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| Name: TnXax1.3 (Synonyms: Tn7209) |
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| Family: Tn3 Group: Tn4651 |
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| Evidence of Transposition: no |
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| Host |
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| Host Organism: | Xanthomonas euvesicatoria 75-3 | | |
| | Date of Isolation: | 2003 |
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| Map |
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| Terminal Inverted Repeats (IR) |
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| IRL (Length: 46 bp) |  | GAGGGTCGGCAGGGATTCGTGTAAAAGACAGCCAAAAGTGAGCTAA |
| IRR (Length: 45 bp) | | GAGGGTCGACAGGGATTTGTGTAAAAAACAGCCAAAATTGAGCTA |
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| Sequence |
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--------10 --------20 --------30 --------40 --------50 --------60 --------70 --------80 --------90 -------100
ATCGATCGGC AGGCGCTTCA AAGACCCGAG CCAGTTTGCG GGCGCTGAGC GCGTCTGAGG GTCGGCAGGG ATTCGTGTAA AAGACAGCCA AAAGTGAGCT 100
AACTCGCTGT CATCAAAGAA TTTTTCACAA CCTTTCGCCG ATCGTCCATG CGGGTCCGGG ATCGCCTCCA TGTCTGCGCC TCACCCCGGT CGTCGAGGGT 200
TGCCAGGATC ACCCGAAGTT GTGTACTGCC ATGCGGCCTC GGAAGCTATG TAGTCGCCCC TGAAAAACCC CCAGACCACA TCCATTGCAA GGCTTCATCT 300
GCGTTATCGG TGTGCTGGAA TTGCCAGTTT TCGTTACGCT ACGTCCTGGT TTCTGGCAGT TTTCGCCCAT GCGTACACGG CGTCCTGCCG CCGAGCAGTT 400
GCCTGCCGAT GAGCTGTTTC GTTCGCGTCT GGAGAACCAG ATCGACTTGC GCCATCCACT GGTCCAGCTG ATTCATCGGC TGCCGTGGAG TGCGTTGGAG 500
CAGGCGCTGT CGCCGCGGTT GCCGGCTACC CCCGGCACAG GCGGTCGGCC CGCACTGCCG GTGCGCCTGA TCGCCGGCTT GCTCTACCTC AAGCACGCCT 600
ACGGCCTGTC CGATGAAGCG GTGTGCGAGC GCTGGCTGGA AAATCCTTAT TGGCAGTTCT TCACCGGTGA GGTGGTGTTC CAGACCTGCT TGCCGTGCGA 700
TCCCAGCTCC CTGACACGTT GGCGACAGCG CCTGGGCGAA GCCGGGATGG AAGAGCTGTT GGCGCACACC ATCAACACCG CTCATGTGAT GAAGGCAGTG 800
GATGGTAATC CCCCCATCCC CAGCATCGGA GATGGGGGGA TGCGCTATTT GCCATATGGC TTGCTAGAGA AACGTCTTCA CCATTCAATT GCTAGGGGCA 900
TCACGATTGT TTCGAGCCTC TGCCCAACTA AAGTTCCGTG ATTTTAGATA CAACACGGGT TGGCACCCCG TCGACATCAA TTTCCCTGCC CACGTCGTCA 1000
CGCTGCGCGT TGACGATCAC CCCCTTGAGT ACACGGCTCT TTGGCTCCGC AACACTCTTT AATTGCTTGA TATCGGAGGG TTGATCGCCG TAAGAGGTTA 1100
TCGGCACATT AGGTTGAACC GAGAGCCGCT CAAGGCTCTC TGCCAATCTC GTTGAATCTG GTTTTTTGTC GATCCGTTCA ATGGTCGTGG AATCCGGATG 1200
GGCGTAAATT GCTGCCTCTG AAAGAGTAGC CCGTAGTGCT TCTTCGTCAC TGCCATTCAA TGAATTGATA AGTCGCTTCT GCAAATCTTC AGGCATTTGA 1300
GAAGGGGGCA AATGCGACTT TTCAAGGGTG ACTTCTTCCG CGCCGGACAC CACGTCAAAG TAGTGCATCA TGCCAAGATG ATTGATCTCG TTTTCCAAAT 1400
CGCCATGGCC GCGATTACTG ATCAATATGA CGCGAGAATT CGCATTGCGT GATTTCTCCA GAATTTCTTT TGCGCCAGGA AGTAGGGAAA GCTCAATATC 1500
