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| Name: Tn1412 |
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| Family: Tn3 Group: Tn3 |
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| Evidence of Transposition: no |
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| Host |
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| Host Organism: | Pseudomonas aeruginosa 2293E | | |
| | Date of Isolation: | 2001 |
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| Map |
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| Terminal Inverted Repeats (IR) |
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| Sequence |
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--------10 --------20 --------30 --------40 --------50 --------60 --------70 --------80 --------90 -------100
GGGGTTTGGG GAGCAATGGA ACCAAAAACC AACGTAAGCC CTACCAACGC TTTTCGGTGT CTTCTTCCCA GGCGCCCATC TCGACAAAAC AGTTGCGCAT 100
GTCGGCCTCC TGGCTGATCT CGGTCAGCAG GTCATGCACG CTCTTGTCCA GCTCATCGTC GCTCCGATAC GGAATGGTCA ACTCATAGTG GCCGGCATCC 200
AGCCGCTTCA TGCCATAGGG CTCCAGGCAG TAGCGCTCAA TGTTCTCCGT GGCCCGCTTC CGGCCGCGCA CGAACTTGCT GTTATTCACC ACCGCGAGGC 300
GCAGGGTGAC GGTGGCCACC CGCTCGGCGG CGGGCGGCTC TGCCGGCGAC GCGGCCGAAG CGTGCTGGTC GCGTGACCTG GCGCTCTTCT GGTACGCGCC 400
GATCTCGACA CCACGGTGGC GCAGGTAGCT GTACAGCGTG CTCTTGGAGA TGTGCAGCTT CTCGCCGATC GCGCTGACGC TCAGGCGACC TTCGCGGTAG 500
AGGGTTTCGG CCGCCATGGC GGTGGCCTCA GCCTTGGCTG GCAGGCCCTT GGGACGGCCA CCGATCCGGC CACGCGCCCG TGCGGCCGAC AGACCCGCCT 600
GAGTCCGCTC GCGGATCAGC TCGCGCTCGA ACTCCGCCAG CGAGGCGAAC AGGTTGAACA CCAGGCGGCC TTGGGCGTGG GTGGTGTCGA TGGGGTCATT 700
CAGGCTCTGT AAGCCGACCT TGCGCTCTGC CAGCTCGCCG ACCAACTCGA CCAGGTGCTT GAGGGAACGC CCAAGGCGAT CCAGCTTCCA GATCACCACG 800
GCATCACCCG GCCGCACGTT GGCCAGCAGT TTGTCCAACT CCGGCCGGGC GCTTTTCGCG CCGCTGGCGA TGTCTTGGTA GATGCGTTCG CACCCGGCCT 900
GTTTCAGGGC ATCGACTTGT AGGTCGGCTT TCTGATCCCG AGTGCTCACT CGCGCATAAC CGATCTTCAT CAAAAGTACT GTTTACTCGA CTACGTTAGT 1000
AATAGTTGAA CTTTGATTAA GCGTACCAGT TATTTGAACC GTAGCGCGGG GAGCTTAACG AACCGAGCCT GTCGTTTTCA GAAGACGGCT GCACTGAACG 1100
TCAGAAGCCG ACTGCACTAT AGCAGCGGAG GGGTTGGATC CATCAGGCAA CGACGGGCTG CTGCCGGCCA TCAGCGGACG CAGGGAGGAC TTTCCGCAAC 1200
CGGCCGTTCG ATGCGGCACC GATGGCCTTC GCGCAGGGGT AGTGAATCCG CCAGGATTGA CTTGCGCTGC CCTACCTCTC ACTAGTGAGG GGCGGCAGCG 1300
CATCAAGCGG TGAGCGCACT CCGGCACCGC CAACTTTCAG CACATGCGTG TAAATCATCG TCGTAGAGAC GTCGGAATGG CCGAGCAGAT CCTGCACGGT 1400
TCGAATGTCG TAACCGCTGC GGAGCAAGGC CGTCGCGAAC GAGTGGCGGA GGGTGTGCGG TGTGGCGGGC TTCGTGATGC CTGCTTGTTC TACGGCACGT 1500
TTGAAGGCGC GCTGAAAGGT CTGGTCATAC ATGTGATGGC GACGCACGAC ACCGCTCCGT GGATCGGTCG AATGCGTGTG CTGCGCAAAA ACCCAGAACC 1600
ACGGCCAGGA ATGCCCGGCG CGCGGATACT TCCGCTCAAG GGCGTCGGGA AGCGCAACGC CGCTGCGGCC CTCGGCCTGG TCCTTCAGCC ACCATGCCCG 1700
TGCACGCGAC AGCTGCTCGC GCAGGCTGGG TGCCAAGCTC TCGGGTAACA TCAAGGCCCG ATCCTTGGAG CCCTTGCCCT CCCGCACGAT GATCGTGCCG 1800
TGATCGAAAT CCAGATCCTT GACCCGCAGT TGCAAACCCT CACTGATCCG CATGCCCGTT CCATACAGAA GCTGGGCGAA CAAACGATGC TCGCCTTCCA 1900
