ISAba825

  • Family IS982
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
AY751532 ND Acinetobacter baumannii
Acinetobacter baumannii
DNA section
IS Length : 975 bp

Ends


IR Length : 17

IRL : ACGCCAATCTCAACTTTTTAAGTCATTGAAATAAAAAGGACATAACCTCA
IRR : ACGCCAATCTCAACTTTAAATAAGCTTTTCAAATTGAATCGGCGAATAAC

Insertion site


Left flankDirect repeatRight flankDR Length
CATTTATATTTATCATCGTTAGCAATTTTACGAGCTTC7

DNA sequence

ACGCCAATCTCAACTTTTTAAGTCATTGAAATAAAAAGGACATAACCTCATTTTAAATCCGTCTATGAAAATAAAATTACAGTTATGTCCACTGAAGAAT
TTATCATCATTGTCTATTTAATCATAGAGGAAATTTACCCAACTATAGTCTCTGAACCATTAAGAAAACGTGGTTTTCCACCTGCTTTAACCGATATTGA
AATTATCACAATGCAAATTGTTGGTGAGTGTCTCAAAATGGATACGGATAAAAGCATATGGATGTTTTTTAAAAACAATTACTTAAGTTGGTTCCCTCAT
TTAGGTTCATATCCTAACTTTTGTAAGCATTGTGCAAACTTATGGCAAGTTCATCAAAAAATCACAGCCCAATTAACTGCACATTATGGTCAGGATCATA
TTCATTTTATTGATGGATTTCCTATACCTGTTTGTCGTTATAGTCGAGCAAAAAGACACAAGAATTTCAAAGAACATGCAGGTTTTAGTTATTGTGCTGC
ACAACAAGAGAAATACTATGGTTTTAAAGGGCATCTTGTAATTAATTTGGAGGGTATGATTACTGGCTATACTTTCGCTCCAGCAAATGTAGATGAGCGT
GATGTTGCACCAGAAATCACAGAAAATATTCATGGGTTACTAGGTGCAGATAAAGGCTACTTAAGACCCAGCTTAAAAGAATACTATAAATTTCAGTATG
TTGATCTACAAACTCCTTTAAGAAAGAATATGCCGGACTCTAGATCTCAAGAATCAATGAGGTTGCTTATGAGAGCACGAAGGAAAATTGAAACGGTCAT
TGGTCAATTAACTGATCGCTTTAATATTCAAAAAGTAAGGGCAAGAGATTTATGGCACTTATCGCATCGTTTTATCAGAAAGATTTTGTCACATACGGTC
TGCGTCGTTATGAATAAAAAATGTGGTTATTCGCCGATTCAATTTGAAAAGCTTATTTAAAGTTGAGATTGGCGT
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
876 bp291 aa85960+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MSTEEFIIIVYLIIEEIYPTIVSEPLRKRGFPPALTDIEIITMQIVGECLKMDTDKSIWMFFKNNYLSWFPHLGSYPNFCKHCANLWQVHQKITAQLTAH
YGQDHIHFIDGFPIPVCRYSRAKRHKNFKEHAGFSYCAAQQEKYYGFKGHLVINLEGMITGYTFAPANVDERDVAPEITENIHGLLGADKGYLRPSLKEY
YKFQYVDLQTPLRKNMPDSRSQESMRLLMRARRKIETVIGQLTDRFNIQKVRARDLWHLSHRFIRKILSHTVCVVMNKKCGYSPIQFEKLI

 

Blast result :
Comments
ISAba825 is 51% aa similar to ISra1. The "carO" gene is disrupted by ISAba825 insertion.
References
1] Mussi,M.A., Limansky,A.S. and Viale,A.M.(2005) Antimicrob. Agents Chemother. 49 (4), 1432-1440