CGGGAACGGA ACATCTCGAC TATAATTTTT TTTCGAAACT TCCGGCTTTA CTAGCATTTT ATATTCGCGG ACAAAGTTAG AGTATACGGC ATTATTTATC 1600
GACGCTGCTT TATGCTCAGA AATTCCTGGG AGCATTTTCC GAACAAAATC TTCAATTATG TGGCGCTTAT ATATGCTTTG CCTACCCATC AAATAAGATG 1700
AAAAGTCTTT TTGATTTTTC ATCAGCAATG GCGCTTCCTC GTCGACCGGT TCTGCACCGT TCAACTTGCT GTGCAGGACC GCTACGGCAT CTCCGAGTTC 1800
AGGCAATGTC GACGCATGTT CCCTTGCTGT GATAGCCAAC GCGTTATGCA TAAGCTTATA ATTCAATCCT TTTTCGTCAC GCAGACAGTC GTCCCAATCC 1900
AATACGACGA CCTGTTTTAC CTCAGACGCT TGGATTGAGG AACGGCTCGC CAAACTAACT TGGTCGAGCT CTTTCACGAT TTCATCAGGT GAAGCAGGTT 2000
TCATTTTCAA GATAGGAATA AGCGAATCAT GCTCACCTTC GAGAACTTTC GCATCATCTA CGAAGTGACG CGCAGAATCC GTCCCTGCCA TCTCTTGCAT 2100
GGAACTTAGT TTTTGCATTT GCTCAAGCGT ATCTGGCGCG TCCGGGTCTA TCCCTACATT GTGAAGATGG GCTCTTTTGA ACAAGTTATT TTGAATTGAC 2200
TCGAATCTTA AGATTGCCGA ATCGCTGGCC GGATCTATTG CGTAGGCGAT TAAAATCATC GCTTCGCTGT TGGTTAACTT CTCACGCGGC ATTCCGATTG 2300
CGGCAAGGCG TTCAGTAACC TTTCCTTGAG GATCCCAAGC TGCTAGGGTT TCGTCTAAAA AAGCGCTGAC CTCGGAGGAC ATGGTAAGTT GCGGTGAAAA 2400
TGGATGGGCG CTCAGCGTTG CAAGAGCAAG CACGTCCACA CCTGCCTCCT TGGCTGCTGC TTCCATTGCC AGCATAGATC CTCCTGCCTG AATGTGGTCA 2500
TCGGTAATGA CAACTTTATC GCCACGTTTC AGGTCGGATG TAACGAAATA AGGCTGCTGT ACCAAACGGC CAATCGGACT CGCTTCTGTA CGCGAGGTTC 2600
TTGAAAGACC CACGAGGGAC TTATGATCTG TAAATACAAT AGGCTTTCTG TCCTCCTTCT TAGCTGAAAT AGCTTCTAAG GAGTTCAGTG AACTGGCCAG 2700
CTCTGTTTGT TCGCAGAAGG TAAAGAAGTT CAATGTACTA TCTTCGGCAT AGTGATCACG CGTCGGCCTT AGCAAATGAA CCACACCACC TTCATCGCCT 2800
AAAGCCTCAA CTACATGGCG ATGCAGACGT GCGACGTATT CTCCACGAGA TTTATCGATT GTCGCTGTAG CCGCGAAAGC TCGAATAGCA CGTGTTCCCT 2900
GACTCTGAGT ACTTAACAGC GGGCTGGTTT TTAGTCTGCC GAGTTTGCTA TTTTCGCCCT CGATTGGTTC ATCGGTGAAT AAATCTCGAC CACGCTTTCC 3000
CACATGTCTA ACTGCATAAT AGTCCTGCTT TCCCTGCGAG AGGCTTTTCA CTGATTGTAA AGATGGCTTC TCAGTAGCAA ATTCGCTAAA AAAGAGAGGC 3100
GCTTTCCCCG ATTCATTCCG TGAATGGTAG TTTTGCGAAT CTACACGTTC TGCAGAACCT AGGCTTTGGG TAGAGAGAAG AAACTGACCT TTTCCAACGT 3200
CGTTCGAGCG ATTCTCGGCA ATCATCTTAT TGACCGCCTG AAGATCACTG CTAGAAGTTG GCATTTTAGA TGGCTTACGA TCAAGAGGGC GGAGCCCCTT 3300
TAGTTGGGCG CTTAATGCCG CATCCTTTGG AATTTCGCTA TTGCGTCCCA CTGGAATTGG AGTTTTTGGC TGCAAATCCC CCTGGGGAAA TTGGCCAGTA 3400
TAATGAGACT TGCTTGCACT ACTTGTTTTC ATCAAGATTC ACTCCTATTG ATTAAACTAC CCCCTGATTT GCTTGGCTGT ATAATTCAAA AAATTTTCTT 3500
GACTTTATTT AAATGGCCCA TAAGCACTCA ACAACGCCTC AAATAAATTA TTATTTTCCT GGCACCCTTG CATGCTTCCG CTAATAAAAA AGGTCCTTGT 3600
ATGAAGAACG TAGACGGACT GAAATATTTT AGCTTTGCGG TATCAGTAGA CGCACACTTA AGAGAAAAAA CCCGTCTGAG AGCGAATATT TGATTCTGCA 3700
GGACGGTGAC GCGTTTAACA AAAAAGGGTT CCTGATTAGC CCTGACCTTC AGCCGCCAGT CGCAGATCTG CGCCGCGCTG GGTGGATGCT GCTGTCACTC 3800
TGAAGCCAAC GAGGTGACGT GATGAGCATC AATGCGGTGC AGTTCCAGGC TGGATTGTCG ATGCCTGAGT TCTTCGCGTT CTACGGCACC GAGGCCAAGT 3900
