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Internal Transposable Elements | |
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Internal Repeats | |
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References | |
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| Name: Tn6203 |
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| Family: Tn3 Group: Tn21 |
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| Evidence of Transposition: no |
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| Host |
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| Host Organism: | Pseudomonas aeruginosa P33 | Molecular Source: | chromosome |
| Place of Origin: | Hangzhou, China | Date of Isolation: | 2020 |
| | Other Geographic Information: | clinical isolate Sir Run Run Shaw Hospita |
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| Map |
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| Terminal Inverted Repeats (IR) |
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| IRR (Length: 38 bp) |  | GGGGTCGTCTCAGAAAACGGAAAATAAAGCACGCTAAG |
| IRR (Length: 41 bp) | | GGGGTCGCCTCAGAAAACGGAAAATAAAGCACGCTAAGCCG |
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| Sequence |
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--------10 --------20 --------30 --------40 --------50 --------60 --------70 --------80 --------90 -------100
GGGGTCGTCT CAGAAAACGG AAAATAAAGC ACGCTAAGGC GTAACTACCC TCGGCTACAC CGCGTCGGCA CCACGCGGCT CTTTCTCCCC TTGCAGCGAA 100
GCAATCAGCG GGCAAGAAAC GTTCCCTTGC CGCGCATGGC AGGCGAACAC AAGTTCGGAT AGCACGGTTT CCATGCGCGC CAGGTCGGTC ATTTTTTCGC 200
GCACGTCCTG AAGCTTGTGC TCGGCCAGGC TGCTGGCTTC CTCGCAGTGG GTGCCGTCAT CCAGCCTCAG CAGCTCTGCG ATCTCGTCGA GGCTGAATCC 300
GAGCCGCTGG GCTGATTTCA CGAAGCGCAC CCGCGTCACA TCCGCCTCGC CATAGCGGCG GATGCTGCCA TAGGGCTTGT CCGGCTCCGG CAACAAGCCC 400
TTGCGCTGAT AGAACCGGAT TGTTTCCACG TTGACCCCGG CCGCCTTGGC GAAAACGCCA ATAGTCAGAT TCTCCAAATT TTTTTCCATA TCGCTTGACT 500
CCGTACATTG GTACGGAAGT AAGCTTAAGC TATCCAATCC AGATTTGAAA GGACAAGCGT ATGTCTGAAC CTCAAAACGG GCGCGGGGCG CTCTTCACTG 600
GCGGGCTAGC CGCCATCCTC GCCTCGGCTT GCTGCCTGGG GCCGCTGGTT CTGATCGCCC TGGGGTTCAG CGGCGCTTGG ATCGGCAACT TGACGGTGTT 700
GGAACCTTAT CGCCCGATCT TCATCGGCGC GGCGTTGGTG GCGCTGTTTT TCGCCTGGCG GCGCATCTAC CGACCGGCGC AAGCCTGCAA ACCAGGGGAT 800
GTGTGTGCGA TTCCCCAAGT GCGCGCTACT TACAAGCTCA TTTTCTGGGT CGTGGCCGCG CTGGTTCTGG TCGCGCTCGG ATTTCCCTAC GTCATGCCAT 900