GAAAACCGAG GATGCGAACC ACTTCATCCG GGGTCAGCAC CACCGGCAAG CGCCGCGACG GCCGAGGTCT TCCGATCTCC TGAAGCCAGG GCAGATCCGT 2000
GCACAGCACC TTGCCGTAGA AGAACAGCAA GGCCGCCAAT GCCTGACGAT GCGTGGAGAC CGAAACCTTG CGCTCGTTCG CCAGCCAGGA CAGAAATGCC 2100
TCGACTTCGC TGCTGCCCAA GGTTGCCGGG TGACGCACAC CGTGGAAACG GATGAAGGCA CGAACCCAGT GGACATAAGC CTGTTCGGTT CGTAAGCTGT 2200
AATGCAAGTA GCGTATGCGC TCACGCAACT GGTCCAGAAC CTTGACCGAA CGCAGCGGTG GTAACGGCGC AGTGGCGGTT TTCATGGCTT GTTATGACTG 2300
TTTTTTTGTA CAGTCTATGC CTCGGGCATC CAAGCAGCAA GCGCGTTACG CCGTGGGTCG ATGTTTGATG TTATGGAGCA GCAACGATGT TACGCAGCAG 2400
GGCAGTCGCC CTAAAACAAA GTTAGGCCGC ATGGACACAA CGCAGGTCAC ATTGATACAC AAAATTCTAG CTGCGGCAGA TGAGCGAAAT CTGCCGCTCT 2500
GGATCGGTGG GGGCTGGGCG ATCGATGCAC GGCTAGGGCG TGTAACACGC AAGCACGATG ATATTGATCT GACGTTTCCC GGCGAGAGGC GCGGCGAGCT 2600
CGAGGCAATA GTTGAAATGC TCGGCGGGCG CGTCATGGAG GAGTTGGACT ATGGATTCTT AGCGGAGATC GGGGATGAGT TACTTGACTG CGAACCTGCT 2700
TGGTGGGCAG ACGAAGCGTA TGAAATCGCG GAGGCTCCGC AGGGCTCGTG CCCAGAGGCG GCTGAGGGCG TCATCGCCGG GCGGCCAGTC CGTTGTAACA 2800
GCTGGGAGGC GATCATCTGG GATTACTTTT ACTATGCCGA TGAAGTACCA CCAGTGGACT GGCCTACAAA GCACATAGAG TCCTACAGGC TCGCATGCAC 2900
CTCACTCGGG GCGGAAAAGG TTGAGGTCTT GCGTGCCGCT TTCAGGTCGC GATATGCGGC CTAACAATTC GTCCAAGCCG ACGCCGCTTC GCGGCGCGGC 3000
TTAACTCAGG TGTTAAACAT CATGAGGGAA GCGGTGATCG CCGAAGTATC GACTCAACTA TCAGAGGTAG TTGGCGTCAT CGAGCGCCAT CTCGAACCGA 3100
CGTTGCTGGC CGTACATTTG TACGGCTCCG CAGTGGATGG CGGCCTGAAG CCACACAGTG ATATTGATTT GCTGGTTACG GTGACCGTAA GGCTTGATGA 3200
AACAACGCGG CGAGCTTTGA TCAACGACCT TTTGGAAACT TCGGCTTCCC CTGGAGAGAG CGAGATTCTC CGCGCTGTAG AAGTCACCAT TGTTGTGCAC 3300
GACGACATCA TTCCGTGGCG TTATCCAGCT AAGCGCGAAC TGCAATTTGG AGAATGGCAG CGCAATGACA TTCTTGCAGG TATCTTCGAG CCAGCCACGA 3400
TCGACATTGA TCTGGCTATC TTGCTGACAA AAGCAAGAGA ACATAGCGTT GCCTTGGTAG GTCCAGCGGC GGAGGAACTC TTTGATCCGG TTCCTGAACA 3500
GGATCTATTT GAGGCGCTAA ATGAAACCTT AACGCTATGG AACTCGCCGC CCGACTGGGC TGGCGATGAG CGAAATGTAG TGCTTACGTT GTCCCGCATT 3600
TGGTACAGCG CAGTAACCGG CAAAATCGCG CCGAAGGATG TCGCTGCCGA CTGGGCAATG GAGCGCCTGC CGGCCCAGTA TCAGCCCGTC ATACTTGAAG 3700
CTAGGCAGGC TTATCTTGGA CAAGAAGAAG ATCGCTTGGC CTCGCGCGCA GATCAGTTGG AAGAATTTGT TCACTACGTG AAAGGCGAGA TCACCAAGGT 3800
AGTCGGCAAA TAATGTCTAA CAATTCGTTC AAGCCGACGC CGCTTCGCGG CGCGGCTTAC CTTGGCCGTT AGGCCGCATG GACACAACGC AGGTCACATT 3900
GATACACAAA ATTCTAGCTG CGGCAGATGA GCGAAATCTG CCGCTCTGGA TCGGTGGGGG CTGGGCGATC GATGCACGGC TAGGGCGTGT AACACGCAAG 4000
CACGATGATA TTGATCTGAC GTTTCCCGGC GAGAGGCGCG GCGAGCTCGA GGCAATAGTT GAAATGCTCG GCGGGCGCGT CATGGAGGAG TTGGACTATG 4100
GATTCTTAGC GGAGATCGGG GATGAGTTAC TTGACTGCGA ACCTGCTTGG TGGGCAGACG AAGCGTATGA AATCGCGGAG GCTCCGCAGG GCTCGTGCCC 4200
AGAGGCGGCT GAGGGCGTCA TCGCCGGGCG GCCAGTCCGT TGTAACAGCT GGGAGGCGAT CATCTGGGAT TACTTTTACT ATGCCGATGA AGTACCACCA 4300
GTGGACTGGC CTACAAAGCA CATAGAGTCC TACAGGCTCG CATGCACCTC ACTCGGGGCG GAAAAGGTTG AGGTCTTGCG TGCCGCTTTC AGGTCGCGAT 4400
ATGCGGCCTA ACAATTCGTC CAAGCCGACG CCGCTTCGCG GCGCGGCTTA ACTCAGGTGT TAAACATCAT GAGGGAAGCG GTGATCGCCG AAGTATCGAC 4500
