCTATCCTCTGTGGGT
IRR : TGTCGGGTCCCGGATGATTATAAACTTGACGTAGAAACAGGTCAGGGTGT
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
GTAATGGTTG | CTTATC | ACAGCGTAGG | 6 |
DNA sequence
TGTCGGGTCCCGGATGATTTAATCAATGTCAGGAGCTATCCTCTGTGGGTAGCTCGAAGCGTTCTCGGTTATGTTGCCCGGGAGACTCGCTGATATGAAC
ATCCGGCTTCATGCAAACGCCACCACGACACCCAAGATCCGGCGCTATATTCAGCGCTCCGAGAAGACCAACCGCGAGCTGGCCGAGGAGCTTGGCATTG
CGCTGAGCACGGTGCGGATCTGGCGCGCCCGCCAAGACGTCCACGACCGTTCTCACACCCGGCATAATTTGCTAACCACGCTGAGCCCGGCGCAGGAGGC
AATCGCCGTGGAGCTGCGCCGCACACTGCAGCTGCCGCTCGATGATCTGCTTGTGGTGGTGCGCGAGTTCCTCAATCCAGGCGTCTCCCGCTCGGGACTG
GATCGCTGCCTGCGCCGCCATGGGGTCAGCCGGCTGGCGGATCTGCGCCCGGCTGAGCAGGCAAAGCGCCCGAGCAAGGCCTTTAAGGCCTATAGGCCGG
GCTATGTCCATATCGACTACAAATACCTCCCGCAGATGCCCGATGAGACGGCGCGCCGGTATCTGTTTGTGGTCATCGATCGGGCAAGCCGATGGGTTTA
CCTCGAACTCAAGGCGGATAAATCCGCCCGCTCGGCCAGCGCCTTTCTCAAGGCCGTGCGTGAAAAGGCGCCGTTTCGCATCCACCGGCTACTCACTGAC
AACGACAAAGCCTTCACCGACCGTCTGCAGGGCAAACACCGCCAAGCCAGCGGTGAGCATCGCTTTGACCGACTCTGCGCCGAACTCGGTATCGAGCACC
GCCTCGCCCCGGTGCGCCACCCGCAGACCAATGGCATGGTTGAGCGCTTCAACGGGCGCATCAGCGAGGTCTTGGCCACGCATCGCTTCGACTCACGCCA
GGATCTAGAGGCAACCCTCAAACGCTACTGCTACTTGTACAATCATCACATCCCGCAGAAGGCGCTTGACCACCGAGCTCCCATCCAAGCCCTCAAGGAT
TGGCAGCACAAACACCCTGACCTGTTTCTACGTCAAGTTTATAATCATCCGGGACCCGACA
ATCCGGCTTCATGCAAACGCCACCACGACACCCAAGATCCGGCGCTATATTCAGCGCTCCGAGAAGACCAACCGCGAGCTGGCCGAGGAGCTTGGCATTG
CGCTGAGCACGGTGCGGATCTGGCGCGCCCGCCAAGACGTCCACGACCGTTCTCACACCCGGCATAATTTGCTAACCACGCTGAGCCCGGCGCAGGAGGC
AATCGCCGTGGAGCTGCGCCGCACACTGCAGCTGCCGCTCGATGATCTGCTTGTGGTGGTGCGCGAGTTCCTCAATCCAGGCGTCTCCCGCTCGGGACTG
GATCGCTGCCTGCGCCGCCATGGGGTCAGCCGGCTGGCGGATCTGCGCCCGGCTGAGCAGGCAAAGCGCCCGAGCAAGGCCTTTAAGGCCTATAGGCCGG
GCTATGTCCATATCGACTACAAATACCTCCCGCAGATGCCCGATGAGACGGCGCGCCGGTATCTGTTTGTGGTCATCGATCGGGCAAGCCGATGGGTTTA
CCTCGAACTCAAGGCGGATAAATCCGCCCGCTCGGCCAGCGCCTTTCTCAAGGCCGTGCGTGAAAAGGCGCCGTTTCGCATCCACCGGCTACTCACTGAC
AACGACAAAGCCTTCACCGACCGTCTGCAGGGCAAACACCGCCAAGCCAGCGGTGAGCATCGCTTTGACCGACTCTGCGCCGAACTCGGTATCGAGCACC
GCCTCGCCCCGGTGCGCCACCCGCAGACCAATGGCATGGTTGAGCGCTTCAACGGGCGCATCAGCGAGGTCTTGGCCACGCATCGCTTCGACTCACGCCA
GGATCTAGAGGCAACCCTCAAACGCTACTGCTACTTGTACAATCATCACATCCCGCAGAAGGCGCTTGACCACCGAGCTCCCATCCAAGCCCTCAAGGAT
TGGCAGCACAAACACCCTGACCTGTTTCTACGTCAAGTTTATAATCATCCGGGACCCGACA
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
968 bp | 322 aa | 94 | 1061 | + | No |
Chemistry : DDE
ORF sequence :
Blast result :
Comments
ISNmo3 is 40% aa similar to IS481v1.
There is no Stop Codon.
There is no Stop Codon.
References
1] Waterbury,J., Ferriera,S., Johnson,J., Kravitz,S., Halpern,A., Remington,K., Beeson,K., Tran,B., Rogers,Y.-H., Friedman,R. and Venter,J.C.(2006) Direct Submission GenBank.