GCTATCGCGC GCTCTACACG TGGCGTTGGC CGCAGGGCTT TCGTTGCCCT GTTTGTGCCG GGCGCGTGCG CTCGCGTTTC AAGCGGCGTG CTGCGATCTA 4000
CTACCAATGC AGCGCGTGCC GGCATCAGAC CAGTCTGATG GCAGGCACGA TGTTCGAAGG CACCAAACTG CCGCTGCGCA CCTGGATGCT GGCCTTGCAC 4100
CTGTTGACCT CGACCAAAAC CAACATGGCC GCACTGGAGC TGATGCGTCA TCTGGGGGTT AACTACAAGA CGGCCTGGCG GATGAAGCAC AAGATCATGC 4200
AGGTCATGGC CGAGCGTGAA GCCACGCGGA AATTGGCGGG TTTCGTGCAG ATCGACGATG CCTATCTCGG CGGCGAGCGT AACGGTGGCA AGGCCGGACG 4300
CGGATCAGAG AACAAACAAG CGTTCCTGAT TGCGGTGCAG ACCGATGCCA CCTTCACCGC GCCGCGCTTT GTGGTGATTG AGCCGGTGCG CAGCTTCGAC 4400
AACACCTCGC TGCAGGACTG GATTGCCCGT CGCCTGGCGC CCGAATGCGA GGTCTACACC GATGGGCTGG CCTGCTTCCG CCGGCTGGAA GACGCCGGCC 4500
ACGCGCACAC CACGCTGGAC ACTGGCGGTG GTCGTGCCGC GACCGAAACG GCCGGTGCAC GTTGGCTCAA CGTGGTGCTG GGCAATCTCA AACGCGCCAT 4600
CAGCGGCGTG TATCACGCTA TCGCGCAAGG CAAATACGCA AGGCGCTACC TGGGAGAAGC GGCCTATCGT TTTAATCGTC GATTCCGCTT GCGCGAGATG 4700
CTGCCGCGAC TTGCCACGGC CATGATGCAA TCCAACCCAT GTCCAGAGCC GGTCCTGCGT GCAGCGAGCA ATTTTCATGG CTGAGAGTCA GGGCTAATCA 4800
GGTAAAATTT TTCATATAAG ATCACCATGT GTTAGGTGGA TATACTGTAG GAGCAAGTTT AGAGGGGAAC TTTCCGATTC GCTCCGCCTC ACCGAAATCC 4900
TGGCTGGGAC GACGAAGGCA CTGACGTGGA GGATTCCCGA GCCTTCGCCA AGCGGCTGAT CATCTGCCTG CCGGCATTGC ACCGGCTGAG ATGGCGTTTT 5000
CGGGTTCGCC AACGGAGTGC ACTGGCCGCA GCCGCGCCAG GAGTTGTTCC AACGTGCTCA GGCGCACCGT GGCCCGCAAG GTGTCCGCCT CGGCGTGTTC 5100
CCGGCGCTGG CGCTCTTCGA CCAGTTCGGT CCGCGCCGCA GCCAGTTCGG CGCGCACGCC TTCCAGCGCA TGGACATCTT GGGTCCAGCG CACCTGCAGG 5200
GCTTGGTGCT CGGCGGCCGT CAGGCGCAGC GCGTCGCGCT CGCGTTGCTG GGCGTCGGCC CGCTGGCGTG CCTGCGCCAG TTCCCGCTCC AGCCGGGTCT 5300
GGCGTTCCAG CCACTGGCCG TTTTCCCGGT TGAGCTGTAT CAGGTCGTGA TTCTTGGCGG TCAGCGCCTC GTTGGCCTGC CGTAGGGCGA CCTGCAACTC 5400
CTGCACCTGG TGCGCGTGCC GGCGCTGTTC CTGCTCACGC TGGTCCTTGA CCGAGGTGCG GTAGTGCTCC AGGGCTTCCC TGGCGTGTTC GTGCTTGTGT 5500
TCCAAGGATT TCGCATGGGC GTCGTGCTCG GCCAATCGCG CCGTGAGGCC CGCGATCCGC TCCTCCAGCT GAGCTAGCTC GGTAGCGCAG CTGGCCACCT 5600
CGCTCCTGGC AGCGTCGCCC GCCTCGCGTT CGGCCTGCAG CGCGGTCTCG CAGCGTTGCA GCTGCGTCCT GAGCGAGCCG GCCTCCTGCC GGGCCTGCTC 5700
CAGCGCTTGG GTGCGTTCCT GCAGCTGCGC CTGGAAGCGC GCCTGGGCCT GCGCCACGAC CGTGTCGGCC TCGCTGTGCA ACCGCTCGGC GAGGCGGGCG 5800
ATGAGGTCTT GAAGTGCGTC GCTCACGGCC ATCTTCGCGC CAACGCCTTG CCCTTCCTCC TCTTCCAATT CCCTCAAATA GCGGTGGATG GTGGTCTTGG 5900
ACCCCGTATT GCCGAGCGCC ACCCGGACCG CGTCCACGGA CGGATGCGTG CCCGTGGCGC GCAGGCGATC GCGGGCGCGT TGCACATCGC TTTTGTACAA 6000
CCCGGACCTT GCCATCCGGC ACTCCACGTA TTTCGTAACG TATTACATAC CATGTAATTA CATACTCCTC AACGCATTAC ACGGGACCGT CGATAGGCGT 6100
TGAGCTCACG CGGGATAATG CTGAATTATC CCGCCTTATG CGGAATTTTC GGCTACAGTC GCCCTGCGGC CGTACGAAAC GGCGGTTCGG AGCGACGCGG 6200
TGAGCTCGGT CAAGCAGTAT CTGGAAGCGG CAACTCGCGC CAACACCGAG CGCGCGTATG CAGGGGCGAT CCGTCACTTC GAGGTCGAAT GGGGTGGTCA 6300
