Transposon
Name: Tn4661
Family: Tn3        Group: Tn4651
Evidence of Transposition: yes
 Host     

Host Organism:Pseudomonas aeruginosa Molecular Source:plasmid Rms148
Date of Isolation:2013

 Map     



 Terminal Inverted Repeats (IR)     

IRL (Length: 47 bp)GGGGTCATGCCGAGATAAGGGGAAAATTCATTCATTTGGAATGTAAG
IRR (Length: 47 bp)GGGGGCATGCCGAGATAAGGGGGAAATTCATTCATTTGGTCTGTAAG

 Sequence     
DNA SequenceLength  12705 
--------10 --------20 --------30 --------40 --------50 --------60 --------70 --------80 --------90 -------100
GGGGTCATGC CGAGATAAGG GGAAAATTCA TTCATTTGGA ATGTAAGCCA TTGCTCTGAA AGGCTTTCTA TCCGGCAAGC GCTGGCTTGC ACCTCATGGT 100
CTATCTTTTC CGTCTGGTTC AAGGAAAGGA GTGACACATG GCATCCCTCG AACGTACCGC CTACCCTGTT TTGTCGCGCT CCTATTCGAG GGCCGAGCTT 200
CAGCGTGAAT TCAGCTTCTC CGAGGAAGAA GTCACGTGGG TCAAAAGTCG CTCTAATGCA GCATTCCGAC TGAATCTCGC TGTTCTGTTC AAGACTTTTC 300
AGGTACTCCG ATACTTTCCA GAAATCGCTG AAGTGCCGGA GCCAGTTGTC GATTTCATCC GCACACAAAT AGGTCTACGC AGCAAGGTTG CGCTATCACC 400
CTACAAGTGG ATGCAGCTTT ACCGCCATAT GAGTGCCGTT CGGGAAAAAC TTGGGGTTCG ACCGTTCTAC GGCTCGGATG GTCAAGACAT AGCATCCACG 500
CATGCACAGT TGATGGCTCC CCTCCTCGAA CAGCGCGCTG ACATTATTAA TGCGATCATT GACGAGTTGC TGCGCCAAAA CTACGAGCTG CCCGCCTATT 600
CGACCTTGAA TGACCTAGCA GAAGCCGCTC GTGCAGAAGC ACAAGAGAAA ATCTTCAACC TTGTGGTAGC CAGAGCTCCA ATCAAGGTGA TCTATAAGCT 700
AAGGGATCTT CTCGACACGG ACTTCGGGCG TCGGCAGAGT GACCTCAACA CACTCAAACA GGCACCCAAG AAACCCTCGC GCAAGCATCT GGAGGTACTG 800
ATCGACCACC TAGCCTGGCT AGAGAGTTTC GGGAAACTGG ATGCCATTTT TGATGGGATC GTCGATACGA AAATTCGCCA CTTTGCTGCC CAAGCTGCGG 900
CGTCGGATGT ATCTGAACTG AAGGACTGCT CGCTGCCGAA GCGTTACACG CTGATGCTTG CTTTGATCTA CCGTATGCGG GTGCGAACCC GAGATCACCT 1000
GGCCGAGATG TTCATCCGAA GAATCTCCAC GATCCACAAA CGCGCCAAGG AGGAGCTGGA GCAAATCCAG GCACGTCAAC GTCAGAAGTT GGAACAACTG 1100
GCGGCCACCC TGGACGGCGT GGTGCAGATT CTGGTTCAAG AGCCGGATGA CCAGGAGGCT GGTAGCCTGA TTCGAGAATA CCTCTCCCCC GATGGCAACA 1200
TGGATCGGTT GCGAGAGGTT TGTGCTGAAG TTCAGGCCAC AGGAGGTAAT AACTACTTGC CGCTGATCTG GAGGCACTTC AAGTCCCATC GTTCACTGCT 1300
GTTTCGCCTC AGCCACCTTC TCCAGTTGGA GCCCACCACC CAGGATCGCT CACTTATCCA GGCGCTTCAG CTCATTCAGG ACAGTGAGAA TCTGCACCGT 1400
GAATGGATCG ATGAGCATGT CGACTTGTCG TTTGCATCAG ATCGCTGGGT GAAGATCGTG CGTCGCCCTA CCAGTGAAGG GCCGCCTACC AACCGACGTT 1500
ATCTGGAGGT CTGCGTGTTC TCCTACCTGG CCAGTGAACT GCGCTCGGGT GATCTGTGCG TGCAGGGATC GGAATCCTTC GCCGACTACC GTAAACAGTT 1600
GCTGCCTTGG GAAGAGTGTC TCCAGCGGCT ACCGGCATAC TGCGAGAAGG TGGGCCTTCC TACCACAGCG AAGGAGTTTG TCGCCTCGCT CAAGAGCCAG 1700
TTGGAGGAAA CCGCGCAACA GTTAGATGAC AAGTTCCCTT CCTGTCGAGG GGATGTGTCG ATCAACGATG CAGGCGAGCC GGTACTGCGG CGGGTGATGG 1800
CACGGGACAT CCCGCCTTCA GCCATCTCGC TACAGACGGC GCTTATGCAG CGTATGCCAG CCAGGCACGT GCTGGACATT ATGGCCAACA TTGAGCACTG 1900
GATTCAGTTC ACGCGGCATT TCGGACCGAT GTCCGGCAAC GAGCCAAAGC TCAAAGAGCC GGCCGAGCGC TACCTGATGA CGATCTTCGC CATGGGCTGC 2000
AATCTCGGTC CCAGCCAGGC CGCGCGGCAT CTGGCCGGTA ATGTCACACC GCATATGCTG TCCTATACCA ATCGCCGCCA CCTCTCGCTG GAGAAACTGG 2100
ACAAGGCTAA TCGCGAGTTG GTGGAGCTCT ATCTGCAACT TGACCTGCCC AAGCTTTGGG GCGATGGCAA AGCAGTGGCC GCAGACGGTA CCCAGTTCGA 2200