TCAACTATCA GAGGTAGTTG GCGTCATCGA GCGCCATCTC GAACCGACGT TGCTGGCCGT ACATTTGTAC GGCTCCGCAG TGGATGGCGG CCTGAAGCCA 4600
CACAGTGATA TTGATTTGCT GGTTACGGTG ACCGTAAGGC TTGATGAAAC AACGCGGCGA GCTTTGATCA ACGACCTTTT GGAAACTTCG GCTTCCCCTG 4700
GAGAGAGCGA GATTCTCCGC GCTGTAGAAG TCACCATTGT TGTGCACGAC GACATCATTC CGTGGCGTTA TCCAGCTAAG CGCGAACTGC AATTTGGAGA 4800
ATGGCAGCGC AATGACATTC TTGCAGGTAT CTTCGAGCCA GCCACGATCG ACATTGATCT GGCTATCTTG CTGACAAAAG CAAGAGAACA TAGCGTTGCC 4900
TTGGTAGGTC CAGCGGCGGA GGAACTCTTT GATCCGGTTC CTGAACAGGA TCTATTTGAG GCGCTAAATG AAACCTTAAC GCTATGGAAC TCGCCGCCCG 5000
ACTGGGCTGG CGATGAGCGA AATGTAGTGC TTACGTTGTC CCGCATTTGG TACAGCGCAG TAACCGGCAA AATCGCGCCG AAGGATGTCG CTGCCGACTG 5100
GGCAATGGAG CGCCTGCCGG CCCAGTATCA GCCCGTCATA CTTGAAGCTA GGCAGGCTTA TCTTGGACAA GAAGAAGATC GCTTGGCCTC GCGCGCAGAT 5200
CAGTTGGAAG AATTTGTTCA CTACGTGAAA GGCGAGATCA CCAAGGTAGT CGGCAAATAA TGTCTAACAA TTCGTTCAAG CCGACGCCGC TTCGCGGCGC 5300
GGCTTACCTT GGCCGTTAGA TGCACTAAGC ACATAATTGC TCACAGCCAA ACTATCAGGT CAAGTCTGCT TTTATTATTT TTAAGCGTGC ATAATAAGCC 5400
CTACACAAAT TGGGAGATAT ATCATGAAAG GCTGGCTTTT TCTTGTTATC GCAATAGTTG GCGAAGTAAT CGCAACATCC GCATTAAAAT CTAGCGAGGG 5500
CTTTACTAAG CTTGCCCCTT CCGCCGTTGT CATAATCGGT TATGGCATCG CATTTTATTT TCTTTCTCTG GTTCTGAAAT CCATCCCTGT CGGTGTTGCT 5600
TATGCAGTCT GGTCGGGACT CGGCGTCGTC ATAATTACAG CCATTGCCTG GTTGCTTCAT GGGCAAAAGC TTGATGCGTG GGGCTTTGTA GGTATGGGGC 5700
TCATAATTGC TGCCTTTTTG CTCGCCCGAT CCCCATCGTG GAAGTCGCTG CGGAGGCCGA CGCCATGGTG ACGGTGTTCG GCATTCTGAA TCTCACCGAG 5800
GACTCCTTCT TCGATGAGAG CCGGCGGCTA GACCCCGCCG GCGCTGTCAC CGCGGCGATC GAAATGCTGC GAGTCGGATC AGACGTCGTG GATGTCGGAC 5900
CGGCCGCCAG CCATCCGGAC GCGAGGCCTG TATCGCCGGC CGATGAGATC AGACGTATTG CGCCGCTCTT AGACGCCCTG TCCGATCAGA TGCACCGTGT 6000
TTCAATCGAC AGCTTCCAAC CGGAAACCCA GCGCTATGCG CTCAAGCGCG GCGTGGGCTA CCTGAACGAT ATCCAAGGAT TTCCTGACCC TGCGCTCTAT 6100
CCCGATATTG CTGAGGCGGA CTGCAGGCTG GTGGTTATGC ACTCAGCGCA GCGGGATGGC ATCGCCACCC GCACCGGTCA CCTTCGACCC GAAGACGCGC 6200
TCGACGAGAT TGTGCGGTTC TTCGAGGCGC GGGTTTCCGC CTTGCGACGG AGCGGGGTCG CTGCCGACCG GCTCATCCTC GATCCGGGGA TGGGATTTTT 6300
CTTGAGCCCC GCACCGGAAA CATCGCTGCA CGTGCTGTCG AACCTTCAAA AGCTGAAGTC GGCGTTGGGG CTTCCGCTAT TGGTCTCGGT GTCGCGGAAA 6400
TCCTTCTTGG GCGCCACCGT TGGCCTTCCT GTAAAGGATC TGGGTCCAGC GAGCCTTGCG GCGGAACTTC ACGCGATCGG CAATGGCGCT GACTACGTCC 6500
GCACCCACGC GCCTGGAGAT CTGCGAAGCG CAATCACCTT CTCGGAAACC CTCGCGAAAT TTCGCAGTCG CGACGCCAGA GACCGAGGGT TAGATCATGC 6600
CTAGCATTCA CCTTCCGGCC GCCCGCTAGC GGACCCTGGT CAGGTTCCGC GAAGGTGGGC GCAGACATGC TGGGCTCGTC AGGATCAAAC TGCACTATGA 6700
GGCGGCGGTT CATACCGCGC CAGGGGAGCG AATGGACAGC GAGGAGCCTC CGAACGTTCG GGTCGCCTGC TCGGGTGATA TCGACGAGGT TGTGCGGCTG 6800
ATGCACGACG CTGCGGCGTG GATGTCCGCC AAGGGAACGC CCGCCTGGGA CGTCGCGCGG ATCGACCGGA CATTCGCGGA GACCTTCGTC CTGAGATCCG 6900
AGCTCCTAGT CGCGAGTTGC AGCGACGGCA TCGTCGGCTG TTGCACCTTG TCGGCCGAGG ATCCCGAGTT CTGGCCCGAC TGTCGTTTTC AGAAGACGGC 7000
TGCACTGAAC GTCAGAAGCC GACTGCACTA TAGCAGCGGA GGGGTTGGAT CCATCAGGCA ACGACGGGCT GCTGCCGGCC AGAAGCGGCC ATTGATTCTT 7100
ACGTTTGAAT TCACTACCAT TGTGCGCCGA TAACAACTCC GTGAGTCCGA TTTCCCTATG CTAAAGAGCA CCCTTCTGGC CTTTGGTCTC TTTATTGCGC 7200