TCTGCCGGCG ACTGCGGAGC AGGTGGCGCG CTACTTGGCC GCCTACGCCG GGCAACTCGC GCTCAACACA CTCAGGCACC GGCTCGCAGC ACTGGCGCAG 6400
TGGCACCAGG TGCACGGCTT TGTCGACCCG ACCCGGGCGC CGGTGGTGCG CCAAGTGCTC AAAGGCATCC AAACCCTGCA CCCGAGCGTC GAAAAACGCG 6500
CCACGCCCCT GCAACTCACC CTGCTGGCCC AGGTCACGAC ATGGCTGGAA GACGCTGCGG CTGCGGCCCA GTCTCGCGGC GATCGCGCCG CAGAACTGCG 6600
GCACCTGCGT GATCGCGCCT TGCTCCTGCT CGGCTTCTGG CGCGGCTTCC GCGGCGATGA ACTCACCCGC CTCCAGGTAA ACCACCTGCG CCTGGTGCCG 6700
GGCGAAGGCA TGACCTGCTT CCTGCCGCAC AGCAAGAGCG ATCGCCAGCA CGCCGGCGCC ACCTACAAGG TCCCGGCGCT GTCGCGCTGG TGCCCGGTGG 6800
CTGCCACCAT GACCTGGGTT GCGGCAGCCG CCCTCCACGA GGGGCCACTG TTTCGCGCAG TCAACCAGTG GGGCGGGATT GCCGCCGCGC CACTCCACCC 6900
CAACAGCCTG GTGCCGCTGC TACGGCGGAT CTTCCGCGAG GCGGGGCTGA GTTCTCCCAA CGACTACAGC GGCCACTCGC TGCGGCGCGG CTTTGCCGGC 7000
TGGGCCAACG CCAACGGCTG GGACGTCAAG GCGCTGATGG AGTACGTCGG CTGGCGCGAC GTGCACTCGG CGATGCGTTA CCTCGACGGG GCCGATCCGT 7100
TCGCCCGCCA GCGCATTGAG GCGAGCCTGT CGCCAGCCAC ACCACCGCTG CTGGCCCTGG CGGCGCCGGC TCCCGATCCA GTGCCGACCA CGGCGGTCGA 7200
AGCGACTGTC ACCCTGACGC GCTTCAACTC GCGTGTGCGC GGACTGGCCA AAGCGCATCG GCTGATCGAG CAAATCTGCC TGCAACCGCA TCAGGCGCAG 7300
CGACTCAACG CCGACGGCAC GCGCTACCGG TTGGCGATCG CCGCCGTTGA CGAGGCGGCC TTTGAAGAAA CCATCGCAAT GCTGCTCGAC GAGATGCACC 7400
GCATCGCCGA CAACCACCAG TGCTTCCTCG CCGTCGCCTT GCGCGATGAA GCGGGCGGGC GCCATTGGGA CTGAGCTGAG CATGACGACG CTGCACGAAA 7500
CCGCCTACCC GCGCCTCAAG CCCGATCCCA CCGCCAAAGA ACTCCAGGAT ATCTACACGC CTACTGCGGC GGAGCTGCAG TGCGTCCGGA ACATCGCTAC 7600
CGGCCCGGCC ACACGGCTGG CCCTGCTACT GCATCTGAAG CTGTTCCAGC GCCTGGGTTA TTTCACGACC CTGATCGAGG TGCCCGAACG TATCGTGCAG 7700
CATGTCGCTC AGACGCTGGG AATGCGCCGC GTGCCCGCCG ACCGGTTGGC GGGCTACGAC GCCTCTGGCG CCAAGCGCGG GCATCTGGCC CAACTGCGGG 7800
CGTTCCTCAA CGTCTGTCCG CTCGATGCGG CTGGGCGAGA CTGGCTCGGC ACCGTGGCTG AAACGGCTGC GCGGACCAAG CACATCGTGC CCGATATCGT 7900
GAACGTGATG CTTGAAGAGC TGGTGCATCA CCGCTTTGAG TTGCCGGCCT TCAGCACGCT AGAACGCATC GCGATCGCCG CCCGCGAACG TGTCCACGAT 8000
GCGCACTACC GCCAGATCGC CGATGCGTTG TCACCGACCA TGCGGACGCT GATCGATAAC CTGCTGCTGA CACCACCAGG CAGCCACCAC AGTGATTGGC 8100
ACACGCTCAA GCGCGAGCCC AAACGCCCAA CCAACAAGGA AGTGCGCCAT TACCTGCGGC ACATCCAGCG CCTGCGCATC CTGGCCGAGC AGCTGCCGCC 8200
GATCGATGTT TCGGTGCCTA AGCTCAAGCA ATTCCGGGCG ATGGCCCGCG CACTTGATGC CGCCGAGTTG GCCGAACTGG TCCCGATCAA GCGCTATGCG 8300
CTGGCCGCGA TCTTCATCCG CTCCCAGTAT CGCAAGACGC TCGACGATGC GGCCGACCTG TTCATCCGCC TGATCCAGAA CCTGGAGAAC ACTGCGCAGC 8400
AAAAGCTGAT CGCTTATCAG CTCGAACACA GCAAACGGGC CGATGCCCTG ATCGGCCAGC TCCGGGAGAT CCTGCAGGCC TATCAGGTCG AGGGCACAGA 8500
CACCGAGCGT GTGGGCGCGA TCGCGGGCGT GCTGGTCGCC GACATCGCTC TGCTGACGGC TGAGTGCGAC GAGCACATGG CCTACGCCGG CCGCAACTAT 8600
CTGCCATTCC TGCTGGCACC ATACGGGACG TTGCGTCCGC TGCTGTTCAA CTGCCTGGAA ATCATGGGCC TGCGTGCCGC CAGCCAGGAC CCCAGCATGG 8700
