Organism

Bacillus halodurans C-125
Chromosome
 Size: 4202352 bp

Accession Number: NC_002570
Pubmed: 11058132

Bacteria /Firmicutes /Bacillales /Bacillaceae /Bacillus /Bacillus halodurans C-125 /
Relevant Replicons and Strains

ISs Number Total ISs (bp) % of Genome
Full ISs 85 119614 2.85
Partial ISs 84 23096 0.55
Total 169 142710 3.39

The table below gives a list of all ISs in this replicon.
Click on a name to obtain details of the IS

All_Iss
IS Family Group Strand Full IS
Coordinates		 Length (bp) Partial IS
Coordinates		 Partial IS
Coordinates
on IS		 Comments
Name Begin End Begin End Begin End
IS660 IS1182 . - - - - 36036 35964 1891 1963 Partial
IS660 IS1182 . - - - - 36109 36057 271 323 Partial
IS660 IS1182 . - - - - 36223 36169 23 77 Partial
IS663 IS1182 . + - - - 58358 58553 1 196 Partial
IS651 ISL3 . + 108015 109398 1384 - - - - -
IS651 ISL3 . + 153091 154475 1385 - - - - Mutations at positions 12 G-->D, 202 T-->A and 301 R-->Q.
IS657 IS200/IS605 IS200 + 194139 194872 734 - - - - -
IS651 ISL3 . + 267837 269220 1384 - - - - -
IS657 IS200/IS605 IS200 + 290906 291639 734 - - - - -
IS651 ISL3 . + 291645 293028 1384 - - - - -
IS656 IS1182 . - 297572 296015 1558 - - - - .
IS653 IS110 . - - - - 307899 307875 1780 1804 Partial
IS654 IS256 . + 330156 331539 1384 - - - - -
IS655 IS3 . + 356320 357540 1221 - - - - -
IS651 ISL3 . + - - - 369783 369939 1 163 Partial
IS654 IS256 . + 381025 382408 1384 - - - - -
IS651 ISL3 . + 408634 410017 1384 - - - - -
IS654 IS256 . - 416677 415294 1384 - - - - .
IS651 ISL3 . + - - - 443591 443631 1 41 Partial
IS651 ISL3 . + 443639 445022 1384 - - - - Mutations at positions 270 R-->G, 301 R-->Q and 333 R-->P.
IS653 IS110 . + 461220 463024 1805 - - - - -
IS641 IS4 IS4Sa - - - - 464043 463516 567 1109 Part of the transposase (212 to 300). Partial
IS660 IS1182 . - - - - 486647 486165 1963 1474 Partial
IS660 IS1182 . - - - - 487037 486648 1 390 Partial
IS651 ISL3 . - 722771 721388 1384 - - - - Mutations at positions 270 R-->G, 301 R-->Q and 333 R-->P.
IS663 ISNCY . + 736789 738768 1980 - - - - -
IS663 IS1182 . + - - - 743724 743778 1 55 Partial
IS654 IS256 . + - - - 743779 743954 1 179 First part of IS654
IS655 IS3 . + 743955 745175 1221 - - - - -
IS654 IS256 . + - - - 745176 746383 177 1384 Shorter than IS654A.Partial_IS. Second Part of IS.
IS641 IS4 IS4Sa - 747990 746586 1405 - - - - .
IS660 IS1182 . + - - - 828863 828987 36 160 Partial
IS660 IS1182 . + - - - 828987 829685 362 1051 Partial
IS660 IS1182 . + - - - 829686 829851 1422 1587 Partial
IS651 ISL3 . + - - - 829916 830032 61 178 Partial
IS651 ISL3 . - 832242 830857 1386 - - - - .
IS641B IS4 . + - - - 834052 835089 1 1038 Shorter than IS641A, only 311 aa.Partial_IS First part of IS641B
IS641B IS4 . + - - - 835072 835180 1295 1405 -
IS660 IS1182 . - - - - 901556 901286 1963 1689 Partial
IS660 IS1182 . - - - - 901738 901557 1663 1480 Partial
IS660 IS1182 . - - - - 902133 901755 382 1 Partial
IS654 IS256 . + 988291 989674 1384 - - - - -
IS652 ISL3 . - 1026946 1025486 1461 - - - - .
IS656 IS1182 . - 1059284 1057727 1558 - - - - .
IS653 IS110 . + 1069354 1071158 1805 - - - - -
IS651 ISL3 . + 1126321 1127704 1384 - - - - -
IS660 IS1182 . + 1130785 1132747 1963 - - - - Note : the transposase is very long !
IS651 ISL3 . + 1267249 1268633 1385 - - - - -
IS652 ISL3 . - 1279163 1277703 1461 - - - - .
IS651 ISL3 . - - - - 1279214 1279174 41 1 Partial
IS653 IS110 . - 1301549 1299745 1805 - - - - .