TTTTCTATTA ATCACAGGAG TTCATCATGA AAAAACTGTT TGCCTCTCTC GCCATCGCTG CCGTTGTTGC CCCCGTGTGG GCCGCCACCC AGACCGTCAC 1000
GCTGTCCGTA CCGGGCATGA CCTGCTCCGC TTGTCCGATC ACCGTCAAGA AGGCGATTTC CAAGGTCGAA GGCGTCAGCA AAGTTAACGT GACCTTCGAG 1100
ACACGCGAAG CGGTTGTCAC CTTCGATGAT GCCAAGACCA GCGTGCAGAA GCTGACCAAG GCCACCGAAG ACGCAGGCTA TCCGTCCAGC GTCAAGAAGT 1200
GAGGCACTGA AAACGGCAGC GCAGCACATC TGACGCCCTT GTCTGCTACC ACAAACGAAA AAGGATCTGT CGCATGACCC ATCTAAAAAT CACCGGCATG 1300
ACCTGCGACT CGTGCGCGGC GCACGTCAAG GAAGCGCTGG AAAAAGTACC CGGCGTCCAA TCTGCCATAG TGTCCTATGC CAAGGGCGCG GCCCAGCTCG 1400
CCCTTGATCC AGGCACAGCG CCGGACGCAC TGACCGCCGC CGTGGCTGGC CTGGGCTACA AAGCGATGCT CGCCGATGCC CCGCCGACCG ACAACCGCAC 1500
TGGGCTGTTC GACAAGGTGC GCGGCTGGAT GGGTGCCGCC GACAAGGGCA GCGGCGGCGA GCGCCCGTTG CAAGTCGCCG TGATCGGCAG CGGTGGAGCC 1600
GCGATGGCGG CAGCACTGAA GGCCGTCGAG CAAGGCGCGC AGGTCACGCT GATTGAGCGC GGCACCATCG GCGGCACCTG CGTCAACGTC GGTTGTGTGC 1700
CGTCCAAGAT CATGATCCGC GCCGCCCACA TCGCCCATCT GCGCCGGGAA AGCCCATTCG ACGGCGGCAT GCCACCCACA CCGCCGACGA TCTTGCGCGA 1800
GCGGCTGCTG GCCCAGCAGC AGGCCCGTGT CGAAGAACTC CGTCATGCCA AGTACGAAGG CATCCTGGAC GGCAATTCAG CCATCACCGT TCTGCACGGT 1900
GAAGCGCGTT TCAAGGACGA CCAGAGCCTT ATCGTTAGTT TGAACGAGGG TGGTGAGCGC GTCGTGATGT TCGACCGCTG CCTGGTCGCC ACGGGTGCCA 2000
GTCCGGCCAT GCCGCCGATT CCGGGCCTGA AAGAGTCACC CTACTGGACT TCGACCGAGG CCTTGGTCAG CGACACCATT CCCGAACGCC TGGCCGTCAT 2100
CGGCTCGTCG GTGGTGGCGC TGGAACTGGC GCAAGCCTTC GCCCGGCTGG GTAGCCAGGT CACGATCCTT GCGCGCAGCA CGCTGTTCTT CCGCGAAGAC 2200
CCTGCCATCG GCGAGGCCGT CACAGCCGCC TTCCGTGCCG AAGGAATCAA GGTACTGGAA CATACGCAAG CCAGCCAAGT CGCCCATGTG GACGGCGAAT 2300
TCGTGCTGAC CACTGGACAG GGCGAAGTGC GCGCCGACAA GCTGCTGGTC GCCACCGGCC GGACACCGAA CACGCGCAGC CTGGCATTGG AAGCGGCGGG 2400
GGTAGCCGTC AATGCGCAGG GGGCCATCGT CATCGACAAG GGCATGCGCA CCAGTAGCCC GAACATCTAC GCGGCCGGCG ACTGCACCGA CCAGCCGCAG 2500
TTCGTCTATG TGGCGGCAGC GGCCGGCACT CGTGCGGCCA TTAACATGAC CGGCGGCGAC GCCGCCATCA ATCTGACCGC GATGCCGGCC GTGGTGTTCA 2600
CCGACCCGCA AGTGGCGACC GTGGGCTACA GCGAGGCGGA AGCGCACCAC GATGGCATCG AAACCGACAG CCGCACGCTG ACGCTCGACA ACGTGCCGCG 2700
TGCGCTCGCC AACTTCGATA CCCGCGGCTT CATCAAGCTG GTCATCGAGG AAGGCAGCGG ACGGCTGATT GGCGTACAGG TGGTGGCCCC GGAAGCGGGC 2800
GAACTGATCC AGACGGCTGT TCTCGCCATT CGCAACCGCA TGACGGTGCA GGAACTAGCC GACCAGTTGT TCCCCTACCT AACGATGGTC GAGGGCTTGA 2900
AGCTCGCGGC GCAGACCTTC AGCAAGGACG TGAAGCAACT GTCCTGCTGC GCCGGATAAG GAAAAGGAGG TGTTCGATGA ACGCCTACAC AGTGTCCCGA 3000