CTTCTATGAC GACAACCTAC TGGCCGGCTA CCACTTCCGC TATCGCAAGA TGGGGGCCGT GGCGTACCGA CACGTGGCCA ACAACTACAT TGCAGTGTTC 2300
CAGCACTTCA TCCCGCCAGG CATCTGGGAG GCGATCTATG TGATAGAGGG ACTGCTCAAA GTCAGCCTTA GCGTCGAGCC CGATACGGTC TACTCCGACA 2400
CCCAGGGCCA GTCGGCCACA GTATTCGCCT TCACTCATCT CCTGGGTATC AATCTGATGC CGCGTATCCG CAACTGGCGC GACCTAGTGA TGTGCCGACC 2500
GGATCGAGGC GTATCGTACA AGCACATAAA CCGACTGTTC ACCGACACTG CCGACTGGCA CCTGATCGAA ACTCACTGGC AGGATCTGAT GCAGATTGCG 2600
CTGTCGATCC AGGCCGGCAA GATTTCCTCG CCCATGCTGC TACGTAAACT TGGCTCTTAC AGCCGGCGCA ACAAGCTCTA CCTCGCAGCA CAGACGCTGG 2700
GCAGTGTTAT CCGCACGATT TTCCTGCTCA ATTGGATTGG CAGCCGAGAG CTGCGCCAGG AGGTCACTGC GAACACCAAC AAGATCGAGT CCTACAACGG 2800
CTTCTCCAAG TGGCTCTCTT TTGGCGGCGA TGTAATTGCC GAAAACGATC CGGACGAGCA GCAGAAACGT CTGCGTTACA ACGACATGGT GGCTTCGTCG 2900
GTGATTCTGC AGAACACCGT GGACATGATG CGCATCTTGC AAAAACTAGC CCGCGAAGGG TGGCAGTTTA CCGATGAGGA CGTGTCCTTT CTTAGCCCCT 3000
ACCTGACCAG TAACGTCAAG CGTTTCGGCG AGTTCAACCT TAAGCTCAAC CGACCGCCGG AGCCCTGGAT CAAGGATTCG GTATTCCAAC AGGCTGCCGG 3100
CTCGTTGCGA GTCAACTCGA CCAGTAAGGC CGCGGCCGAG GAGGCAATAT GATCGAGATT GCGTCAGCGT CTTTTCGAGT CACACCCTAC GGTGAGGTGG 3200
ACATCGCAGC ACTGGACAGA ATGCGAGCCG GATTCGATAC ATCCCAACTT CTACGGCTAG TTGAAGGTCT GGATGCATGC CTCTCGGAAA TGGGTGGTAT 3300
CACCGCCTTG CGTGACGAAC TGCTGAAATT GCACGCAATG GCACTGACTA TCGTCGAGGG GACTGCCCCG GCTGCGCCCA CCGAGAACGC GTGTATCTGG 3400
GCTGAAGCAG AATCTGTGCA GTTGGGCCTA GAAGCGCTGG CGACGTGGAT TCGCTCCGCT CAGGGCTTCC TAACTCCCTT GACCAGTCTT GAGCCTGAGC 3500
ATCAGCAGTA GCTCGTTAAA CCGTATCAAG CCGAGCCGGA ATCAGCCCGG CTTGATCAGT GACCTAGCGA TTCGGTAGCC GCTGAGCGAT CACGACAAAG 3600
AAACGCCGGC ATTGCCCGAA CGTCGACCAG TTCAGCAGCC AATTTGACAA GGGGCTGCGT AATCATAAAA ATGTATATCT TTACTTGAGA CTATGACTCA 3700
TCATAACGAA TCGCTCGCGA AATTCGAAAC CTGACTTCTT ATAAAGACTT ACTGCTTTAG GATTATTTTC GTCCACTTCT AGATGAACTA TTGCGGCACC 3800
TTGAGACTTC AAGAAGGACT TGACCTTTTC TAGAATCTCA CTGCCAAATC CCTGTCCTCG GCACTGTTCA TCGATATAAA ATTCATCAAT CCAGACCTCA 3900
ATCCCCCTGA ACTCGATACT GTAGCAATTG CAAGTAGCAA TATATCCAAT CTGCTTGCTG CCAAGACAAA TAATCCAAAC GTTGCCCTTT TCTGAAGATG 4000
ACAAGAGAGG GCGAAGTGCA GCCAGCCTGT CTTCGTCAGT CATCTCAATA CCATCGTATA GGTGGTATTT TTTCATTAGC TCCACGAGTA AGAGCTCATC 4100
ATCTATTGAG GCTGAGATCA ACTTGATATT TGAATTTTTG CTCATGGCAT CTTCAGATCT TGGTCATCAT TATTACGCCG GCAACGATTA CGACTATGGC 4200
GCTCATGCGC TTATATGCGT CCGACGAGCT AAAGTTTTCG CTGAGTATCT TTGGGTCAAC TATTGCTAGC CAATGACTTA AGGCTAGCAC ATATACCGGG 4300
TGAAGACTGA CCAAAACCGA GACCACCGCA ACGTTTCCAC CAGCAGATAA TGCGCCAATA AAAAGCGCGT ATCCACCGGC GTCGAAGAGA TTGCTCAGCG 4400
CATACACCGC CCAGCCCTTT GGTGGCATTT CGGAGACATC CTTTGCGATG GAATGGCGCC ATTTCGGAAC CAGCAGCATC AGAGTCCCGC CAAGACCGTA 4500
GCCTGCATAG TTAAACATAA GAACCGAGGG CAGGCTGTGA CTCAGGAGCA GGTGATCGTA TAGTAGCGTA GCCACCGCCC CAAAAACTGC TGAACCTATT 4600
AGAAGCAATA CTGCTGATAA ACTTATCGAG CCTGGTCTCC CTTTGCCGAT TGCCACAGCA AAGTAAACCC CGACAAAAAC CAAGGCAATG CCGAGCAGCT 4700
CAATCCCTGT TGGCGAATAG CCAAGCAAGA GGATCGATAC GACAAGCACC AGCAAAGGAG TTAACTGATG AAGCGCAATC GCAGTAGAGA TATCGACCGA 4800