IS653 IS110 . + 1391849 1393653 1805 - - - - "The first bp is different ""C"" instead of ""T""."
IS651 ISL3 . + 1397716 1399099 1384 - - - - -
IS652 ISL3 . - 1423749 1422289 1461 - - - - .
IS651 ISL3 . + 1433045 1434428 1384 - - - - -
IS651 ISL3 . + - - - 1465616 1465656 1 41 Partial
IS651 ISL3 . + - - - 1465665 1466150 1 520 First part of the transposase (1 to 119). Partial
IS651 ISL3 . + 1497488 1498871 1384 - - - - -
IS660 IS1182 . - 1516581 1514619 1963 - - - - Homology only with a part of the transposase (1 to 574).
IS660 IS1182 . - - - - 1516623 1516580 1860 1903 Partial
IS660 IS1182 . - - - - 1516781 1516616 167 1 Partial
IS652D ISL3 . + 1552703 1554163 1461 - - - - Part of the transposase (25 to 404).
IS651 ISL3 . + 1621997 1623380 1384 - - - - Mutations at positions 270 R-->G, 301 R-->Q and 333 R-->P.
IS653 IS110 . + 1625586 1627390 1805 - - - - -
IS657 IS200/IS605 IS200 + 1718440 1719173 734 - - - - -
IS652 ISL3 . + 1757990 1759450 1461 - - - - -
IS652 ISL3 . - 1777905 1776445 1461 - - - - Mutation at position 390 I-->L.
IS660 IS1182 . - - - - 1974189 1974095 1963 1867 Partial
IS657 IS200/IS605 IS200 + 1981014 1981747 734 - - - - -
IS660 IS1182 . + - - - 1988144 1989106 1 962 Partial
IS651 ISL3 . + 2019703 2021087 1385 - - - - Mutations at positions 12 G-->D, 202 T-->A and 301 R-->Q.
IS651 ISL3 . + 2042186 2043569 1384 - - - - -
IS652 ISL3 . - 2059362 2057902 1461 - - - - .
IS660 IS1182 . - 2192598 2190636 1963 - - - - Homology only with a part of the transposase (1 to 571).
IS654 IS256 . - 2217156 2215773 1384 - - - - .
IS660 IS1182 . + - - - 2227035 2227158 1840 1963 Partial
IS660 IS1182 . - - - - 2279682 2279303 1963 1582 Partial
IS660 IS1182 . - - - - 2279779 2279683 1194 1098 Partial
IS660 IS1182 . - - - - 2279873 2279770 895 1001 Partial
IS660 IS1182 . - - - - 2279980 2279922 20 78 Partial
IS651 ISL3 . - - - - 2281124 2280664 1372 889 Part of the transposase (59 to 131).Partial_IS Partial
IS651 ISL3 . - - - - 2280704 2280668 1332 1368 Partial
IS651 ISL3 . - - - - 2281135 2280740 370 1275 Partial
IS651 ISL3 . - - - - 2281463 2281126 339 1 Partial
IS652 ISL3 . - 2326009 2324549 1461 - - - - .
IS660 IS1182 . + - - - 2393633 2393728 1871 1963 Partial
IS660 IS1182 . + - - - 2428054 2428119 1897 1963 Partial
IS655 IS3 . + 2462717 2463937 1221 - - - - -
IS652 ISL3 . - 2497940 2496480 1461 - - - - .
IS652 ISL3 . - 2592318 2590857 1462 - - - - Insertion of one bp (G) between positions 1378 and 1379.
IS652 ISL3 . - 2598248 2596788 1461 - - - - .
IS651 ISL3 . - - - - 2631819 2631783 37 1 Partial
IS642 IS630 . - 2642665 2641524 1142 - - - - .
Partial IS630 . - - - - 2642586 2642065 - - .
IS658 IS30 . + 2645543 2646600 1058 - - - - -
IS652 ISL3 . + 2761230 2762690 1461 - - - - -
IS652 ISL3 . - 2773264 2771804 1461 - - - - .
IS656 IS1182 . + 2815431 2816988 1558 - - - - -
IS651 ISL3 . - 2901115 2899733 1383 - - - - Note that peptide is longer than the IS ?
IS658 IS30 . - - - - 2930699 2930643 706 650 Partial
IS658 IS30 . - - - - 2930799 2930698 612 511 Partial
IS658 IS30 . - - - - 2930917 2930799 119 1 Partial
IS660 IS1182 . - - - - 2962519 2960603 1963 47 Homology only with a part of the trnasposase (1 to 566). Partial_IS First part of IS660
IS657 IS200/IS605 IS200 - 2963254 2962521 734 - - - - .
IS660 IS1182 . - - - - 2963301 2963255 47 1 .
IS651 ISL3 . - - - - 2993523 2993505 1366 1384 IRR Partial_IS Partial
IS652 ISL3 . - 3037236 3035776 1461 - - - - .
