ISFac7

  • Family IS256
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
NZ_AABC04000020 ND Ferroplasma acidarmanus
Ferroplasma acidarmanus Fer1
DNA section
IS Length : 1254 bp

Ends


IR Length : 31/39

IRL : GATAGTGTAAGTAATTGTCTGTAAATTATAAATGGCCTTGCACAATTTAG
IRR : GATAATGTACATTATTTTCTGTAAATTGTAAATAGCCTTACTGACTGTTG

Insertion site


Left flankDirect repeatRight flankDR Length
TTTTACTATTAAATATTAATATTTAAATTATAAGCTAT8

DNA sequence

GATAGTGTAAGTAATTGTCTGTAAATTATAAATGGCCTTGCACAATTTAGATTGGGGTGAAAAAAGTGCAAGACCAATTAAAAGAAGTAAAAGAAAAGAT
AAAAAGTTATGGATTGAACAGGGAGAATATGAGAGATTTAAAGAAATGGATTCTTAATGATCTCATGAATGAGGAAGCAGAGGAACAGATCAATGCATCC
AGGTATGAGAGAAATAGCAATAGAAAGGATTACAGGAATGGGTATAAGCAGAGATCATTGTTAACAACAGATGGAAAGGTTATATTAGATAAGCCACAGT
TCAGGGAAACATCTTTCCATACAGCTGTATTTGACAATTATTCCAGAGTAGAAAAATCAGTAGAATCCATAATACTGGAATCATACCTGAGCGGTGTATC
TACAAGAAGCGTTAATAAGGTAATAAAATCCTTAGGCATAGAAGTATCACCATCCTATGTGTCATCATTATCCTCAAGGCTTGATAAAACAGTAAATGAA
TTCCTTGAAAGGAAGATTGATGGAGAATATAAATTCATATATATAGATGGAACATACCTTAAAATAAGAAATAATGGGAGGTACAGGAATAAGGCAATAT
ACATCTGTGTAGGGATTAACAGTGATGGATATCGTGAAGTTCTTGGAGCAAGAATATATGACTCTGAAACTGAAATAGAGTGGGAACTATTCTTTGATGA
TCTTAAGGATAGGGGATTGAATGGTGTTGAGATGGTAATATCAGATGGCAATAAGGGTATTAGGGAAGCAGTTAAACAGTCATTCCCTGGATCATCTTGG
CAATACTGCCATGTCCATTTTATGAGGAACTTAAGGAAATCAACGGGAAAACAGCAATGGAAGTTTCTATCATTGCTTATAAAACAGGCACTGGATAATC
CTGATATACTCCCTTTACTGCAGGATAAGCTTTTTGATAGAGGATTAGATAAATGTTCTACTATGTTCGATAAATACTATGATTCATTATACAACTACAG
ATCATTCAATACAAATATACAGGGATTAAGGAGATTAAGAGTATCCAATACTATAGAACGTTTAAATGCAGAAATAAAAAGAAGGACTAAGAAAATAGGC
GCATTTCCATCTGATGATTCTGCAATGAGATTGGCAGGCTCAATAATGATGGACATAAATGAGGAGTATGTAACAGGAAGAAAATATATAAATATGGAGG
AAATCAACAGTCAGTAAGGCTATTTACAATTTACAGAAAATAATGTACATTATC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1152 bp383 aa661217+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MQDQLKEVKEKIKSYGLNRENMRDLKKWILNDLMNEEAEEQINASRYERNSNRKDYRNGYKQRSLLTTDGKVILDKPQFRETSFHTAVFDNYSRVEKSVE
SIILESYLSGVSTRSVNKVIKSLGIEVSPSYVSSLSSRLDKTVNEFLERKIDGEYKFIYIDGTYLKIRNNGRYRNKAIYICVGINSDGYREVLGARIYDS
ETEIEWELFFDDLKDRGLNGVEMVISDGNKGIREAVKQSFPGSSWQYCHVHFMRNLRKSTGKQQWKFLSLLIKQALDNPDILPLLQDKLFDRGLDKCSTM
FDKYYDSLYNYRSFNTNIQGLRRLRVSNTIERLNAEIKRRTKKIGAFPSDDSAMRLAGSIMMDINEEYVTGRKYINMEEINSQ

 

Blast result :
Comments
ISFac7 is 68% aa similar to ISMma16.
References
1] Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,C., Glavina,T., Hammon,N., Israni,S., Pitluck,S. and Richardson,P. (2003) Direct submission GenBank