TCTCAGCGCG TGCAGAGAAC CAGGCAATCG CCAAGCTTTT CCTGAGGGCA GGGGTCGATG GGACCATCGT CATCGAGTCT CTAACCACCG GACAGCGCTT 7300
GGTTCACAAC GATCCTCGTG CGCAACAACG ATACCCGGCA GCTTCCACGT TCAAGGTACT CAATACCTTG ATTGCTCTCG AAGAGGGCGC CATTTCAGGT 7400
GAGAACCAGA TCTTTCACTG GAACGGTACC CAGTATTCGA TTGCGAATTG GAACCAGGAC CAGACTCTAG ACAGTGCGTT TAAAGTGAGT TGTGTCTGGT 7500
GCTACCAGCA GATTGCCCTT CGAGTGGGGG CACTCAAGTA CCCAGCCTAT ATTCAACAGA CAAACTATGG TCATTTACTG GAACCCTTCA ATGGAACGGA 7600
GTTTTGGCTG GATGGCTCTT TGACGATCAG CGCGGAAGAA CAGGTTGCCT TTCTCCGACA GGTTGTTGAG CGAAAACTAC CGTTCAAGGC GAGCAGCTAT 7700
GATTCCCTGA AGAAAGTCAT GTTCGCCGAT GAGAATGCCC AGTATCGCCT TTATGCAAAA ACAGGTTGGG CGACCCGCAT GACTCCCTCG GTGGGTTGGT 7800
ATGTTGGCTA TGTTGAAGCA AAGGACGATG TTTGGCTGTT TGCCCTGAAT CTTGCTACCC GCGACGCGAA TGACCTGCCC CTACGAACGC AGATAGCCAA 7900
AGACGCGCTG AAGGCGATAG GTGCGTTTCC TACGAAGTAA CGTCGGCTCC TGGGAGACGC TCAGTGTCAG GTTTGGGTCG ACACCGGTAA TCGGATCGTT 8000
GCCGCACTGA ACAGCGCCCC GTTCCAGGTC GCCTCCATTT ATGCGGCTGA ACCGAGGGAG AGCAGCTTTA CGCCGTCTGG CCGCAGTTCG CCCTTGGGCG 8100
ACACGTGCCG GTAGAGCGTC TGCCGGGTAA TCCCGAGTTC CTTCGCAGAG ATCGCCCACC TTGGTTTCCG GTTGCCCCAT GCGGCACTGT TGCAAATAGT 8200
CGGTGGTGAT AAACTTATCA TCCCCTTTTG CTGATGGAGC TGCACATGAA CCCATTCAAA GGCCGGCATT TTCAGCGTGA CATCATTCTG TGGGCCGTAC 8300
GCTGGTACTG CAAATACGGC ATCAGTTACC GTGAGCTGCA GGAGATGCTG GCTGAACGCG GAGTGAATGT CGATCACTCC ACGATTTACC GCTGGGTTCA 8400
GCGTTATGCG CCTGAAATGG AAAAACGGCT GCGCTGGTAC TGGCGTAACC CTTCCGATCT TTGCCCGTGG CACATGGATG AAACCTACGT GAAGGTCAAT 8500
GGCCGCTGGG CGTATCTGTA CCGGGCCGTC GACAGCCGGG GCCGCACTGT CGATTTTTAT CTCTCCTCCC GTCGTAACAG CAAAGCTGCA TACCGGTTTC 8600
TGGGTAAAAT CCTCAACAAC GTGAAGAAGT GGCAGATCCC GCGATTCATC AACACGGATA AAGCGCCCGC CTATGGTCGC GCGCTTGCTC TGCTCAAACG 8700
CGAAGGCCGG TGCCCGTCTG ACGTTGAACA CCGACAGATT AAGTACCGGA ACAACGTGAT TGAATGCGAT CATGGCAAAC TGAAACGGAT AATCGGCGCC 8800
ACGCTGGGAT TTAAATCCAT GAAGACGGCT TACGCCACCA TCAAAGGTAT TGAGGTGATG CGTGCACTAC GCAAAGGCCA GGCCTCAGCA TTTTATTATG 8900
GTGATCCCCT GGGCGAAATG CGCCTGGTAA GCAGAGTTTT TGAAATGTAA GGCCTTTGAA TAAGACAAAA GGCTGCCTCA TCGCTAACTT TGCAACAGTG 9000
CCAATTTATG AGTAAAGGAT TATGTCCACG ATAAGCACCT GGGTCGATTC CTGGGAGGCG GCCATGAGGG TAGGGAAGCG CCGTCCCGTC AAGTCAGCGT 9100
AATGCTCTGC CAGTGTTACA ACCAATTAAC CAATTCTGAT TAGAAAAACT CATCGAGCAT CAAATGAAAC TGCAATTTAT TCATATCAGG ATTATCAATA 9200
CCATATTTTT GAAAAAGCCG TTTCTGTAAT GAAGGAGAAA ACTCACCGAG GCAGTTCCAT AGGATGGCAA GATCCTGGTA TCGGTCTGCG ATTCCGACTC 9300
GTCCAACATC AATACAACCT ATTAATTTCC CCTCGTCAAA AATAAGGTTA TCAAGTGAGA AATCACCATG AGTGACGACT GAATCCGGTG AGAATGGCAA 9400
AAGCTTATGC ATTTCTTTCC AGACTTGTTC AACAGGCCAG CCATTACGCT CGTCATCAAA ATCACTCGCA TCAACCAAAC CGTTATTCAT TCGTGATTGC 9500
GCCTGAGCGA GACGAAATAC GCGATCGCTG TTAAAAGGAC AATTACAAAC AGGAATCGAA TGCAACCGGC GCAGGAACAC TGCCAGCGCA TCAACAATAT 9600
TTTCACCTGA ATCAGGATAT TCTTCTAATA CCTGGAATGC TGTTTTCCCG GGGATCGCAG TGGTGAGTAA CCATGCATCA TCAGGAGTAC GGATAAAATG 9700
CTTGATGGTC GGAAGAGGCA TAAATTCCGT CAGCCAGTTT AGTCTGACCA TCTCATCTGT AACATCATTG GCAACGCTAC CTTTGCCATG TTTCAGAAAC 9800