AGCGCATGAT CGGCGCTGTC CTGGCGCTGC GCAGTCAGCG CCGCGAGACG ATCGACGCCG CTAGCCTGGG CGTGGCTACA ACCGACCTGA CGTGGTTATC 8800
GTCAGCCTGG CGCAAGCATG TGATGCCCAA AGCCTTGGCC GCCGCCAGCC CCGGCTGGAT CCATCGCAAG TACTTCGAAC TGGCGGTGCT CGCGCAGATC 8900
AAGGACGAAC TCAAATCCGG CGACCTGTAC ATCCCGCACG GCGAGCGTTA CGACGACTAC CGCGAGCAAC TAGTCGACGA GGCGACACTC GCGCAGGAAC 9000
TGGACGCCTA CGGCGAGGTC TCGGGCGTCG CCACCGACGC GGCTGACTTC GTGCAGGGTC TGCGCACCGA ACTGACGACA TTGGCCGATG CCGTGGACGC 9100
TCGGTTCTCG GACAACCTGC ACGCCAGCAT GCTCGACGGG CGGCTGGTGC TCAAGCGCCT GCAGGGCGCA CAGGTGACCC AGGCCATCGC CACAGTGGAC 9200
AGCGCGATCA CCGACCGGCT GCCGCCGACC AGCATCGTCG ATGTCCTGGT CGACACCACC CGCTGGCTGG ACCTGCACGT GCACTTCCGC CCGATCGCCG 9300
GCACCGACGC GCGAGTCGAC GATCTGCTGC GGCGCGTGAT CACCACCTTG TTCTGCTACG GCTGCAATCT GGGGCCGACC CAGACCGCGC GTTCGGTCAA 9400
GGGCTTCAGC CGGCGCCAGA TCTCGTGGTT GAACTTGAAG TACGTCACCG ATGAAACGCT CGACAAGGCG ATCGTCCAGG TGATCAACAT GTACAACAAG 9500
TTCGAGTTAC CCGGCTACTG GGGCAGTGGC AAGAGCGCCT CGGCCGACGG CACGAAGTGG AACGTGTACC AGCAGAACCT ACTGTCGGAA TACCACATTC 9600
GCTACGGCGG CTATGGTGGC ATCGGTTACT ACCATGTGTC CGACAAGTAC ATCGCGTTGT TCAGCCACTT CATCCCGTGT GGCATACACG AAGCGGTCTA 9700
CATCCTCGAC GGGATGCTGG CCAACCGGTC CGACATCCAG CCCGACACCG TACACGGCGA CACCCAGGCG CAGAGCTTCC CGGTATTCGG GCTGGCGCAT 9800
CTGCTGGGCA TCAACCTCAT GCCGCGCATC CGCAACATCA AGGACCTGGT GTTTTCCCGG CCGGAGCCAG GTCGGACCTA CGAGAATATC CAGGCGCTGT 9900
TTGGGGACAG CATCGACTGG ACACTCATCG AGACCCACGT GCACGACATG CTGCGGGTCG CCATCTCGAT CAAACTGGGC AAGATCACCG CTTCCACCAT 10000
CCTGCGCCGG CTCGGCACCT ACAGCCGCAA GAACAAGCTG TACTGGGCAT TTCGCGAACT GGGCAAGGCG GTACGCACAC TGTTCCTGTT GCGCTACATC 10100
GACGATGTCG AAGTGCGCAA GACTATCCAC GCGGCGACCA ACAAGAGCGA GGAATTCAAC GGCTTCGTCA AATGGGCCTT CTTCGGCGGG GAAGGGATCA 10200
TCGCCGAAAA CATCCAGCAC GAGCAGCGCA AGATCGTGCG CTACAACCAA CTCGTGGCAA ATCTGATCAT TCTTCATAAC GTAGAGCAGA TGACCCGCGT 10300
TCTGGCCGAA CTGCGGGACG AAGGCCGAAC AATTAGCCCG GAGATTCTGG CAGGCCTGTC GCCATACAGG ACATCGCACA TCAACCGGTT CGGTGACTAC 10400
ACCTTGGACC TCAAGCGGCA GGTCGAGCCA ATCGATTTCT CGCGGAGAAT TCTTGCGGCG ACAACGCGTT AGGACGCAAT CAGCTGTTTT TTTACCGGGC 10500
GAATTCCTGC TTGCCCATCG CGGTCAAAAA CGCATAACTG CAATAATTAC ATCCTGGGAA CAGGAGGACT AGAGTGGCCG CTCAACCACC ACCTCGGGTA 10600
TCTCATGATC ATGCCTTCGC GCCTTTTGCG TTTAACGCTC GGTGTCAGCG TCTGTGTGGC CTCAACCAGC GTAGCAGCGC AAGCCATCGC TCCCGAAACA 10700
ACCGCATCCT CCGCAACCGA CGCCGGTGGG CAACAGCAGG ATCCCGCACC CACTGCGAGC TTCGAACAGT GGCTGGCAGA CTTCCGCCAA CGTGCGCTTG 10800
CCGCCGGCAT TGGAGCCACC ACGCTGGATA ACGCATTGGC TGGTGTCACA CCCGATCCAT CGGTGCATGA ACTGGATCAG CGGCAACCCG AATTTACCCA 10900
GTATCTGTGG GACTATCTCA GCGCGCGTGT CACACCTTCG GCCATTCAGG AAGGACAGCA GCTGCTGATC AGACAGCACG CCCTCTTCGA GAAGTTGCGG 11000
CAGCACTACG GTGTGGATCC GGGCATTCTG ACCGCCATCT GGAGCATGGA AAGCGGGTAC GGCAAGCAGA TCGGGGACTT TTATGTAATT CGCTCCCTGG 11100