CTTCAGCGGC ATTGCGTATA GGAAATACAT TCCAAAAATG CATAATCCTG ACAGCAGGTT CAGAAGCGCT GAGGTTGTGT CAAAGTCAGA TGGTGTAAAG 4900
AGAAGAAAAA TCAGCGCAGA ATAAAGAAGA TTTCCAATGC TCAGGAGAAA TATAAATGTA GTCCAGTGAT TCGCATGATG GATCACTGCC AGCTTGTCCA 5000
GGATATTTGA AAGGCTCCAC AGCAGTGGAG CCATAAGTGC CATAACTAAC CAGGTCATTT TCCTCGAAGT ACCTCTAATA TGGTATCGCG ACTATCCTTC 5100
AATAAAACAT GAGAAAAGTC GTCGGTGTCA TGGTCAAATA TAAAGGTTCG CTGATAGTCG AAGCTCTCTG AAGTTTCGAA TTCCACAATC TTGTCTAGAA 5200
TCGCCTCAAC CTCATCAAAG CGATGAGAGT GATTAAGGCG AAGAATTTTC ATTGCATTAC CGTAATGGGC TGCCTCATCA CGGGCAGCAT ATCTAATCCA 5300
GGTTGAAAGA GACTCGTTTT CAAACGAGTC AAAGAAGCTT ACATCTTGCT TGTAGGCTCT TGTGCTGGTC ACTTCATCAA ATGCGATAGA GAGAAGAATT 5400
GTGAATTCAT CCTTCATGAA GTCTTCGATA TGAGAAAAGT CCGGAGAGTT CGATCTAATC TCGCGATCAA TCATGTCTTC CGGCATGGAG TAAAGTACGC 5500
TATTAATCTT TCTCAGTCCG CGATAATGAT TTTGCTCATC GAGATGCCAC AGGCATACGA ACTCGATAAA TTCATTGCTA AATTGAATGT CGCGACGGCC 5600
AAACAAGTAG CGCAAGAAGT TTATTGAATC AAATTCAGAG CTCATGTCAT GCCAAAAGAA AGGCCGACGC TCCTCGAGCT TTGAGGGATT CGACTTTATC 5700
TGTTCAATTG ACAAACCCTT CAGCAACTCC AGGGATGACC ATTCGTAGCT TTTAAGACCA ATACCCGACT TAACATTTGA CACTTGAACG CTCCTTGTTC 5800
AGAGGACAAA ATTTGAGAAC AGCCAGGGAG AGTCGCTATC TATGGCCGAA AAGGTGCCTG GGTTGTTTTT GGTAGGATTC CAGTCCGAAT AAACCCCTTT 5900
TAGTTCGCCT AGATACTGTG AAATATAAGA TAGTGCCACT TCATGATCCA TGTCTTCGGC TTCAATTATT CCTGCCGACG GATGGCTCAG TATCCATAAG 6000
TAACCGGAAA GAACTCCGGC TGCTACCTGT AACGTTGTTG CAGTGTTGAG AGTGGCAAGT TCCTTGGCCT TTTCGATGCT TAAGATAGAT CCATACCAAT 6100
AACTAGATTT TTCGTGCCCC ATAAGAAGAA CACCGAGGTA ATCAGAACCC GACAATATAT CACCAGGACG AAGTACTTTT GTCTTTTCTG GAGTCATGCA 6200
ATCATTGCCG AACCATTCAT GTACAGAGAG AATTGCTTCA TCGCTTGGGC GATAGGCATA ATGGACAGTT GGTCTATATG TCTCATCGGC AGTTCTGAGC 6300
GTCAAAAAGT CAGCAATTGA AATTGCCTCG TGATGAGTTA CCAAATAACC TAAGCTAGGG CCGTTAAATG GCGTCCATGT CTTAACTCTA ACAGAGGCCC 6400
CTGGCTTCTC AATATAGATT GCTGCTCCGC ATCCATCTGT ATGCATTGAC GCATCCGTGG GTAGACTTCG CTCGTGACTT CCCCAGCCCA ACTCTGCCGG 6500
TTGTTGCGAC TCACTTATGA ACCCATGCAC TGACCAAGTA TTTACGAACT CACCCCTCTC CCTAGATTTC TGAGAAATTT GCGAGTCGTA CTCTGCGACA 6600
TGGATTACTT TGACACCCAA TCTTTGGCTT AGGATAGCCC ACTGCTCTTT ATTAGAGGGC TTTTTACAAT CACCCAATAT CTCTTCCGCT AAATCTAAAA 6700
GAGCACGTTT AACGAAGTGG GATACCAACC CAGGATTCGC GCCATGCGCC ACGAGAGCCG TCACCCCTGA GCCTAGCCTC TTTTTCAGAG ACAGCATTTG 6800
TTCTCTTAAG TGATAGTTAG TTCGCTTATG CAGTGGTATG GTTGGGTCAT CATATCCGCC CTTCCACGGC TCAATGCATG TGTCTAAATA AAGAGCCCCT 6900
GCGGAGCGGC ATAATTCTAT CAGGGCAAGA CTTGAGACAT CGGTTGATAG ATTTATTAGA ACCGTCCCTT CACCAAGAAT CGGCACAAGA ATGTCGCGAT 7000
AGTTGATTTG ATCAATTGCA GAGTTGATAA ATTTTAAGCC AAAACTGTTA GCAAAGTACT CAATAAGCGG TGGTGTTTTT GGATCGATCG CGTAGATTTC 7100
TAAAGTAGAT AAGTCGTGAA CCTTAGAAAG GAGAGGAAGG AAGGACTGGG CAATCGTTCC TAGTCCCACA AAGACAATTC GCTGGGGGGG ATTAATTGAA 7200
AAATCCATTC AAGCATCCTT ACTGTCTATT ATGAAAATCT GTTTCCCTAT GCCTGCATGT CTACTTTGAA CTTGGCTGGC ATGTCAAATT ATTTTTCTGG 7300
ATCGCCTATA TTTTCTTTTT AAATCAAATA CTTAATCGAT AGTTAACTTC GGAGAGGGAG GTGCCAACTG GGCAGGTTTT AGTCAGCTCC GTGGCAAGTG 7400
ACAATGATTT TCACTTGCAC ATCACGCACT ATGCAGTTTT TGGGCTTGCC CGCTTGAAAC TCCCTTCTTA TCGCCGCACT CGTTGGAGCT TGCAATCAAG 7500