AACTCTGGCG CATCGGGCTT CCCATACAAT CGATAGATTG TCGCACCTGA TTGCCCGACA TTATCGCGAG CCCATTTATA CCCATATAAA TCAGCATCCA 9900
TGTTGGAATT TAATCGCGGC CTCGAGCAAG ACGTTTCCCG TTGAATATGG CTCATAACAC CCCTTGTATT ACTGTTTATG TAAGCAGACA GTTTTATTGT 10000
TCATGATGAT ATATTTTTAT CTTGTGCAAT GTAACATCAG AGGGCACTGT TGCAAATAGT CGGTGGTGAT AAACTTATCA TCCCCTTTTG CTGATGGAGC 10100
TGCACATGAA CCCATTCAAA GGCCGGCATT TTCAGCGTGA CATCATTCTG TGGGCCGTAC GCTGGTACTG CAAATACGGC ATCAGTTACC GTGAGCTGCA 10200
GGAGATGCTG GCTGAACGCG GAGTGAATGT CGATCACTCC ACGATTTACC GCTGGGTTCA GCGTTATGCG CCTGAAATGG AAAAACGGCT GCGCTGGTAC 10300
TGGCGTAACC CTTCCGATCT TTGCCCGTGG CACATGGATG AAACCTACGT GAAGGTCAAT GGCCGCTGGG CGTATCTGTA CCGGGCCGTC GACAGCCGGG 10400
GCCGCACTGT CGATTTTTAT CTCTCCTCCC GTCGTAACAG CAAAGCTGCA TACCGGTTTC TGGGTAAAAT CCTCAACAAC GTGAAGAAGT GGCAGATCCC 10500
GCGATTCATC AACACGGATA AAGCGCCCGC CTATGGTCGC GCGCTTGCTC TGCTCAAACG CGAAGGCCGG TGCCCGTCTG ACGTTGAACA CCGACAGATT 10600
AAGTACCGGA ACAACGTGAT TGAATGCGAT CATGGCAAAC TGAAACGGAT AATCGGCGCC ACGCTGGGAT TTAAATCCAT GAAGACGGCT TACGCCACCA 10700
TCAAAGGTAT TGAGGTGATG CGTGCACTAC GCAAAGGCCA GGCCTCAGCA TTTTATTATG GTGATCCCCT GGGCGAAATG CGCCTGGTAA GCAGAGTTTT 10800
TGAAATGTAA GGCCTTTGAA TAAGACAAAA GGCTGCCTCA TCGCTAACTT TGCAACAGTG CCACTGTTCG CTCGGAAATC AACTCACGCT CGAACTCGGC 10900
CAGCGCGGCA AAAATACCGA ACACAAGCTT GCCGGCGGCA GTCGTCGTGT CGACCGCCGC ACCGTGACCG GTCAGGACCT TCAGGCCCAC GCTACGCGCA 11000
GTTAGGTCGT GCACGGTGTT GATCAGGTGG CGCAGATCAC GGCCAAGCCG ATCGAGCTTC CACACGATCA GCGTGTCCCC TTCACGAAGC GCCTTCAGGC 11100
AAGCAGCCAA CCCTGGGCGA TCATCGCGCC TGCCCGAGGC CAGATCCTCG TAAAGGTGCG CAAGGCTCAC ACCAGCGGCG ATGAGCGCAT CGCGTTGCAA 11200
ATTGGTGGAC TGGGATCCGT CCGCCTTCGA TACCCGCATG TAGCCGATCA GCACCTTTTC ACCCGTCACG TATACGTTCG ATTATGTGAC AGTATGGAAT 11300
GGAAAGCTCT CGCCGTCAAA ATTTGTCACT TAACCCGTCA TTTAGTCTAC GGCATGTAAA GGGGCCGTCT GGCTCATAAT GTGACAGAAA TTCAGGGGGA 11400
ATGCCCTCCT TGGTAAAGGT GACGCGCAAA CGCTCCAGGG ATTCAGGGTC ACGCTGTCCA AAGGATGCCA TCGCGAATAA CGAGCGGGCT ATCTCGGAGT 11500
CGTGCCGCGC TTCGATAATG GCATCGTTGA TTGCTTTGAG GGCTTGTTGC CAATAGTTGA CGGGTTCCTT CTTCCGCTCA ACCGCTGGCA GGCCGTTGGT 11600
GAACTCAGTT TGTGGCTCTG ACCGGAACAG CGTTGCCAGT TCTCCGCGTG GACTCAACAC CTTCGATTCG ATCAGGTCGA TGGCGGTTGC CGCTGCCTCC 11700
AATATCTGCA ACTGCACCGA TGAGTCCAGA ATCTCGTAGG GATGCCACAG ACTTTGCCCG GCGCGCAGCG GATGGCCGCA GCGCTCCCAG ACATAGCGGA 11800
TACTGCCAGC GCAAGTCCCG CAATGCGAGA GCGGGGTATT CAGCTCATCC AGCAGTGTAC GCAGCAGCCG GAACCACAAA CCGGCATGGA CGGGCCGGCG 11900
CGGCAACTCG ACGTATCCTG CTGTCAGTGC TTGCCAGGTG CGCCGGTCCA TCGTCGCAAT CGCGTCACTG GCCATGCGCG GGGCAGCGTC GGCCTTCTCC 12000
CAGCCAAGCA CACGCCCTGG CAGGCCCCAA TACGATTCCA GCCAGCATCC ATGCAGGGGA CAGCTCAGCA TCAGGGGTAG CTTCCACGCG AGCAGTACCG 12100
CCTGGTTCGC TGAATCATTC AGGCAGAGTG GGCAGGCCCG ACGGATTGGC TGACTGGGCA GCCACGCGCG CCAGCTCGTG ACCGATCTCG TCTTGCGGTT 12200
GCGTTTTGGC AGCATTACCG AGAACTGGAA CGCATAGATT TCCAGGGCGG ACGGAACCCG GTCATCGAGG CTATCCAGCA GCCATGGCAC CCAGCCGGCA 12300
AAACTCATGC AGCGCAGTTG GTCCAGCTCG ATGCCGCTTC GCCGGGAGAG TGCCGTCAGC AGCGACAGCG GCGGTGCGGT GTCCAGGTCA TCGACCTTGT 12400
