ISFac7
- Family IS256
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
NZ_AABC04000020 | ND | Ferroplasma acidarmanus | Ferroplasma acidarmanus Fer1 |
DNA section
IS Length : 1254 bp
Ends
IR Length : 31/39
IRL : GATAGTGTAAGTAATTGTCTGTAAATTATAAATGGCCTTGCACAATTTAG
IRR : GATAATGTACATTATTTTCTGTAAATTGTAAATAGCCTTACTGACTGTTG
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
TTTTACTATTAAATATT | AATATTTA | AATTATAAGCTAT | 8 |
DNA sequence
GATAGTGTAAGTAATTGTCTGTAAATTATAAATGGCCTTGCACAATTTAGATTGGGGTGAAAAAAGTGCAAGACCAATTAAAAGAAGTAAAAGAAAAGAT
AAAAAGTTATGGATTGAACAGGGAGAATATGAGAGATTTAAAGAAATGGATTCTTAATGATCTCATGAATGAGGAAGCAGAGGAACAGATCAATGCATCC
AGGTATGAGAGAAATAGCAATAGAAAGGATTACAGGAATGGGTATAAGCAGAGATCATTGTTAACAACAGATGGAAAGGTTATATTAGATAAGCCACAGT
TCAGGGAAACATCTTTCCATACAGCTGTATTTGACAATTATTCCAGAGTAGAAAAATCAGTAGAATCCATAATACTGGAATCATACCTGAGCGGTGTATC
TACAAGAAGCGTTAATAAGGTAATAAAATCCTTAGGCATAGAAGTATCACCATCCTATGTGTCATCATTATCCTCAAGGCTTGATAAAACAGTAAATGAA
TTCCTTGAAAGGAAGATTGATGGAGAATATAAATTCATATATATAGATGGAACATACCTTAAAATAAGAAATAATGGGAGGTACAGGAATAAGGCAATAT
ACATCTGTGTAGGGATTAACAGTGATGGATATCGTGAAGTTCTTGGAGCAAGAATATATGACTCTGAAACTGAAATAGAGTGGGAACTATTCTTTGATGA
TCTTAAGGATAGGGGATTGAATGGTGTTGAGATGGTAATATCAGATGGCAATAAGGGTATTAGGGAAGCAGTTAAACAGTCATTCCCTGGATCATCTTGG
CAATACTGCCATGTCCATTTTATGAGGAACTTAAGGAAATCAACGGGAAAACAGCAATGGAAGTTTCTATCATTGCTTATAAAACAGGCACTGGATAATC
CTGATATACTCCCTTTACTGCAGGATAAGCTTTTTGATAGAGGATTAGATAAATGTTCTACTATGTTCGATAAATACTATGATTCATTATACAACTACAG
ATCATTCAATACAAATATACAGGGATTAAGGAGATTAAGAGTATCCAATACTATAGAACGTTTAAATGCAGAAATAAAAAGAAGGACTAAGAAAATAGGC
GCATTTCCATCTGATGATTCTGCAATGAGATTGGCAGGCTCAATAATGATGGACATAAATGAGGAGTATGTAACAGGAAGAAAATATATAAATATGGAGG
AAATCAACAGTCAGTAAGGCTATTTACAATTTACAGAAAATAATGTACATTATC
AAAAAGTTATGGATTGAACAGGGAGAATATGAGAGATTTAAAGAAATGGATTCTTAATGATCTCATGAATGAGGAAGCAGAGGAACAGATCAATGCATCC
AGGTATGAGAGAAATAGCAATAGAAAGGATTACAGGAATGGGTATAAGCAGAGATCATTGTTAACAACAGATGGAAAGGTTATATTAGATAAGCCACAGT
TCAGGGAAACATCTTTCCATACAGCTGTATTTGACAATTATTCCAGAGTAGAAAAATCAGTAGAATCCATAATACTGGAATCATACCTGAGCGGTGTATC
TACAAGAAGCGTTAATAAGGTAATAAAATCCTTAGGCATAGAAGTATCACCATCCTATGTGTCATCATTATCCTCAAGGCTTGATAAAACAGTAAATGAA
TTCCTTGAAAGGAAGATTGATGGAGAATATAAATTCATATATATAGATGGAACATACCTTAAAATAAGAAATAATGGGAGGTACAGGAATAAGGCAATAT
ACATCTGTGTAGGGATTAACAGTGATGGATATCGTGAAGTTCTTGGAGCAAGAATATATGACTCTGAAACTGAAATAGAGTGGGAACTATTCTTTGATGA
TCTTAAGGATAGGGGATTGAATGGTGTTGAGATGGTAATATCAGATGGCAATAAGGGTATTAGGGAAGCAGTTAAACAGTCATTCCCTGGATCATCTTGG
CAATACTGCCATGTCCATTTTATGAGGAACTTAAGGAAATCAACGGGAAAACAGCAATGGAAGTTTCTATCATTGCTTATAAAACAGGCACTGGATAATC
CTGATATACTCCCTTTACTGCAGGATAAGCTTTTTGATAGAGGATTAGATAAATGTTCTACTATGTTCGATAAATACTATGATTCATTATACAACTACAG
ATCATTCAATACAAATATACAGGGATTAAGGAGATTAAGAGTATCCAATACTATAGAACGTTTAAATGCAGAAATAAAAAGAAGGACTAAGAAAATAGGC
GCATTTCCATCTGATGATTCTGCAATGAGATTGGCAGGCTCAATAATGATGGACATAAATGAGGAGTATGTAACAGGAAGAAAATATATAAATATGGAGG
AAATCAACAGTCAGTAAGGCTATTTACAATTTACAGAAAATAATGTACATTATC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1152 bp | 383 aa | 66 | 1217 | + | No |
Chemistry : DDE
ORF sequence :
MQDQLKEVKEKIKSYGLNRENMRDLKKWILNDLMNEEAEEQINASRYERNSNRKDYRNGYKQRSLLTTDGKVILDKPQFRETSFHTAVFDNYSRVEKSVE
SIILESYLSGVSTRSVNKVIKSLGIEVSPSYVSSLSSRLDKTVNEFLERKIDGEYKFIYIDGTYLKIRNNGRYRNKAIYICVGINSDGYREVLGARIYDS
ETEIEWELFFDDLKDRGLNGVEMVISDGNKGIREAVKQSFPGSSWQYCHVHFMRNLRKSTGKQQWKFLSLLIKQALDNPDILPLLQDKLFDRGLDKCSTM
FDKYYDSLYNYRSFNTNIQGLRRLRVSNTIERLNAEIKRRTKKIGAFPSDDSAMRLAGSIMMDINEEYVTGRKYINMEEINSQ
SIILESYLSGVSTRSVNKVIKSLGIEVSPSYVSSLSSRLDKTVNEFLERKIDGEYKFIYIDGTYLKIRNNGRYRNKAIYICVGINSDGYREVLGARIYDS
ETEIEWELFFDDLKDRGLNGVEMVISDGNKGIREAVKQSFPGSSWQYCHVHFMRNLRKSTGKQQWKFLSLLIKQALDNPDILPLLQDKLFDRGLDKCSTM
FDKYYDSLYNYRSFNTNIQGLRRLRVSNTIERLNAEIKRRTKKIGAFPSDDSAMRLAGSIMMDINEEYVTGRKYINMEEINSQ
Blast result :
Comments
ISFac7 is 68% aa similar to ISMma16.
References
1] Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,C., Glavina,T., Hammon,N., Israni,S., Pitluck,S. and Richardson,P. (2003) Direct submission GenBank