ACTGGCAGCC AGGCCCAGAG AAGGGGCCAG GCCTTAACCG CAGTGGAGCG CTTGACCAGC GTTTCGGTCG ACAAGGCCAG GATCAGATCT AACACTGTTG 7600
GCGGCAGCGG TGTTGATGGT CATGTGTCCC TGGACGTCTT CTTCTGTTGG GGAAAGAAGA AAAACGTCTT CTGCGGCGGC GCGATCAGGA TATCGGTGGA 7700
CTTGATGCTC GTGCCTTTGC GCCGCCTGCT CTTGCCTTCC TTGTCCACTG CCTGGATATC GCCGTTGGCC ACCGCGACAT CCAGGGCCAG CTTCACGCGA 7800
CTTTCGTCTG CCATGGTGAA GTTGGTGAGC TCCGTCATGA GCTGGATGAA GGGACGACGC TCGACTTCGA ATACCTGTTT GGGTAGCAGC TCGGACAGTT 7900
CCCCGCGAAT CCGGGTATCA GTCACTTGGT CGAACTGGTG TTCTCCTTCG CAGAGTAGGT CCGGCTGGCC GGTCACCCCC ACATCCCGGT TAGCGTCGTA 8000
ACCAAAGAAG CAGGACGGTG ATAACAGGTG GGAGAAATTG TTGCCGTACT TCCAGTGTAT GGCTTTCATC ACGTCGTTGG CGCGGTAGCT GTTCGCCAGG 8100
TGGATGAACC AGTAGGCCAT GGGGTTGGTG CCGTGTGGGC GAATGAAGAA CACCGTCATG AACTGCGCGC CGCTTTCCTG CTTGATCCCG TCCGACAGAT 8200
AGCGCTGGAT CAGGTACTGC CAATCCTGGG AGCTATGTGC TTTTAAGTGC CGTAGCTGTT CCCAGGGGAC ATACTGTTCT AGACCGATAC TGGCAATAGC 8300
CTTGCGGTTG GCGTGGCGGT CCGCTAGGTA CGTGATTAGA AAGTCGACAT TGAAGGTCAG CAGGACCTCA GCATTGCTGA GGTGCTGGAA GATCCATTTG 8400
ATCTGGCCGA ATGGCACGTC TCCGTAGCCG TACTGATCGA GCAGAAACAG AACGCGCTCG CTTTTTCCAA AGGCCTTGAG GCTTTGCGCA ATGGCCGGAA 8500
GAGCTTTGGT GAACTCGGCG GTATGCAGGT GAATGTCCTG TCCAATGCGG GCCTGATGTC CGCGGCTGGC CAGGACGGCG TGCAAGCAAG CAGTATTCTT 8600
CGGCTTCACA TCCACAAAGT GATGCTGCGA GCAGATCGGT CGATACTTGA TGCGCCCCAC GTTGTTGCGC ACTTCCGACT CCTGGATTGC TTCCAGGGCG 8700
ATCACCGGGG AGCCGAAGTG GTGACCGCCT GCGCTGTCGT TATATATACC TCCACCGCTG AAGCCATCGA CAATTGATAG GCCAAGCAGT GGCATTTGCT 8800
GATTCCGCAT CAGGACATCG ATGTAGGCCT GGATGTAGTC GTCGATGATC TGGTGCTTGA TCTTGCTGTG TGGGTCGATG GTGGGAAAGG TTTGGGTTGC 8900
CCAGTCCCAG CGGTACTTCT CGTCATCCTT GGCCATCGGG TCGTCCTTGT TTTGGTATCA GGCGAGGGTC AGCAGCGGAA TTTCATCCCA GGTCTGGCCC 9000
TTCAGCAGCC GGCCATTAGC TTTCTTTGAA CGCTTCACGC CATCGGAGCC CCAGCCGCCC CATTGTTTGA AAAAGAAAGC AGCGCCAAAG GCATCGCACT 9100
GGCGGTGGAT GTTATCCACC CACTCCTGCT TCATTGGCCG GGCCTTGGCG CCGGACTCGC CGCCGACGAT GACCCAATGG ATGTCAGTCA GGTTCAGTTC 9200
ACCCAAGTCT TCTAGTAAGG GTTCCGCGGA GAGGAAACGG ATCGCGGCGT TGATGCCACG CAGGCAGTCG ATTCTGGGCA CGCCGTACTC CCGGTCCTCG 9300
ACCGAGACCC CCAGCCAAGC GTTGGCCGGC GGTGTGCGCT GGCTGAAATA GTCGGCCAGG CGCTCGGCCC GCTTAGTGAG GATCTGGAAG GTGTGCTGTG 9400
AGGCCTGGTG GATAACCGCG AACACCTGGT CGATGTAGGT GTCCGGCACC TGCTCATGGA ACAGGTCAGA CATGGAATTG ACAAAGTAGA TGGTCGGCTT 9500
CTTGCGCTGC AGAGGCTCCT GCAGTTTCTC TGGGCGCAGG CTGAGGCGAA AGCCGTTCTC GTAGCCGGGC GTGCCCATGG CCTGCAAGCG ACGCGCCATG 9600
TTCTCGGCAT AGCAGTGTTT GCAGCCCGGC GACACCTTGG TGCAACCCAC CACCGGGTTC CAGGTCATTT CCGTCCATTC GATGCTGGTC TGCGTACTCA 9700
TTGCACCGTC ACTCCTGTCG TGCGTCGATG TTAGTGAGAA GCTGGCACTT GAGTCAAAGT GCTGGCATTT AGTTCGAGAG CAGGCCTCGC AGCGAGGCCG 9800
CCAAAGGAGA TGGCAGGGTC GATGTAGCGC ATCGCCGATT TGATGTCCTT CCACCCCACG TAGGTCATTA ACGCCTTAAT GTCCCAGCCA TTGGCCGTGG 9900
CCCAGGTGGC GAAGCCTCGA CGCAATGAGT GGCTGGTGTA AAGGTCAGCC TGGATCCCCG CACGCTGGAG TATCTGCCGC AGTAGGACGA TCAGACTGCC 10000
AGGATTCAAG CCAGCCTCGT TCAAGTTGCC CCAACGGTCC AGCCGACGAA AAACCATCCC TCGAGCAATC CCTGCTGCAC CGATCCAGTC GAGATAGGCC 10100