CATGCCCAAG ATCGTGTTCC AACAAGTCAA GCATATCCAT CTGGTAGCAG ACGGCGACAC GATTGAGCCA CGAGGATAAG GCTTCGCCTT CCTTGGGAGC 12500
CGGATGCAGC GGCCAGCGTG GAGCTGGCTT CACATCAGTT CCCGCTCGAA CTGCCGACGC CGCTCGCTGG GACCGGTGTA ATCGGCCATG CTGAGCGTGC 12600
GGTGGTTGAT CGCTTCCTCA CCGCTCTCCA CAGGCGGCGA TGGCCGCCGC CATCAGCAAG TGCGCCAGTT CACCGATGGT GCCCTCGCTG CGCGTGAGCA 12700
GGTAGCGGGC CATGTCCAGC GTGGCAATCG ACGAGGGTCG CCGCAGTGGA AGCGAAGCGG CGAAGCTGGC GAGCAGTGAG CAGCAATCGT CGTTGGCCTC 12800
CCACACCGGC AGCATCATCG GCTCGAACCG ATTTTCCAAC TGGTCATCCG AACGGATGGC CAGGTAGGCG TCGCGCGTGC CGACGCCTAC CAGCGGGATG 12900
CGTAGTTCGT TGCCGAGGAA GCGCAGCAGG TTAAGGAATT CACGGCGGTT GACGCTGTTG CCGGCCAGGA CATTGTGCAG CTCGTCGATC ACCAGCATGC 13000
GCACGCCGAC CTTGCGCAGC AGCGCCAGTG CCAGTTGCTC CATTTCCGGT AGCCGTGGAC GCGGGCGCAA TGGCGCGCCC ATCGCGGCGA GCAGCGCGAC 13100
GTAGAACCGG ATTACTGACG GTTCGGATGG CATCTGAACG ACCAGTACCG GGATGTGCTC CTGGTCGGCG TCGGCGCTGG CCGGATGCGT GCGCCGGAAC 13200
TTCTCGACGA TCATCGACTT GCCGTTGTTG GTTGGGCCAA CCAGCAGCAG GTTGGGCATG CGCTGCTTGT TGGGCCACGC ATACAGGGTT TCCAGCCGGT 13300
TTAACGCTTC GACCGCGCGC GGATAGCCGA TCCAGCGGTC GGCGCGAAGG CGCTGGATGC GCTCGTCCGC CGGCAGCCGG GCCAGCCCCT GCGCCGTCGG 13400
CAGCAGGTGG GATAGATCGA TGATCGGATA TTCGTCCACG GCTACCACTC CTCAATCTGG TCGAACGGCT TGGCCGGTGG CAGGTTGTCC GCCTGCGGAT 13500
CAGCAACGTC CGTTTCTGGC GGAGTCGGCT TGTCCGGCGG AACCGACGCT TTGAGGTGCT GCCGTCGATC CGCATCACGC CGCGCCTTGC GCGTGGCTTT 13600
CTGCGCGGTG GTCACGATCT CGCGCATCTG CCCGATCATG CGGAACAGTG CTGATTCATC CACTTGTTCG CGCCCCTGTT GCCGCAATTT CGTCAGCGCC 13700
TGCCGTTGTT CCCACAGAGT GACAGCCGGG TGCGACAAGG TACGGTAGGG GATTTCCAGA TAGTGCTGAC CTTCCGGTTC CAGTACCCAG ATGCGGCTAA 13800
TGTCGCGCGG ATCGCGCCGG ATCAGGAAGG CAGGCCAGCG GTCGCGCCGC GCAATCCACG GCTTGAGCGT ATCGGCGTAA TAGTGGATGT GGTCGATGAC 13900
GAATCCGGTG CGGGTTAGTG TGCGGCGGAT GATGGGCAGG AAATCGACCA GGAATGCCGT GGCGCGGGTG ACGACGGCCG GGACGCCGAC ACGCGTCACG 14000
GCCTCAGACC AGCGCGCCAC CGGCGGCTGA AGCAGGCCGT TGTGCACCGA GCCGTGATAG GTGCCCACTG CCAATGTAAG CCAGCGCTCC AGCTCATGCA 14100
GGGTCAGGGC GGCCTTGTTT TCGGAATCGT AATCCCCGCG CTGGTCAGGG TTGGAGAAGG TCGTCCCCGG CAATTCATCG TGGATCATCT GCATCGCCGT 14200
GCCGATGATC CTTTCCACGA TGCCGCCGTA ATGGGGCTGC CCGGGCGGAC GATAGTCCAA TTGGATGCCA TGCTGCTCGC AGCCACGGCG CAGGGCCTCG 14300
CTTTTGAACT CGGCTGCGTT GTCCAGGTAG AGCAGCTTGG GCTTGCCGCT CATTGGCCAG TCCATCTCGA CATTCAGCCC CTCCAGCCAG GGACGCTTGT 14400
CGCAGGCAAC ATGCACAAGG CACAGGCCGA CCGAAACGGC GGACGGTGCT TCCAGCGTGA CGACCATGCC GAGCACGCAG CGGGTGAACA CGTCGATGGC 14500
GACGGTCAGA TACGGGCGGC CAATTGGTTG CCGGTCGCGC TCGTCCACCA CGATCAGGTC GATGACCGTG TGGTCGATCT GTATCTGTTC CAGCGGCAAG 14600
GTGACTGCCG GCGGGACGCC GCCGACACCT TGCAGGTCGC GGGAGGCATC TTGTCCTTCC CGGCGGCGAG CGGTTTTGAG TGGATCGAGG GCAGCGATCC 14700
GCAGCGCCAC GGTGTTGCGC GCCGGCACCC GCAGTTTGTG CGTTTTGCAT ACCAGCGCAA CTTCGCGGTG AAACGCCGCC AGGCTGCGTT TCTGCTTGGT 14800
CAGGAAGCGC TTTTGCAGCA GCTCGCGGAT GATGCGCTCA ACAGACTCCG GCAAACGGCC CCTGCCTTTG CCGCCACCGG ATTGACCGGG TGCGAGGTCT 14900
GTCACAAGGC CGCTGCCCTG CCTGGCGCGG CGGATCAGGA CATACACCTG CCGCCGGGAC AGGCCAAGCG CCTGCGCTGC GGCATCGGCA GCCTGATGAC 15000