CGACACTGGC CCATGAGGGA CGGCGCACCA CGTATGGCAA CACGCAGCTG CTTGCGGCCC TGCAGATCCT GCAGACGGAA AAAAGCATTG ATCGCTCGCA 11200
ACTGGTGGGT TCGTGGGCCG GCGCCATGGG ACAGACGCAA TTCATTCCGA GCACCTATCG CGACTACGCC GTCGACGAGG ATGGCGACCA GAAGCGGGAT 11300
GTCTGGAATT CCAAGGCGGA CGCTTTGGGC TCTGCGGCGA ATTATCTCAA GCAGAACAAT TGGACCAGCG CTGTTCCCTG GGGCCAGGAA GTCCAGCTGT 11400
CAGCCGGCTT CGACTACGCG CAAGCCGACC TGACGATCAA GAAGACCGTC GCCGAATGGC AGCGCCTGGG CGTGGCGCCC CGCAGGCCGA TTGCGCCCGC 11500
ACTGGCGCAG CAGTTGGCAT CGGTGTTGTT GCCCACCGGA TACCGCGGCC CGGCCTTCCT AGTGTTCGAT AACTTCCGCA GCATTCTGCG CTACAACAAT 11600
TCCACCGCCT ATGCCCTGGC GGTCGGCTTG CTGGCAGACG GCTATGCGGG CAGGGCCGGG GTCAAGCAAC CCTGGCCCAA AGACGATCCG CCGCTCAATA 11700
GCACGGCCCA GATCACCGAG CTGCAGCAGA GGCTGACCGA CAAGGGATTC GACGTGGGCG GCATCGACGG TGTGCTGGGG GCGCAAACTC GCCAGGGAAT 11800
CCGTGCATTC CAGCGTAGCC AGCAATTGCC GCAGGACGGT TACGCCAGTA CGTCGCTGCT GGCCCGTCTG CGGGCCGCCT GATCGGGGAT ATCCCTCACC 11900
TTGGCCATGC TTCAAAATAT TTAAATGTTA ACCAACAACG AGGCATTAAG CATGCTAAGA AAATCAATAA TTTTAGCTAA AATATCGTCA TTTCTCGCTG 12000
CAATAGCATT CGGATTCCTT TTTTTATCGA TATCGGCCCC AAGCCAGGCA GACGATTTGG GGGCAGTTTC TGGCATGGTG ACATTCAACC CGCCAATCCT 12100
ACAGATAATC AGGTGCGGAG CGCGCACCAG CAGCAAGCTT TGGGTAAATG CAAACAACAG TTTGTAAATT CCAGCTCTGC ATATTTAGCG AGTTGGGCCG 12200
TTACTGCAGG GGGGAAGCAT CCTGATTACT GGAATATCAA TAGCGTCTGG ATTTGCACAA GTGGCTAAGA TGAATTGCCC ATCTTGATGG TCGATAGGGG 12300
TTGAGGGCCG GCAGGAAGTT GTGAAAAACT TCTTTTCTAA CAGAGATTTA GCTCAATTTT GGCTGTTTTT TACACAAATC CCTGTCGACC CTCGAGTACG 12400
CGTAGTTCAC CGC
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|
| Recombination Sites |
|
|
| Name |
Coordinates |
Gene |
Sequence |
| res_acc_IR2 |
6048-6056 |
9 |
TACCATGTA |
| res_acc_IR2 |
6106-6119 |
14 |
TCACGCGGGA TAAT |
| res_acc_IR1 |
6125-6138 |
14 |
ATTATCCCGC CTTA |
|
| ORFs |
|
|
| Gene Name |
Associated TE |
Coordinates |
Class |
Sub Class |
Orientation |
| tnp_p |
ISXca5 |
369-804 |
Transposase |
|
+ |
| xopC |
TnXax1.3 |
928-3432 |
Passenger Gene |
Plant Pathogenicity |
- |
| tnp |
IS1595 |
3822-4784 |
Transposase |
|
+ |
| tnpT |
TnXax1.3 |
4960-6015 |
Accessory Gene |
Resolvase |
- |
| tnpS |
TnXax1.3 |
6200-7474 |
Accessory Gene |
Resolvase |
+ |
| tnpA |
TnXax1.3 |
7446-10472 |
Transposase |
|
+ |
| mltB |
TnXax1.3 |
10605-11882 |
Passenger Gene |
Plant Pathogenicity |
+ |
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| tnp_p |
Tnp_p |
ISXca5 |
436 |
369-804 |
+ |
| Class: | Transposase |
| Transpoase Chemistry: | DDE |
Protein Sequence:
|
MRTRRPAAEQ LPADELFRSR LENQIDLRHP LVQLIHRLPW SALEQALSPR LPATPGTGGR PALPVRLIAG LLYLKHAYGL SDEAVCERWL ENPYWQFFTG
EVVFQTCLPC DPSSLTRWRQ RLGEAGMEEL LAHTINTAHV MKAVD
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| xopC |
XopC |
TnXax1.3 |
2505 |