TGTACTGGGC ACAGCCGCCT CAGCGCAGGT ACGTAGTGAG TGGTGCCAAG GTTGTCCCGG TCACCCTTGC TCCAAGGCAA AAACAGCGTC ATGCCAGCAC 10200
CGGCTTCGGC TTGAATGTGC TCCACCTGCA AGCGGCACAG TTCATCGCTA CGAAAGCCTC GCCAGAAGCC GATTAGTAGC AATGCCGTAT CCCGCCGACA 10300
GCGCAAATAT CCCGCCAGGT CTTCGGCTTG AAACAGACAC ATAGCCTCCT GCTCCAACCA CTCAACCGCA TGCTCCAGAT GCTGTAATTG CAGCGGCGCG 10400
GCCTGCTTTG TCTGGCTCGG GTGCAGGGTG CGAATTCCCT TCAGTACCTG GTGTACGGTC GGGGTCTTGG TGGGATCGGG GAAGCCGTGC CTGATATGCC 10500
ACTGCGCGAG GGCGGCGAGG CGCTGCTTTA GCGTGTTGAG GCTCAGCGTG TCGGCGTAGT CCACCAGGTA ACGCACGATG GAGTCACTCG TGGCCGGCAA 10600
GAAGCCGCCC CAGGTCACCT CGAAATGTTC GACGGCCGAC TGGTAGCTAC GCCGGGTGTT TTCCCGCGTG CCGGCTTGCA GGTAGCGCTC GACGTCCTTC 10700
ATCGCCCGTG CGTGCCCTTT GTGTACTGGG AAACGACCGC GAAGCAGCCG TTTTTGCCAA TCATATTGAA TAATCATCGG TTATTTTATC TGAAACAAGC 10800
CTTCAAATCC TGCTTTACTT CATGACAATT TAGTATGTAA ATACATGGTA TGTAATCCAT TATGAAATCG TAGGAGCAGA CCATGGCCCG CGGCGGCATC 10900
AACAAGGCAC TGGTTCAGAA AGCCCGCCAG GCCATCCTGG CGCGGGGTGA GAATCCCAGC ATCGACGCAA TACGGGTCGA GCTGGGCAAT ACCGGCTCGA 11000
AAACCACCAT CCATCGCTAC CTGAAAGAAC TCGAAGACGC CGACCGCGGC CGGAACGCGG CCGCATTGCC GCTCAGCGAG CAGTTGGCCA ACCTGGTGGC 11100
CCAGTTGGCG GATCAGCTCA AGGAGGAAGC GCAGGCCGAC ATGGCCCAGG AGCGCGAACA ACTGGCACGG GAACGACTCG ATTACCAGAA CCAGATTCGG 11200
CAGGCCGAAA GCCGTATCCA GCAGCTGGAA GGTCAGCGCG CTGGGCTCAC GGAGCAGTTC CAGGCTGCCC AGCAAGCACT GCTGCAGGAA CAACAGCTGC 11300
GCCAACAGGC CGAGGTCGAG AATGCCCGCC TGCAGCAAGC CAACCACGAC CAGGAAGCGC GCCTGCAAGA CCGCGACGGG CAGATTCGCT CGCTGGAGGA 11400
CAAGCATCAG CATGCCCGTG ATGCCCTGGA GCACTATCGC CAGGCCAGCA AGGAGCAGCG TGAGCAAGAG CAGCGCCGGC ACGAGTCGCA GGTACAACAA 11500
CTGCAACTGG AACTGCGACA GCTACAGCAG ACCCTGATCG TCAAGCAGGA CGAGCTGACC CACCTGAACC GCGACAATGC GCGCCTGCTT GCCGAGGCGC 11600
GGCAGCAGCA GAAGGATCAG CATGCGCAGC AGAAGCTACT GACGCAGAAG GCTCAGGCTC TGGAGGTCGC CCAGAACACG CTGACCAGCA TTGTACGTAC 11700
GAATGAAGCC CTGGAGCAGC GCTGCCACGC TCTGCAGGAT GAGGTGACCC GGCTTGGTGA AGCCTCCTCG ATTCAGGCAC AGCAAACCCA GAGCCTGCAG 11800
GAGCGTCTGG CTAAAGCCAC CGCGCAACTG AAATTGCTCG GGCAGGCACC GCCCACGAGC AGCGGTGGCG CAAGTAGCTC ATGATCCGGC ACACTGAGGT 11900
CAGAAGCGGA GTGGAGGTTC AGATGACGCT ACCCTACGAA CGTACCCGCT CGGTGGTGCA GGCCCAGGAG TTTCTCGTCG AGCTCTCTCG TGACACCACC 12000
TTGTCGGAGT CCATCCGCAA TGAGGCTCGG CGGCTGCTGT GTCACTACCC GAGCAAGGGC GACATGCTGC AGGCCGGCCG GAATGAGGAG CAAGCGGCGG 12100
GTTCGATTTT CGAGCCTGTC TTCAGCTCTT CGATTGAAGA CTGAACGGCT ACCACTCCTG ATATCTGCGC TCAGGCTCAG CCATCGCCCC AGAATTCGTC 12200
ACGCCGCACC AGGCCGAACT CATCCTTCGT GGAATCAGGC TCCTCGTCGA ACATGGCGTT GACCATGCGC TCGCGACGTA GGCCGCTTAG TGTGCGGAAA 12300
AACCAAAGCT CGCAAAGATG AACCTTGTAG CGCTCGCCAT CATGCTTGGA GCCATACCCC CAGTGTGCCT GAAGGGTTCC AAACTGTTGA CCATAACCTT 12400
CAACGCTAGT GCTCTGGCGG CAAACATCAC AGGTAATGTC TACGACCGTT TCAACCGGTT GAGCGGCAGT GTGCTCCATG ATCAGTACCT CCTGCGACGG 12500
TTGAGGAAAG GGCCATCCAA AAGCCTCAAA GTCGTTTCTG CGCTACGAGC GGATCAAAAA CGCTGTCGGC GGATGGGAAT GGAGTTCGCA GCACAAGATA 12600
GAGGCGGGTG TGGTTAATGC GATCATCGCC CTAGGGCTTT CATGATCAAA AACAGCTACT TACAGACCAA ATGAATGAAT TTCCCCCTTA TCTCGGCATG 12700
CCCCC