CTGGCCCTTG AGGCCGGGGT GAGCGTGCAT ATCGTGCGCG ACTACCTGCT GCGCGGATTG CTGCGGCCAG TCGCCTGCAC CACGGGCGGC TACGGCTTGT 3100
TCGATGACGC CGCCTTGCAG CGGCTGTGCT TTGTGCGGGC CGCTTTTGAG GCGGGCATCG GCCTGGACGC ATTGGCGCGG TTGTGCCGGG CGCTGGATGC 3200
GGCGGACTGC GATGAAACAG CCGCACAGCT TGCCGTGCTG AGTCAGTTCG TCGAACGCCG ACGCGAAGCG TTGGCCGATC TGGAAGTGCA GTTGGCCGCG 3300
ATGCCGACCG CGCCGGCCCA GCAAGCGGAG AGTCTGCCAT GAACAGCCCC GAGCGCTTGC CGACCGAGAC ACACAAGCCG TTCACCGGCT ACCTGTGGGG 3400
TGCGCTGGCG GTGCTCACCT GTCCCTGTCA TTTGCCGATT CTCGCCATTG TGCTGGCCGG CACGACGGCC GGCGCGTTCA TCGGCGAGCA CTGGGGTATT 3500
GCAGCCCTCA CGCTGAGCGG CTTGTTTGTC CTGTCTGTGA CGCGGCTGCT GCGGGCCTTC AGAGGTCGAT CATGAGCGCT TCCCAGCCAA TTGAATGGAC 3600
AGTGGCGCAA CTGGCGCAGG CGGTCGAGCG CGGGCAGCTT GAGCTGCACT ACCAGCCGAT TGTCGATTTG CGCAGTGAGC AGATTGTCGG CGCGGAAGCC 3700
CTGTTGCGCT GGCGTCATCC GACGCTCGGA CTGTTGCCGC CGGGCCAGTT CCTGCCCGTG ATCGAATCGT CCGGCCTGAT GCCGGAAATC GGCGCATGGG 3800
TGCTGGGCGC AGCCTGCCGT CAAATGCGCG ACTGGCGGGT GCTGGCATGG CAACCGTTCC GGCTGGCCGT CAATGTTGCG GCGAGCCAAG TGGGGCCAGA 3900
TTTCGACAAG TGGGTAAAGG GCGTGCTGGC CGATGCCGGG TTGCCCGCCG CGTATCTTGA AATTGAGCTG ACCGAATCGG TTGCGTTCGG TGATCCGGCG 4000
ATCTTCCCCG CCCTGGAAGC TTTGCGACAG ATCGGTGTGC GCTTCGCCGC CGACGACTTC GGCACCGGCT ATTCCTGCCT GCAACACCTG AAATGCTGCC 4100
CCATCAGCAC GCTCAAGATC GACCAATCGT TTGTCGCCGG ACTCGCCAAC GACCACCGCG ACCAGACCAT CGTGCGCACC GTGATTCAGC TTGCGCATGG 4200
GCTTGGCATG GAAGTAGTGG CCGAAGGCGT GGAAACATCG GCGAGTCTTG ATTTGTTGCG ACAAGCGGAC TGCGACACAG GACAAGGCTT CCTGTTCGCC 4300
AAGCCGATGC CGGCGGCGGC ATTCGCCGTC TTCGTCAGTC AATGGAGGGG TGCCACCATG AATGCAAATG ATCCGACTGC CACCAGTTGC TGCGTGTGCT 4400
GCAAGGAAAT CCCGCTCGAT GCCGCCTTCA CCCCGGAAGG CGCGGAATAC GTCGAGCACT TCTGCGGGCT GGAGTGCTAT CAGCGCTTCC AGGCGCGCGC 4500
CAAGACCGGG AGCGAAACCG ATGCCGATCC GAACGCCTGC GACTCATCAC TGTCAGACTG AGGCATACCC TATCCTGATG TCAGGAGAAG CCACCCAGCA 4600
ACGTCAGAAT AGAGTTAACT TTTGTGTTTC TTGACACCTG CGGCGAAAGG TCATAGATTT CTTCCTGACA CTTTCGTATT TGGAGGTATC TTGCAGGGTC 4700
AACGCATCGG CTACGTCCGG GTCAGCAGCT TCGACCAGAA CCCGGAGCGG CAACTGGAGC ATGTCGAAGT CGGCAGGGTG TTCACCGACA AGGCGTCGGG 4800
CAAGGACACC CAGCGGCCCG AGCTTGATTC GCTGCTGGCC TTCGTGCGCG AAGGCGACAC CGTGGTGGTT CACAGCATGG ATCGCTTGGC GCGCAACCTC 4900
GATGACTTGC GCCGCCTCGT ACAAAAGCTG ACCAAGCGCG GCGTGCGCAT CGAGTTCGTC AAGGAAAGCC TGACCTTCAC CGGCGAGGAT TCACCGATGG 5000
CGAACCTGAT GCTGTCGGTC ATGGGGGCAT TCGCCGAATT CGAGCGGGCC TTGATCCGTG AGCGGCAGCG CGAAGGCATC GCGCTCGCTA AGCAACGCGG 5100