IS654 IS256 . + 3085373 3086756 1384 - - - - -
IS660 IS1182 . + - - - 3086975 3087052 1 78 Partial
IS660 IS1182 . + - - - 3087120 3087364 81 328 Partial
IS660 IS1182 . + - - - 3087365 3087664 1605 1942 Partial
IS651 ISL3 . + 3087665 3089048 1384 - - - - "Mutations at position 270 R-->G, 301 R-->Q and 333 R-->P.
IS652O ISL3 . + 3098552 3100012 1461 - - - - -
IS660 IS1182 . - - - - 3140973 3140938 36 1 Partial
IS660 IS1182 . + - - - 3152207 3152273 10 76 Partial
IS660 IS1182 . + - - - 3152329 3152412 84 167 Partial
IS660 IS1182 . + - - - 3152405 3152508 1860 1963 Partial
IS657 IS200/IS605 IS200 - - - - 3227597 3227529 302 232 Partial
IS657 IS200/IS605 IS200 - - - - 3227654 3227598 83 27 Partial
IS651 ISL3 . - 3252976 3251593 1384 - - - - .
IS660 IS1182 . - - - - 3301918 3301436 1963 1474 Partial
IS660 IS1182 . - - - - 3302232 3301921 78 388 Partial
IS660 IS1182 . - - - - 3302371 3302297 1 78 IRL Partial_IS Partial
IS660 IS1182 . - - - - 3306198 3305849 78 417 Partial
IS660 IS1182 . - - - - 3306337 3306263 1 78 Partial
IS657 IS200/IS605 IS200 - 3353480 3352747 734 - - - - .
IS652 ISL3 . + 3367581 3369041 1461 - - - - -
IS652 ISL3 . - 3523785 3522325 1461 - - - - .
IS655 IS3 . - 3531061 3529841 1221 - - - - .
IS660 IS1182 . - - - - 3548306 3548266 41 1 Partial
IS660 IS1182 . + - - - 3548412 3549001 78 670 Partial
IS660 IS1182 . + - - - 3549014 3549093 864 943 Partial
IS660 IS1182 . + - - - 3549103 3549198 1867 1962 Partial
IS655 IS3 . - 3557299 3556079 1221 - - - - .
IS654 IS256 . - 3571327 3569944 1384 - - - - .
IS653 IS110 . + 3573034 3574838 1805 - - - - -
IS643 IS21 . - - - - 3575868 3575736 2353 2485 Partial
IS657 IS200/IS605 IS200 - 3577225 3576492 734 - - - - .
IS657 IS200/IS605 IS200 - 3587914 3587181 734 - - - - .
IS651 ISL3 . - 3608195 3606812 1384 - - - - Mutations at positions 270 R-->G, 301 R-->Q and 333 R-->P.
IS658 IS30 . - 3612455 3611398 1058 - - - - .
IS652 ISL3 . - 3617645 3616185 1461 - - - - .
IS652 ISL3 . - 3668212 3666752 1461 - - - - .
IS651 ISL3 . - 3688031 3686647 1385 - - - - Part of the transposase (1 to 174).
IS663 IS1182 . + - - - 3678890 3678909 1961 1980 Partial
IS660 IS1182 . + - - - 3713541 3713608 11 78 Partial
IS660 IS1182 . + - - - 3713673 3714138 78 554 Partial
IS660 IS1182 . + - - - 3714138 3714240 1861 1963 Partial
IS656 IS1182 . - 3737150 3735593 1558 - - - - .
IS654 IS256 . - 3777386 3776003 1384 - - - - .
IS653 IS110 . - 3825941 3824137 1805 - - - - .
IS660 IS1182 . + - - - 3856206 3856237 5 35 Partial
IS660 IS1182 . + - - - 3856349 3856433 83 166 Partial
IS651 ISL3 . - 3874559 3873177 1383 - - - - "Longer than those of IS651A.
IS663 IS1182 . - - - - 3941342 3941327 1 16 Partial
IS660 IS1182 . + - - - 4083577 4083650 1 77 Partial
IS660 IS1182 . + - - - 4083727 4083772 437 482 Partial
IS658 IS30 . + 4089049 4090106 1058 - - - - -
IS643 IS21 . + 4105038 4107522 2485 - - - - -
IS662 IS1182 . - - - - 4120852 4120823 1 30 Partial
IS662 ISNCY . - 4124940 4123375 1566 - - - - .
Partial IS1380 . + - - - 4125095 4126411 - - -
Partial IS21 . + - - - 4135576 4137075 - - -
Partial IS21 . + - - - 4137075 4137800 - - -
IS643 IS21 . + - - - 4137869 4138647 1707 2485 ORF2 Partial
IS662 ISNCY . + - - - 4144220 4144818 1 599 Part of the transposase (1 to 162). Partial
IS662 ISNCY . + - - - 4144820 4145301 1085 1566 End of the transposase (367 to 454). Partial
IS650 IS110 . - - - - 4177119 4176982 1928 1791 Partial
IS650 IS110 . - 4181061 4179133 1929 - - - - .