 Recombination Sites     

Name Coordinates Gene Sequence
res 10721-10856 136 GTGTACTGGG AAACGACCGC GAAGCAGCCG TTTTTGCCAA TCATATTGAA TAATCATCGG
TTATTTTATC TGAAACAAGC CTTCAAATCC TGCTTTACTT CATGACAATT TAGTATGTAA
ATACATGGTA TGTAAT
res_core_IRL 10761-10773 13 TCATATTGAA TAA
res_core_IRR 10781-10793 13 TTATTTTATC TGA
res_acc_IR1 10831-10839 9 TAGTATGTA
res_acc_IR2 10842-10850 9 TACATGGTA

 ORFs     
ORF Summary
Gene Name Associated TE Coordinates Class Sub Class Orientation
tnpA Tn4661 138-3152 Transposase   +
tnpC Tn4661 3149-3511 Accessory Gene Inhibitor +
GNAT_fam Tn4661 3681-4145 Passenger Gene Antibiotic Resistance -
eamA family Tn4661 4153-5058 Passenger Gene Other -
WP_003111046.1 Tn4661 5055-5783 Passenger Gene Hypothetical -
homospermidine synthase Tn4661 5799-7208 Passenger Gene Other -
tcmP Tn4661 7620-8936 Passenger Gene Other -
Gp37Gp68 family Tn4661 8958-9701 Passenger Gene Other -
tnpS Tn4661 9731-10702 Accessory Gene Resolvase -
tnpT Tn4661 10883-11884 Accessory Gene Resolvase +
WP_031628629.1 Tn4661 12177-12479 Passenger Gene Hypothetical -