928-3432 |
- |
| Class: | Passenger Gene |
| Sub Class: | Plant Pathogenicity |
Protein Sequence:
|
MKTSSASKSH YTGQFPQGDL QPKTPIPVGR NSEIPKDAAL SAQLKGLRPL DRKPSKMPTS SSDLQAVNKM IAENRSNDVG KGQFLLSTQS LGSAERVDSQ
NYHSRNESGK APLFFSEFAT EKPSLQSVKS LSQGKQDYYA VRHVGKRGRD LFTDEPIEGE NSKLGRLKTS PLLSTQSQGT RAIRAFAATA TIDKSRGEYV
ARLHRHVVEA LGDEGGVVHL LRPTRDHYAE DSTLNFFTFC EQTELASSLN SLEAISAKKE DRKPIVFTDH KSLVGLSRTS RTEASPIGRL VQQPYFVTSD
LKRGDKVVIT DDHIQAGGSM LAMEAAAKEA GVDVLALATL SAHPFSPQLT MSSEVSAFLD ETLAAWDPQG KVTERLAAIG MPREKLTNSE AMILIAYAID
PASDSAILRF ESIQNNLFKR AHLHNVGIDP DAPDTLEQMQ KLSSMQEMAG TDSARHFVDD AKVLEGEHDS LIPILKMKPA SPDEIVKELD QVSLASRSSI
QASEVKQVVV LDWDDCLRDE KGLNYKLMHN ALAITAREHA STLPELGDAV AVLHSKLNGA EPVDEEAPLL MKNQKDFSSY LMGRQSIYKR HIIEDFVRKM
LPGISEHKAA SINNAVYSNF VREYKMLVKP EVSKKNYSRD VPFPDIELSL LPGAKEILEK SRNANSRVIL ISNRGHGDLE NEINHLGMMH YFDVVSGAEE
VTLEKSHLPP SQMPEDLQKR LINSLNGSDE EALRATLSEA AIYAHPDSTT IERIDKKPDS TRLAESLERL SVQPNVPITS YGDQPSDIKQ LKSVAEPKSR
VLKGVIVNAQ RDDVGREIDV DGVPTRVVSK ITEL
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| tnp |
Tnp |
IS1595 |
963 |
3822-4784 |
+ |
| Class: | Transposase |
| Transpoase Chemistry: | DDE |
Protein Sequence:
|
MSINAVQFQA GLSMPEFFAF YGTEAKCYRA LYTWRWPQGF RCPVCAGRVR SRFKRRAAIY YQCSACRHQT SLMAGTMFEG TKLPLRTWML ALHLLTSTKT
NMAALELMRH LGVNYKTAWR MKHKIMQVMA EREATRKLAG FVQIDDAYLG GERNGGKAGR GSENKQAFLI AVQTDATFTA PRFVVIEPVR SFDNTSLQDW
IARRLAPECE VYTDGLACFR RLEDAGHAHT TLDTGGGRAA TETAGARWLN VVLGNLKRAI SGVYHAIAQG KYARRYLGEA AYRFNRRFRL REMLPRLATA
MMQSNPCPEP VLRAASNFHG
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| tnpT |
TnpT |
TnXax1.3 |
1056 |
4960-6015 |
- |
| Class: | Accessory Gene |
| Sub Class: | Resolvase |
Protein Sequence:
|
MARSGLYKSD VQRARDRLRA TGTHPSVDAV RVALGNTGSK TTIHRYLREL EEEEGQGVGA KMAVSDALQD LIARLAERLH SEADTVVAQA QARFQAQLQE
RTQALEQARQ EAGSLRTQLQ RCETALQAER EAGDAARSEV ASCATELAQL EERIAGLTAR LAEHDAHAKS LEHKHEHARE ALEHYRTSVK DQREQEQRRH
AHQVQELQVA LRQANEALTA KNHDLIQLNR ENGQWLERQT RLERELAQAR QRADAQQRER DALRLTAAEH QALQVRWTQD VHALEGVRAE LAAARTELVE
ERQRREHAEA DTLRATVRLS TLEQLLARLR PVHSVGEPEN AISAGAMPAG R
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| tnpS |
TnpS |
TnXax1.3 |
1275 |
6200-7474 |
+ |
| Class: | Accessory Gene |
| Sub Class: | Resolvase |
| Transpoase Chemistry: | Tyrosine |
| Sequence Family: | Tyrosine Site-Specific Recombinase |
Protein Sequence:
|
VSSVKQYLEA ATRANTERAY AGAIRHFEVE WGGHLPATAE QVARYLAAYA GQLALNTLRH RLAALAQWHQ VHGFVDPTRA PVVRQVLKGI QTLHPSVEKR
ATPLQLTLLA QVTTWLEDAA AAAQSRGDRA AELRHLRDRA LLLLGFWRGF RGDELTRLQV NHLRLVPGEG MTCFLPHSKS DRQHAGATYK VPALSRWCPV
AATMTWVAAA ALHEGPLFRA VNQWGGIAAA PLHPNSLVPL LRRIFREAGL SSPNDYSGHS LRRGFAGWAN ANGWDVKALM EYVGWRDVHS AMRYLDGADP
