ISFac8
- Family IS256
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
NZ_AABC04000026 | ND | Ferroplasma acidarmanus | Ferroplasma acidarmanus Fer1 |
DNA section
IS Length : 1291 bp
Ends
IR Length : 23/31
IRL : GGTTGTGTATGTAATTTTGTGTAAATATAAACCCCCCTGTTATCAATGAA
IRR : GATTGTGTCCAGAATTCTGTGTATTTATAAAGGATACCGCTTCTGAAACA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|
DNA sequence
GGTTGTGTATGTAATTTTGTGTAAATATAAACCCCCCTGTTATCAATGAATTTAATCATTAAATAACAGGAAAGGATACCTCTTTTGAGCAGAGAGGTAA
CAAAATATGGAAAATACAGATATAAACATATCGGCTCTTTTGAATGTAGATATAGATAAAATACTCAAGCAAACAATAAAGGAGAAAATAGAGAAATTAA
TGGAAATAGAGTTAAATGCATATTTAGAGGAAAATCCAGGAATAAAGAATGGGAAATACAAAAGGGATTTAAAGACAAAGTATGGTGAAATAAAACAATT
AAATGTTCCCAGAGACAGGGATAGCAATTTCCATACACAGGTAATAGAACCATATAACAGATCAATAGGAATGGAAGATCTTATAGTATCAATGTATTCC
AATGGAATATCTACAAGGAGAATAGCAGGTATAATGGAGGATATTTTAGGGAATAAATATTCTAAATCTACTATATCCAGAATAACAGATTTAACCATAG
AAGAGGTTTATAAATTTATTAACAGGCCATTGGACAAAAGGTATATAGCAGTATTCTTAGATGGATTATTCTTCTATTTAAGAAGGGGAAATGTAGATAA
AGAGCCTGTTATATTTGCATTAGGAATAAAAGAAACAGGAGAGTATGAAGTATTAGGGTTCTATTTAACAGTTAAAGAATCACATAATGCATACAAGGAA
GTACTTGAAGATCTGTATAATAGAGGATTAAAGGAGCCATTGTTAATTGTAGCAGATGGAATAAAGAATTTAGATGAGGAAGTAATGGAAATATATCCCC
GATCAGAATTCCAATTGTGTACAATACACTATGCAAGGGGATTAAAATCCAATGTAAGGGAGAAAGATATTGATGAAATAACAATAGATGCGAATAAGAT
GTTTAAATGTGATAATAAGGAAGAAGCTATAATAAGATTTAATGATTTTAAATACAAATGGAAGAGTAAGTATCCTAAAGTTATATACAATACTGAAAAG
AATCTAGGTAAATTATTAAGATTCTATAATTATCCTGTAAATATAAGGAAATCATTGAAATCTACCAATGCCATAGAGAGATTTAACGGAGAAGTAAGGA
GAAGGGTAAAAACAATATCATCATTCCCTGATGAAGATTCAGCAATGAAGGTATTCTATTATAAGTCAATAGAATACAATTCAAAGCATGCATTCAGGAA
GATGAACGGATACTATAAATGCAAGGATGAAATAAAGGAAATGTTTCAGAAGCGGTATCCTTTATAAATACACAGAATTCTGGACACAATC
CAAAATATGGAAAATACAGATATAAACATATCGGCTCTTTTGAATGTAGATATAGATAAAATACTCAAGCAAACAATAAAGGAGAAAATAGAGAAATTAA
TGGAAATAGAGTTAAATGCATATTTAGAGGAAAATCCAGGAATAAAGAATGGGAAATACAAAAGGGATTTAAAGACAAAGTATGGTGAAATAAAACAATT
AAATGTTCCCAGAGACAGGGATAGCAATTTCCATACACAGGTAATAGAACCATATAACAGATCAATAGGAATGGAAGATCTTATAGTATCAATGTATTCC
AATGGAATATCTACAAGGAGAATAGCAGGTATAATGGAGGATATTTTAGGGAATAAATATTCTAAATCTACTATATCCAGAATAACAGATTTAACCATAG
AAGAGGTTTATAAATTTATTAACAGGCCATTGGACAAAAGGTATATAGCAGTATTCTTAGATGGATTATTCTTCTATTTAAGAAGGGGAAATGTAGATAA
AGAGCCTGTTATATTTGCATTAGGAATAAAAGAAACAGGAGAGTATGAAGTATTAGGGTTCTATTTAACAGTTAAAGAATCACATAATGCATACAAGGAA
GTACTTGAAGATCTGTATAATAGAGGATTAAAGGAGCCATTGTTAATTGTAGCAGATGGAATAAAGAATTTAGATGAGGAAGTAATGGAAATATATCCCC
GATCAGAATTCCAATTGTGTACAATACACTATGCAAGGGGATTAAAATCCAATGTAAGGGAGAAAGATATTGATGAAATAACAATAGATGCGAATAAGAT
GTTTAAATGTGATAATAAGGAAGAAGCTATAATAAGATTTAATGATTTTAAATACAAATGGAAGAGTAAGTATCCTAAAGTTATATACAATACTGAAAAG
AATCTAGGTAAATTATTAAGATTCTATAATTATCCTGTAAATATAAGGAAATCATTGAAATCTACCAATGCCATAGAGAGATTTAACGGAGAAGTAAGGA
GAAGGGTAAAAACAATATCATCATTCCCTGATGAAGATTCAGCAATGAAGGTATTCTATTATAAGTCAATAGAATACAATTCAAAGCATGCATTCAGGAA
GATGAACGGATACTATAAATGCAAGGATGAAATAAAGGAAATGTTTCAGAAGCGGTATCCTTTATAAATACACAGAATTCTGGACACAATC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1161 bp | 386 aa | 107 | 1267 | + | No |
Chemistry : DDE
ORF sequence :
MENTDINISALLNVDIDKILKQTIKEKIEKLMEIELNAYLEENPGIKNGKYKRDLKTKYGEIKQLNVPRDRDSNFHTQVIEPYNRSIGMEDLIVSMYSNG
ISTRRIAGIMEDILGNKYSKSTISRITDLTIEEVYKFINRPLDKRYIAVFLDGLFFYLRRGNVDKEPVIFALGIKETGEYEVLGFYLTVKESHNAYKEVL
EDLYNRGLKEPLLIVADGIKNLDEEVMEIYPRSEFQLCTIHYARGLKSNVREKDIDEITIDANKMFKCDNKEEAIIRFNDFKYKWKSKYPKVIYNTEKNL
GKLLRFYNYPVNIRKSLKSTNAIERFNGEVRRRVKTISSFPDEDSAMKVFYYKSIEYNSKHAFRKMNGYYKCKDEIKEMFQKRYPL
ISTRRIAGIMEDILGNKYSKSTISRITDLTIEEVYKFINRPLDKRYIAVFLDGLFFYLRRGNVDKEPVIFALGIKETGEYEVLGFYLTVKESHNAYKEVL
EDLYNRGLKEPLLIVADGIKNLDEEVMEIYPRSEFQLCTIHYARGLKSNVREKDIDEITIDANKMFKCDNKEEAIIRFNDFKYKWKSKYPKVIYNTEKNL
GKLLRFYNYPVNIRKSLKSTNAIERFNGEVRRRVKTISSFPDEDSAMKVFYYKSIEYNSKHAFRKMNGYYKCKDEIKEMFQKRYPL
Blast result :
Comments
References
1] Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,C., Glavina,T., Hammon,N., Israni,S., Pitluck,S. and Richardson,P. (2003) Direct submission GenBank