ORF Details
Gene Name Protein Name Associated TE Gene Length Coordinates Strand
tnpA TnpA Tn4661 3015 138-3152 +
Class:   Transposase
Transpoase Chemistry:   DDE
Protein Sequence:  
MASLERTAYP VLSRSYSRAE LQREFSFSEE EVTWVKSRSN AAFRLNLAVL FKTFQVLRYF PEIAEVPEPV VDFIRTQIGL RSKVALSPYK WMQLYRHMSA
VREKLGVRPF YGSDGQDIAS THAQLMAPLL EQRADIINAI IDELLRQNYE LPAYSTLNDL AEAARAEAQE KIFNLVVARA PIKVIYKLRD LLDTDFGRRQ
SDLNTLKQAP KKPSRKHLEV LIDHLAWLES FGKLDAIFDG IVDTKIRHFA AQAAASDVSE LKDCSLPKRY TLMLALIYRM RVRTRDHLAE MFIRRISTIH
KRAKEELEQI QARQRQKLEQ LAATLDGVVQ ILVQEPDDQE AGSLIREYLS PDGNMDRLRE VCAEVQATGG NNYLPLIWRH FKSHRSLLFR LSHLLQLEPT
TQDRSLIQAL QLIQDSENLH REWIDEHVDL SFASDRWVKI VRRPTSEGPP TNRRYLEVCV FSYLASELRS GDLCVQGSES FADYRKQLLP WEECLQRLPA
YCEKVGLPTT AKEFVASLKS QLEETAQQLD DKFPSCRGDV SINDAGEPVL RRVMARDIPP SAISLQTALM QRMPARHVLD IMANIEHWIQ FTRHFGPMSG
NEPKLKEPAE RYLMTIFAMG CNLGPSQAAR HLAGNVTPHM LSYTNRRHLS LEKLDKANRE LVELYLQLDL PKLWGDGKAV AADGTQFDFY DDNLLAGYHF
RYRKMGAVAY RHVANNYIAV FQHFIPPGIW EAIYVIEGLL KVSLSVEPDT VYSDTQGQSA TVFAFTHLLG INLMPRIRNW RDLVMCRPDR GVSYKHINRL
FTDTADWHLI ETHWQDLMQI ALSIQAGKIS SPMLLRKLGS YSRRNKLYLA AQTLGSVIRT IFLLNWIGSR ELRQEVTANT NKIESYNGFS KWLSFGGDVI
AENDPDEQQK RLRYNDMVAS SVILQNTVDM MRILQKLARE GWQFTDEDVS FLSPYLTSNV KRFGEFNLKL NRPPEPWIKD SVFQQAAGSL RVNSTSKAAA
EEAI

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
tnpC TnpC Tn4661 363 3149-3511 +
Class:   Accessory Gene
Sub Class:   Inhibitor
Protein Sequence:  
MIEIASASFR VTPYGEVDIA ALDRMRAGFD TSQLLRLVEG LDACLSEMGG ITALRDELLK LHAMALTIVE GTAPAAPTEN ACIWAEAESV QLGLEALATW
IRSAQGFLTP LTSLEPEHQQ

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
GNAT_fam GNAT_fam Tn4661 465 3681-4145 -
Class:   Passenger Gene
Sub Class:   Antibiotic Resistance
Target:   aminoglycoside antibiotic (ARO:0000016)
Sequence Family:  Acetyltransf_1 (Pfam:PF00583)
Comment:   putative acetyltransferase
Protein Sequence:  
MSKNSNIKLI SASIDDELLL VELMKKYHLY DGIEMTDEDR LAALRPLLSS SEKGNVWIIC LGSKQIGYIA TCNCYSIEFR GIEVWIDEFY IDEQCRGQGF
GSEILEKVKS FLKSQGAAIV HLEVDENNPK AVSLYKKSGF EFRERFVMMS HSLK

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
eamA family EamA family Tn4661 906 4153-5058 -
Class:   Passenger Gene
Sub Class:   Other
Comment:   transmembrane transporter
Protein Sequence:  
MTWLVMALMA PLLWSLSNIL DKLAVIHHAN HWTTFIFLLS IGNLLYSALI FLLFTPSDFD TTSALLNLLS GLCIFGMYFL YAMPLKSVDI STAIALHQLT
PLLVLVVSIL LLGYSPTGIE LLGIALVFVG VYFAVAIGKG RPGSISLSAV LLLIGSAVFG AVATLLYDHL LLSHSLPSVL MFNYAGYGLG GTLMLLVPKW
RHSIAKDVSE MPPKGWAVYA LSNLFDAGGY ALFIGALSAG GNVAVVSVLV SLHPVYVLAL SHWLAIVDPK ILSENFSSSD AYKRMSAIVV IVAGVIMMTK
I

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
WP_003111046.1 WP_003111046.1 Tn4661 729 5055-5783 -
Class:   Passenger Gene
Sub Class:   Hypothetical
Protein Sequence:  
VSNVKSGIGL KSYEWSSLEL LKGLSIEQIK SNPSKLEERR PFFWHDMSSE FDSINFLRYL FGRRDIQFSN EFIEFVCLWH LDEQNHYRGL RKINSVLYSM
PEDMIDREIR SNSPDFSHIE DFMKDEFTIL LSIAFDEVTS TRAYKQDVSF FDSFENESLS TWIRYAARDE AAHYGNAMKI LRLNHSHRFD EVEAILDKIV
EFETSESFDY QRTFIFDHDT DDFSHVLLKD SRDTILEVLR GK