CGACTACTTC AAGCATCGCC AGCGGCGCGA TGATCTCGGC CCTGCGGCGG GCATGCTCCC ATGCCTCGTC GGACAGTGTA GCCACCCCGT GCTCGGTGAT 15100
TCGTGCGTCT GACGCCATGC CCATACCTCG CTTTTGGTGC ACACGAGTAT TGAGCATAGT CGAGATTGGT GAAGATGACT CCTGATATTG GGCTATCAGG 15200
AGCTGACTGC ACTCCGGGCG TTACGTCCAG TTAATTGGTG CAGTCGTCTT CTGAAAACGA CAGAGCCATT CCTCGATAGA GTTCGGCAAA ACCTTCGTTT 15300
TGTCGAACCA TTGCATCGCC CTTTGTGATT GGCGTATAAA CACACAAACA CCTATTAGCG GAGAACGCTA TGAATACCAT TCGCTGGAAT GTCGCCGTCT 15400
CGGCCGACAC CGACCAGTCG CTTCGGATGT TTCTGGCCAG CCAGGGCGGC GGCCGTAAGG GCGACCTGTC GCGCTTCATC GAAGAAGCGG TACGGGCACA 15500
CATCCTGGAG CTGAGCGCTG AGCAGGCCAA GGCCGCTAAC GCCCATCTGA GTGAGGCAGA ATTGACCAAC GCGGTTGACG AAGCGCTCGA CTGGGCACGT 15600
AAGCGCTGAT GCGGGTCGTG TTGGATACCA ACATCCTGTT CAGCGCCCTG ATCTCGCCAC ATGGCGCGCC CGATGCGATC TACCGTGCCT GGCGGGCGGC 15700
GCGTTTCGAG GTGGTGACCT CGCGGATGCA ACTCGATGAA ATTCGTCGAG CCAGCCGCTA TCCCAAGCTT CAGGCCATCC TACAGCCCGC CAAGGTGGGC 15800
GCCATGATCA ATAACCTGCA ACGGGCTGTG GTACTGGAGC GCCTGACCAT CGAGGTCGAA GCCGATGATC CGGATGACTC GTTTTTGCTG GCCATGGCCT 15900
TGGCGGGCGA TGCGGACTAC CTGATAACCG GTGATCGCCG CGCCGGCCTG CTGCAACGCG GGCACATCGA ACGACGCGGA TCGTCACGCC CGCCGTGTTC 16000
TGCGTCGAGG TGCTGTGATC AATGCCGGTC GGTTTTCTGA CTCAAGAGCA ACGCGACGGT TTTGGCCGCT ATGTTGATTC GCCCAGCCGT GAAGAGCTGG 16100
AACGTTACTT CCACCTGAGC GATGAAGACC GTGAAGCCAT CCAGGTGCTG CGGGGTAACC ATAACCGTCT GGGTTATGCC GTTCTGCTGA CCACCGTCCG 16200
CTTCGTTGGC GTTCTGCCGG ACAAGCCCGC CGCCGTGCCG GTGGAAGTCC TGCAGGTGCT TTGCCGACAA CTGGCGATTC CAGACCCCGA CTGCCTCCAG 16300
CGCTATAGCG ATCATCGCCG CTGGATACAT GCCACCGATA TTCAGAACCG CTTTGGCTAT CGTCATTTCA CCGATCCGGG CATCGGCTTT CGCTTGAGCC 16400
GCTGGCTGTA TGCCCTCTGC TGGACGGGCA CCGACCGGCC GGGAGTGCTG TTTGAGCGAG CCACCTCGTG GCTGTTCACA CAGAAAGTCC TCCTGCCTGG 16500
TGTGTCTCAA CTAGAGCGCT TTATCGCCCA GTTGCGCAGT CGGGTCGAAG AACGCCTCTG GTTTACGCTG GGCCGCAGCG TGACTGAGGA ACAGCGATTG 16600
CAACTGCAAG ACTTGCTGAC GGTGGCCGAA GGCAACCGCA GCTCCCGGCT GGATCAATTG CGCTCCGGCC CGGTCATGGT CAGTGGCCCC GCGTTGATTC 16700
GGGCACTGCG CCGGCTCGAT GACGTGCGCG GCATCGGCAT CACCTTGCCG GCGGCGGCGC ACATCCCTCC CAGCCGTATC GCCGCCCTGG CCCGCTTCGC 16800
CAACACGGCC AAGGTCACCG CGATTAATCG GCTGCCGGCG TCGCGGCGGA TGGCGACACT GGTGGCCTTC GCACTCTGCC TGGAGGCGAC TGCGCACGAC 16900
GACGCACTGG AAGTCCTGGA GGCCTTGCTG CGCGACCTGT TCAGCAACGC GGAGAAGGCC GACAAGAAAG CCCGCATGCG CAGCCTGAAA GACCTGGATC 17000
GGTCGGCCGC GACGCTCGCC GCCGCGTGCA AGGTCGTGCT GGACAGCTCG ATCAGCGATG ACAACGTGCG CGCCCGGCTG TTCAACGACC TGCCGAGGAC 17100
CACCCTGGAA AAGGCCCTGG AAGAGGTCAA CGCGCTGATC CGCCCGGTAG ATGACGTCTA TTTTCTTGCA TTGGAAGCGC GCTACCGCAG CGTGCGCCGC 17200
TTCCTGCCCG ACCTGCTCAA GCACATCCGC TTCGGCTTCA GCCCGGCCGG CAAGGGCGTG GCGGCTAGTC TGGAGTGGCT GCAACTGAAC CTGCCGCGCC 17300
GGAAGCCAGA GGATGACGCG CCGCAGGAGA TCGTGGCCAA GGCTTGGCAG AAGCACATCA CCCGCGAAGA TGGCTCCCTC GACATGGGTG CCTATGTGTT 17400
CTGCACGCTC GATGCGCTGC GCACGGCCCT GCGCCGCCGC GATGTCTTCG TCTCGCCCAG TTGGCGCTAT GCCGACCCGC GTCTTGGCCT GCTCGACGGT 17500
GCCGAATGGC TGGCGGCGCG ACCGATCATC TGCCGGTCAC TGGGCCTGAC CATCGACGCC AAAACCACCC TGGACGCCTT GTCCGTCGAG CTGGATGCAA 17600