AGCCTACCGA GGCCGAAAGA AGTCTCTGAG CGGTGAACAG ATTGCTGAAC TGAAACGGCG CGTCACGGCG GGCGAGCAAA AAGCGAAGCT GGCCCGTGAA 5200
TTTGGTGTCA GCCGGGAGAC CCTGTATCAA TACTTGAAAT TGGATCAATA AATATGCCTC GTCGTTCCAT ACTGTCCGCC GCCGAGCGGG AAAGCCTGTT 5300
GGCGTTGCCG GACACCAAGG ACGACCTAAT TCGACATTAC ACGTTCAGCG ATACCGATCT CTCCATCATC CGCCAGCGGC GCGGGCCTGC GAATCGCTTG 5400
GGCTTTGCCG TGCAGCTCTG CTACCTGCGC TTTCCCGGAA TCTTCCTTGG TGTCGATCAG GCGCCGTCTT TGCCCCTACT GAAACTGGTC GCCGACCAGC 5500
TCAAGGTCGG CGTCGAAAGC TGGGACGACT ACGGGCAGCG GGAGCAGACC CGGCGCGAGC ACCTGGTCGA GCTGCAAACG GTGTTTGGCT TCCAGCCGTT 5600
CACCATGAGC CACTACCGGC AGGCCGTGCA CACGCTGACC GACCTGGCCA TGCAAACCGA CAAAGGCATC GTGCTGGCTA GCACCTTGGT TGAGCATCTG 5700
CGGCGACAGT CGATCATCCT GCCCGCGCTC AACGCCATCG AGCGCGCTAG CGCCGAGGCC ATCACTCGCG CCAACCGGCG CATCTATGAC GCCTTGGCCG 5800
AACCACTGTC GGACACGCAT CGCCGCCGCC TCGACGATCT GCTCAGGCGC CGGGACAACG GCAAGACGAC CTGGCTGGCC TGGCTGCGCC AGTCGCCGGT 5900
TAAACCGAAC TCGCGGCACA TGCTGGAACA CATCGAACGC CTCAAGGCGT GGCAGGCGCT CGATCTGCCT TCCGGTATCG AGCGGTCGGT GCACCAGAAC 6000
CGCCTGCTCA AGATCGCCCG TGAGGGTGGC CAGATGACGC CCGCCGACTT AGCCAAGTTC GAGCCGCAAC GGCGCTACGC CACCCTCGTG GCGCTGGCCA 6100
TCGAGGGCAT GGCCACGGTC ACCGACGAAA TCATCGACTT GCACGACCGC ATCCTGGGCA AGCTGTTCAA CGCCGCCAAA AACAAGCATC AGCAGCAGTT 6200
TCAGGCATCC GGCAAGGCGA TCAACGCCAA GGTGCGGCTG TTCGGGCGCA TCGGCCAGGC GCTGATCGAG GCCAAGCAAG CTGGCCGCGA TCCGTTCGCC 6300
GCCATCGAGG CCGTCATGTC CTGGGATGCC TTCGCCGAAA GCGTCACCGA GGCGCAGAAG CTCGCTCAGC CCGATGACTT CGATTTCCTG CACCGCATCG 6400
GCGAAAGTTA CGCCACCTTG CGCCGCTACG CGCCGGAATT CCTTGCCGTG CTCAAGCTGC GGGCCGCACC CGCCGCCAAG AACGTGCTCG ATGCCATCGA 6500
GGTACTGCGT GGCATGAACA CCGACAACGC CCGCAAAGTG CCTGCCGATG CCCCGACCGA CTTCATCAAG CCGCGCTGGC AGAAGCTGGT GATGACTGAC 6600
GCGGGTATCG ACCGGCGCTA CTACGAGCTG TGCGCGCTGT CCGAGCTGAA GAACTCGCTG CGCTCGGGCG ACATCTGGGT GCAGGGATCG CGCCAGTTCA 6700
AGGACTTCGA GGACTACCTG GTGCCGCCCG CGAAGTTCGC CAGCCTCAAG CAGTCCAGCG CATTGCCGCT GGCCGTGGCC ACCGACTGCG ACCAGTACCT 6800
GCACGACCGC CTGACGCTGC TTGAAGCGCA GCTTGCCACG GTCAACCGCA TGGCAGCGGC CAACGACCTG CCGAATGCGA TCATCACCGA GTCGGGCCTG 6900
AAGATCACGC CGCTGGATGC GGCGGTACCC GACACCGCGC AGGCGCTGAT CGACCAGACA GCCATGATCC TGCCACACGT CAAGATCACC GAACTGCTGC 7000
TCGAAGTCGA TGAGTGGACG GGCTTCACCC GCCACTTCAC GCACCTGAAA TCGGGCGATC TGGCCAAGGA CAAAAATCTG CTGTTGACCA CCATCCTGGC 7100
CGACGCGATC AACCTGGGCC TGACCAAGAT GGCCGAGTCC TGCCCCGGCA CGACCTACGC CAAGCTCGCC TGGCTACAAG CCTGGCATAC CCGCGACGAA 7200