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
homospermidine synthase Homospermidine synthase Tn4661 1410 5799-7208 -
Class:   Passenger Gene
Sub Class:   Other
Protein Sequence:  
MDFSINPPQR IVFVGLGTIA QSFLPLLSKV HDLSTLEIYA IDPKTPPLIE YFANSFGLKF INSAIDQINY RDILVPILGE GTVLINLSTD VSSLALIELC
RSAGALYLDT CIEPWKGGYD DPTIPLHKRT NYHLREQMLS LKKRLGSGVT ALVAHGANPG LVSHFVKRAL LDLAEEILGD CKKPSNKEQW AILSQRLGVK
VIHVAEYDSQ ISQKSRERGE FVNTWSVHGF ISESQQPAEL GWGSHERSLP TDASMHTDGC GAAIYIEKPG ASVRVKTWTP FNGPSLGYLV THHEAISIAD
FLTLRTADET YRPTVHYAYR PSDEAILSVH EWFGNDCMTP EKTKVLRPGD ILSGSDYLGV LLMGHEKSSY WYGSILSIEK AKELATLNTA TTLQVAAGVL
SGYLWILSHP SAGIIEAEDM DHEVALSYIS QYLGELKGVY SDWNPTKNNP GTFSAIDSDS PWLFSNFVL

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
tcmP TcmP Tn4661 1317 7620-8936 -
Class:   Passenger Gene
Sub Class:   Other
Comment:   three-Cys-motif partner protein TcmP
Protein Sequence:  
MAKDDEKYRW DWATQTFPTI DPHSKIKHQI IDDYIQAYID VLMRNQQMPL LGLSIVDGFS GGGIYNDSAG GHHFGSPVIA LEAIQESEVR NNVGRIKYRP
ICSQHHFVDV KPKNTACLHA VLASRGHQAR IGQDIHLHTA EFTKALPAIA QSLKAFGKSE RVLFLLDQYG YGDVPFGQIK WIFQHLSNAE VLLTFNVDFL
ITYLADRHAN RKAIASIGLE QYVPWEQLRH LKAHSSQDWQ YLIQRYLSDG IKQESGAQFM TVFFIRPHGT NPMAYWFIHL ANSYRANDVM KAIHWKYGNN
FSHLLSPSCF FGYDANRDVG VTGQPDLLCE GEHQFDQVTD TRIRGELSEL LPKQVFEVER RPFIQLMTEL TNFTMADESR VKLALDVAVA NGDIQAVDKE
GKSRRRKGTS IKSTDILIAP PQKTFFFFPQ QKKTSRDT

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
Gp37Gp68 family Gp37Gp68 family Tn4661 744 8958-9701 -
Class:   Passenger Gene
Sub Class:   Other
Comment:   phage Gp37Gp68 family protein
Protein Sequence:  
MSTQTSIEWT EMTWNPVVGC TKVSPGCKHC YAENMARRLQ AMGTPGYENG FRLSLRPEKL QEPLQRKKPT IYFVNSMSDL FHEQVPDTYI DQVFAVIHQA
SQHTFQILTK RAERLADYFS QRTPPANAWL GVSVEDREYG VPRIDCLRGI NAAIRFLSAE PLLEDLGELN LTDIHWVIVG GESGAKARPM KQEWVDNIHR
QCDAFGAAFF FKQWGGWGSD GVKRSKKANG RLLKGQTWDE IPLLTLA

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
tnpS TnpS Tn4661 972 9731-10702 -
Class:   Accessory Gene
Sub Class:   Resolvase
Function:   cointegrate resolution
Transpoase Chemistry:   Tyrosine
Sequence Family:  Tyrosine Site-Specific Recombinase
Comment:   similar to orfI integrase-like protein of the Pseudomonas sp. transposon Tn5041
Protein Sequence:  
MKDVERYLQA GTRENTRRSY QSAVEHFEVT WGGFLPATSD SIVRYLVDYA DTLSLNTLKQ RLAALAQWHI RHGFPDPTKT PTVHQVLKGI RTLHPSQTKQ
AAPLQLQHLE HAVEWLEQEA MCLFQAEDLA GYLRCRRDTA LLLIGFWRGF RSDELCRLQV EHIQAEAGAG MTLFLPWSKG DRDNLGTTHY VPALRRLCPV
QAYLDWIGAA GIARGMVFRR LDRWGNLNEA GLNPGSLIVL LRQILQRAGI QADLYTSHSL RRGFATWATA NGWDIKALMT YVGWKDIKSA MRYIDPAISF
GGLAARPALE LNASTLTQVP ASH

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
tnpT TnpT Tn4661 1002 10883-11884 +
Class:   Accessory Gene
Sub Class:   Resolvase
Function:   cointegrate resolution
Comment:   similar to orfQ of the Pseudomonas sp. transposon Tn5041
Protein Sequence:  
MARGGINKAL VQKARQAILA RGENPSIDAI RVELGNTGSK TTIHRYLKEL EDADRGRNAA ALPLSEQLAN LVAQLADQLK EEAQADMAQE REQLARERLD
YQNQIRQAES RIQQLEGQRA GLTEQFQAAQ QALLQEQQLR QQAEVENARL QQANHDQEAR LQDRDGQIRS LEDKHQHARD ALEHYRQASK EQREQEQRRH
ESQVQQLQLE LRQLQQTLIV KQDELTHLNR DNARLLAEAR QQQKDQHAQQ KLLTQKAQAL EVAQNTLTSI VRTNEALEQR CHALQDEVTR LGEASSIQAQ
QTQSLQERLA KATAQLKLLG QAPPTSSGGA SSS

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
WP_031628629.1 WP_031628629.1 Tn4661 303 12177-12479 -
Class:   Passenger Gene
Sub Class:   Hypothetical
Protein Sequence:  
MEHTAAQPVE TVVDITCDVC RQSTSVEGYG QQFGTLQAHW GYGSKHDGER YKVHLCELWF FRTLSGLRRE RMVNAMFDEE PDSTKDEFGL VRRDEFWGDG


 References