FARQRIEASL SPATPPLLAL AAPAPDPVPT TAVEATVTLT RFNSRVRGLA KAHRLIEQIC LQPHQAQRLN ADGTRYRLAI AAVDEAAFEE TIAMLLDEMH
RIADNHQCFL AVALRDEAGG RHWD
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| tnpA |
TnpA |
TnXax1.3 |
3027 |
7446-10472 |
+ |
| Class: | Transposase |
| Transpoase Chemistry: | DDE |
Protein Sequence:
|
MKRAGAIGTE LSMTTLHETA YPRLKPDPTA KELQDIYTPT AAELQCVRNI ATGPATRLAL LLHLKLFQRL GYFTTLIEVP ERIVQHVAQT LGMRRVPADR
LAGYDASGAK RGHLAQLRAF LNVCPLDAAG RDWLGTVAET AARTKHIVPD IVNVMLEELV HHRFELPAFS TLERIAIAAR ERVHDAHYRQ IADALSPTMR
TLIDNLLLTP PGSHHSDWHT LKREPKRPTN KEVRHYLRHI QRLRILAEQL PPIDVSVPKL KQFRAMARAL DAAELAELVP IKRYALAAIF IRSQYRKTLD
DAADLFIRLI QNLENTAQQK LIAYQLEHSK RADALIGQLR EILQAYQVEG TDTERVGAIA GVLVADIALL TAECDEHMAY AGRNYLPFLL APYGTLRPLL
FNCLEIMGLR AASQDPSMER MIGAVLALRS QRRETIDAAS LGVATTDLTW LSSAWRKHVM PKALAAASPG WIHRKYFELA VLAQIKDELK SGDLYIPHGE
RYDDYREQLV DEATLAQELD AYGEVSGVAT DAADFVQGLR TELTTLADAV DARFSDNLHA SMLDGRLVLK RLQGAQVTQA IATVDSAITD RLPPTSIVDV
LVDTTRWLDL HVHFRPIAGT DARVDDLLRR VITTLFCYGC NLGPTQTARS VKGFSRRQIS WLNLKYVTDE TLDKAIVQVI NMYNKFELPG YWGSGKSASA
DGTKWNVYQQ NLLSEYHIRY GGYGGIGYYH VSDKYIALFS HFIPCGIHEA VYILDGMLAN RSDIQPDTVH GDTQAQSFPV FGLAHLLGIN LMPRIRNIKD
LVFSRPEPGR TYENIQALFG DSIDWTLIET HVHDMLRVAI SIKLGKITAS TILRRLGTYS RKNKLYWAFR ELGKAVRTLF LLRYIDDVEV RKTIHAATNK
SEEFNGFVKW AFFGGEGIIA ENIQHEQRKI VRYNQLVANL IILHNVEQMT RVLAELRDEG RTISPEILAG LSPYRTSHIN RFGDYTLDLK RQVEPIDFSR
RILAATTR
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| mltB |
MltB |
TnXax1.3 |
1278 |
10605-11882 |
+ |
| Class: | Passenger Gene |
| Sub Class: | Plant Pathogenicity |
| Target: | cell wall |
| Comment: | Membrane-bound lytic murein transglycosylase B precursor |
Protein Sequence:
|
MIMPSRLLRL TLGVSVCVAS TSVAAQAIAP ETTASSATDA GGQQQDPAPT ASFEQWLADF RQRALAAGIG ATTLDNALAG VTPDPSVHEL DQRQPEFTQY
LWDYLSARVT PSAIQEGQQL LIRQHALFEK LRQHYGVDPG ILTAIWSMES GYGKQIGDFY VIRSLATLAH EGRRTTYGNT QLLAALQILQ TEKSIDRSQL
VGSWAGAMGQ TQFIPSTYRD YAVDEDGDQK RDVWNSKADA LGSAANYLKQ NNWTSAVPWG QEVQLSAGFD YAQADLTIKK TVAEWQRLGV APRRPIAPAL
AQQLASVLLP TGYRGPAFLV FDNFRSILRY NNSTAYALAV GLLADGYAGR AGVKQPWPKD DPPLNSTAQI TELQQRLTDK GFDVGGIDGV LGAQTRQGIR
AFQRSQQLPQ DGYASTSLLA RLRAA
|
|
| Internal Transposable Elements (TE) |
|
|
| TnCentral Accession |
TE Name |
Type |
Coordinates |
Length |
| ISXca5_p-CP002914 |
ISXca5 |
Insertion Sequence |
253-804 |
552 |
| IS1595-AF249895 |
IS1595 |
Insertion Sequence |
3731-4802 |
1072 |
|
| Internal Repeat Elements |
|
|
| Name |
Associated Mobile Element |
Coordinates |
Sequence (Top Strand) |
| IRL |
ISXca5 |
253-271 |
GTCGCCCCTG AAAAACCCC |
| IRint |
TnXax1.3 |
895-933 |
GGGGCATCAC GATTGTTTCG AGCCTCTGCC CAACTAAAG |
| IRL |
IS1595 |
3731-3754 |
CCTGATTAGC CCTGACCTTC AGCC |
| IRR |
IS1595 |
4779-4802 |
CCGACTCTCA GTCCCGATTA GTCC |
|
| References |
|
|