ACCTATTCGA CAGCGCTGGC CGAGTTGGTG AACGCCCAAT TCCGGCATCC CTTCGCCGAA CACTGGGGCG ACGGCACCAC GTCATCGTCG GACGGCCAGA 7300
ACTTCCGAAC CGGGAGCAAG GCCGAGAGTA CCGGTCACAT CAACCCGAAA TATGGCAGCA GCCCTGGGCG AACCTTCTAC ACCCATATAT CCGACCAGTA 7400
CGCGCCGTTC CACACCAAGG TGGTCAATGT CGGCGTGCGC GACTCGACCT ATGTACTTGA CGGCCTGCTG TACCACGAGT CCGACCTGCG CATCGAGGAA 7500
CACTACACCG ACACGGCAGG CTTCACCGAT CACGTCTTTG CCCTGATGCA TCTCCTGGGC TTCCGCTTTG CGCCGCGCAT CCGTGACCTG GGCGACACCA 7600
AGCTGTTCAT CCCCAAGGGG GATACCGCCT ATGACGCGCT CAAACCGATG ATTAGCAGCG ACAGGCTGAA CATCAAGGCT ATTCGTGCCC ACTGGGATGA 7700
AATTCTGCGG CTGGCGACCT CGATCAAGCA GGGCACGGTG ACAGCCTCGC TGATGCTTCG GAAACTCGGC AGCTATCCGC GCCAGAACGG CTTAGCCATC 7800
GCCCTGCGCG AGCTGGGGCG CATCGAACGC ACGCTGTTCA TCCTGGACTG GTTGCAAAGC GTGGAGCTGC GCCGCCGCGT CCACGCTGGA CTGAACAAGG 7900
GCGAAGCGCG CAACGCGCTG GCCCGCGCCG TATTCTTCAA CCGTCTGGGC GAAATCCGCG ACCGCAGCTT CGAGCAGCAG CGCTACCGGG CCAGCGGCCT 8000
CAACCTGGTG ACGGCGGCCG TCGTGTTGTG GAACACGGTC TATCTGGAGC GCGCAGCACA TGCGTTGCGT GGCAACGGGC ATGCTGTCGA TGACGCGCTA 8100
TTGCAATACC TGTCGCCGCT CGGCTGGGAA CACATCAACC TGACCGGCGA TTACCTCTGG CGCAGCAGCG CCAAGATCGG CGCGGGCAAG TTCAGGCCGC 8200
TACGACCGTT GCAACCGGCT TAGCGTGCTT TATTTTCCGT TTTCTGAGGC GACCCC
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| Recombination Sites |
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| Name |
Coordinates |
Gene |
Sequence |
| res_site_III |
4639-4670 |
32 |
TGCGGCGAAA GGTCATAGAT TTCTTCCTGA CA |
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| ORFs |
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| Gene Name |
Associated TE |
Coordinates |
Class |
Sub Class |
Orientation |
| merR |
Tn6203 |
55-489 |
Passenger Gene |
Heavy Metal Resistance |
- |
| merT |
Tn6203 |
561-911 |
Passenger Gene |
Heavy Metal Resistance |
+ |
| merP |
Tn6203 |
927-1202 |
Passenger Gene |
Heavy Metal Resistance |
+ |
| merA |
Tn6203 |
1274-2959 |
Passenger Gene |
Heavy Metal Resistance |
+ |
| merD |
Tn6203 |
2977-3342 |
Passenger Gene |
Heavy Metal Resistance |
+ |
| ufrM |
Tn6203 |
3572-4561 |
Passenger Gene |
Other |
+ |
| tnpR |
Tn6203 |
4691-5251 |
Accessory Gene |
Resolvase |
+ |
| tnpA |
Tn6203 |
5254-8223 |
Transposase |
|
+ |
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| merR |
MerR |
Tn6203 |
435 |
55-489 |
- |
| Class: | Passenger Gene |
| Sub Class: | Heavy Metal Resistance |
| Target: | Mercury |
Protein Sequence:
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MEKNLENLTI GVFAKAAGVN VETIRFYQRK GLLPEPDKPY GSIRRYGEAD VTRVRFVKSA QRLGFSLDEI AELLRLDDGT HCEEASSLAE HKLQDVREKM
TDLARMETVL SELVFACHAR QGNVSCPLIA SLQGEKEPRG ADAV
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| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| merT |
MerT |
Tn6203 |
351 |
561-911 |
+ |
| Class: | Passenger Gene |
| Sub Class: | Heavy Metal Resistance |
| Target: | Mercury |
Protein Sequence:
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MSEPQNGRGA LFTGGLAAIL ASACCLGPLV LIALGFSGAW IGNLTVLEPY RPIFIGAALV ALFFAWRRIY RPAQACKPGD VCAIPQVRAT YKLIFWVVAA
LVLVALGFPY VMPFFY
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| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| merP |
MerP |
Tn6203 |
276 |
927-1202 |
+ |
| Class: | Passenger Gene |
| Sub Class: | Heavy Metal Resistance |
| Target: | Mercury |
Protein Sequence:
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MKKLFASLAI AAVVAPVWAA TQTVTLSVPG MTCSACPITV KKAISKVEGV SKVNVTFETR EAVVTFDDAK TSVQKLTKAT EDAGYPSSVK K
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| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| merA |
MerA |
Tn6203 |
1686 |
1274-2959 |
+ |
| Class: | Passenger Gene |
| Sub Class: | Heavy Metal Resistance |
| Target: | Mercury |
Protein Sequence:
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MTHLKITGMT CDSCAAHVKE ALEKVPGVQS AIVSYAKGAA QLALDPGTAP DALTAAVAGL GYKAMLADAP PTDNRTGLFD KVRGWMGAAD KGSGGERPLQ
VAVIGSGGAA MAAALKAVEQ GAQVTLIERG TIGGTCVNVG CVPSKIMIRA AHIAHLRRES PFDGGMPPTP PTILRERLLA QQQARVEELR HAKYEGILDG
NSAITVLHGE ARFKDDQSLI VSLNEGGERV VMFDRCLVAT GASPAMPPIP GLKESPYWTS TEALVSDTIP ERLAVIGSSV VALELAQAFA RLGSQVTILA
RSTLFFREDP AIGEAVTAAF RAEGIKVLEH TQASQVAHVD GEFVLTTGQG EVRADKLLVA TGRTPNTRSL ALEAAGVAVN AQGAIVIDKG MRTSSPNIYA
AGDCTDQPQF VYVAAAAGTR AAINMTGGDA AINLTAMPAV VFTDPQVATV GYSEAEAHHD GIETDSRTLT LDNVPRALAN FDTRGFIKLV IEEGSGRLIG
VQVVAPEAGE LIQTAVLAIR NRMTVQELAD QLFPYLTMVE GLKLAAQTFS KDVKQLSCCA G
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| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| merD |
MerD |
Tn6203 |
366 |
2977-3342 |
+ |
| Class: | Passenger Gene |
| Sub Class: | Heavy Metal Resistance |
| Target: | Mercury |
Protein Sequence:
|
MNAYTVSRLA LEAGVSVHIV RDYLLRGLLR PVACTTGGYG LFDDAALQRL CFVRAAFEAG IGLDALARLC RALDAADCDE TAAQLAVLSQ FVERRREALA
DLEVQLAAMP TAPAQQAESL P
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| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| ufrM |
UfrM |
Tn6203 |
990 |
3572-4561 |
+ |
| Class: | Passenger Gene |
| Sub Class: | Other |
| Sequence Family: | EAL (Pfam:PF00563)||DUF3330 (Pfam:PF11809) |
| Comment: | similar to urfM from E.coli |
Protein Sequence:
|
MSASQPIEWT VAQLAQAVER GQLELHYQPI VDLRSEQIVG AEALLRWRHP TLGLLPPGQF LPVIESSGLM PEIGAWVLGA ACRQMRDWRV LAWQPFRLAV
NVAASQVGPD FDKWVKGVLA DAGLPAAYLE IELTESVAFG DPAIFPALEA LRQIGVRFAA DDFGTGYSCL QHLKCCPIST LKIDQSFVAG LANDHRDQTI
VRTVIQLAHG LGMEVVAEGV ETSASLDLLR QADCDTGQGF LFAKPMPAAA FAVFVSQWRG ATMNANDPTA TSCCVCCKEI PLDAAFTPEG AEYVEHFCGL
ECYQRFQARA KTGSETDADP NACDSSLSD
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| tnpR |
TnpR |
Tn6203 |
561 |
4691-5251 |
+ |
| Class: | Accessory Gene |
| Sub Class: | Resolvase |
| Transpoase Chemistry: | Serine |
| Sequence Family: | Serine Site-Specific Recombinase |
Protein Sequence:
|
MQGQRIGYVR VSSFDQNPER QLEHVEVGRV FTDKASGKDT QRPELDSLLA FVREGDTVVV HSMDRLARNL DDLRRLVQKL TKRGVRIEFV KESLTFTGED
SPMANLMLSV MGAFAEFERA LIRERQREGI ALAKQRGAYR GRKKSLSGEQ IAELKRRVTA GEQKAKLARE FGVSRETLYQ YLKLDQ
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| tnpA |
TnpA |
Tn6203 |
2970 |
5254-8223 |
+ |
| Class: | Transposase |
| Transpoase Chemistry: | DDE |
Protein Sequence:
|
MPRRSILSAA ERESLLALPD TKDDLIRHYT FSDTDLSIIR QRRGPANRLG FAVQLCYLRF PGIFLGVDQA PSLPLLKLVA DQLKVGVESW DDYGQREQTR
REHLVELQTV FGFQPFTMSH YRQAVHTLTD LAMQTDKGIV LASTLVEHLR RQSIILPALN AIERASAEAI TRANRRIYDA LAEPLSDTHR RRLDDLLRRR
DNGKTTWLAW LRQSPVKPNS RHMLEHIERL KAWQALDLPS GIERSVHQNR LLKIAREGGQ MTPADLAKFE PQRRYATLVA LAIEGMATVT DEIIDLHDRI
LGKLFNAAKN KHQQQFQASG KAINAKVRLF GRIGQALIEA KQAGRDPFAA IEAVMSWDAF AESVTEAQKL AQPDDFDFLH RIGESYATLR RYAPEFLAVL
KLRAAPAAKN VLDAIEVLRG MNTDNARKVP ADAPTDFIKP RWQKLVMTDA GIDRRYYELC ALSELKNSLR SGDIWVQGSR QFKDFEDYLV PPAKFASLKQ
SSALPLAVAT DCDQYLHDRL TLLEAQLATV NRMAAANDLP NAIITESGLK ITPLDAAVPD TAQALIDQTA MILPHVKITE LLLEVDEWTG FTRHFTHLKS
GDLAKDKNLL LTTILADAIN LGLTKMAESC PGTTYAKLAW LQAWHTRDET YSTALAELVN AQFRHPFAEH WGDGTTSSSD GQNFRTGSKA ESTGHINPKY
GSSPGRTFYT HISDQYAPFH TKVVNVGVRD STYVLDGLLY HESDLRIEEH YTDTAGFTDH VFALMHLLGF RFAPRIRDLG DTKLFIPKGD TAYDALKPMI
SSDRLNIKAI RAHWDEILRL ATSIKQGTVT ASLMLRKLGS YPRQNGLAIA LRELGRIERT LFILDWLQSV ELRRRVHAGL NKGEARNALA RAVFFNRLGE
IRDRSFEQQR YRASGLNLVT AAVVLWNTVY LERAAHALRG NGHAVDDALL QYLSPLGWEH INLTGDYLWR SSAKIGAGKF RPLRPLQPA
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