CCTGGCTGGC AGTAGCCGCG CGCCTGCCCG ACAACCCGGC GATTCAACTG AGCGAGAACA CCGAGGGCAA GACCGAACTG TCGCTCGGGG CGCTGGACAA 17700
GCTGGACGAG CCCTGCTCGT TGCTGCAACT GCGGGCGGCC GTGTCTGACC TGATGCCGCG TGTCGATCTG CCGGAAATCC TCTTGGAAAT CGCCGCCCGC 17800
ACTGGCTTTT CCGAGGCCTT CACCCATGTC TCCGAACGCA ATGCACGCGC CGACAACCTG GTCACCAGCC TCTGCGCGGT GCTGTTGGGC GGGGCCTGCA 17900
ACACCGGCCT GGAGCCCTTG ATCCGCACCG ACAACCCGGC GCTGCGCCGT GACCGGCTGT CCTGGGTCAG CCAGAATTAT ATCCGCGACG ACACCCTGTC 18000
AGCGGCTAAC GCCATCCTGG TCGGAGCGCA AAGCCAACTG GAACTGGCCC AAGTCTGGGG TGGCGGCGAG GTCGCCTCCG CCGATGGCAT GCGCTTCGTC 18100
GTACCGGTGC GCACCGTGCA TGCCGGCCCC AATCCGAAGT ATTTCGGCAC CGGCCGGGGT GTCACCTGGT ACAACCTGAT TTCCGACCAA TTCTCCGGCC 18200
TCAACGCCAT CACCGTGCCC GGCACGCTGC GCGACAGCCT GGTGTTGCTG GCGGTCGTGC TGGAACAGCA GACCGAGTTG CAGCCGACGC AAATCATGAC 18300
CGACACCGGG GCCTACAGCG ATGTGGTGTT CGGGCTCTTC CGCCTACTTG GCTACCACTT CAGTCCGCGG CTGGCCGATG TCGGCGGTAC CCGCTTCTGG 18400
CGCACGCGCC CGGACGCGGA CTACGGCAAG CTCAACGGGC TGGCCCGCCA GTCGGTCAAA CTCGACCTGA TCGCCGAGCA CTGGGACGAC CTGCTGCGCC 18500
TGGCCGGCTC GCTCAAACTC GGCCGGGTGC CGGCGACTGG CATCATGCGC ACGCTGCAAA CGGGAGATAG ACCCACCCGG CTGGCCCAGG CGCTGGCCGA 18600
ATTCGGGCGG ATCGAAAAGA CTCTGCACAC GTTGACCTAT ATCGACGACG AGTCCAAGCG CCGCGCCACC CTGACCCAGT TGAACCGAGG CGAAGGCCGG 18700
CACAGCCTGG CCCGCGCCGT GTTCCACGGC AAACGCGGCG AGCTCCGCCA GCGCTACCGC GAAGGCCAGG AAGACCAGCT CGGTGCTCTG GGCCTGGTGG 18800
TGAACATCAT CGTGCTGTGG AACACCCTCT ACATGACGGC GGCCGTGGAA CGGCTCAAGC AGCACGGCTA TCCAGTGCTG GAAGAGGATT TGGCCCGGCT 18900
ATCGCCGCTG ATCTACGAGC ACATCAACAT GCTCGGGCGG TATTCCTTTG CGGTACCGGA AGAAGTTGCG CGCGGCGAGC TGCGGCCACT GCGTAATCCA 19000
GACGACGACC TGTGATCCCC CTAAACGCTA TGAGCAACAC CCAAGCTGCT GCTGGATCGG CGGGCACTTC ACCGAGCCGA ACGAACAGAA AACGCAGCAA 19100
TCCCCTGGGT TGGGGCGCAG CAGCGCCTTG CAGTTGCTGC ACTCGTAATA GAACTGGCAG GCGTCCGTGG GCATGGTTTC CGGCTTGGCG AAGCCGCAGC 19200
GCGGGCAAGT CAGCACGGAC TCAAGGACAA TGGCGCTCAT CGTGACCTCA CTTCTGCACT GTGGAGGGGT ATCCCGCGTT CGCGGTCGCC TCAGTCAGTG 19300
CCTCGGGCTG GGCCTTATCG GGATCGTAGG TGACGGTCGC CGTCTTCTGG TCGAAATTGA CCTGGACGTC ACTCACGCCG GACACCTTCT CCAGCGACTT 19400
CTTGACCGTG ATCGGACAGA GTCCGCACGT CATGTTCTGC ACGTCGAGCG TGACGGTTTT CGGGGGAGCC GCCAGCGCCA CGAAGGGCAA GGCGAAAAGC 19500
ACGGCGATCA GCAGTTTGCG CATGGTTAAT CTCCTTCAGT AGAACAGCGG GGCGAGCCAC GGCACGGCCA ATAGGCCGAG CAGCAGCACG CTGACGATCC 19600
AGAACACGAG TCGCTGTCGC ACGAGCGTGC GCGGATCGGC GCAGGGTGTA CCTGGCGTAC AAACCTGTGG CACCAGGTAG AGCTTGCGGA ATGCCAATCC 19700
CAGGAACAGT AGAGTCAACC CGATGAAGAG GGGGCGTAGT GGCTCCATCA TGGTCAGAGC GCCCACCCAC GTACCGCCGA CACCGAGTGC CAACAGCACC 19800
AGTGGCCCGA CACAGCACAC CGACGCACCG ATGGCGGTCA GCGAACTCGC GACCAGCGAG CCTTTCCCGG TGAGTTGCAT CCCCATTCCC ATCTCCTGAG 19900
CCTGATTGCC TAGGTGCTAT TCTAAACTCC GTACCAAAGT ACGGAATCAA GGAGAAAGTG ATGGCCACAG AGCTGACCAC TGGCAAGCTG GCAGACGCCG 20000
CCGGGGTGAA CGTCGAGACG ATCCGCTACT ACCAGCGACG CGGGCTGCTG GATGAACCAG CCAAACCCTT GGGTGGCCAT CGGCGCTATC CGGTGGACAT 20100
GGTGAAGCGA CTGCGTTTCA TCAAGCGGGC TCAGGCGCTG GGTTTCACGC TCTCGGAAGT CGGTGGACTG CTGACGCTGG ATGAGTCGTG CGCCTGTGCC 20200
GAAACGCGAG CACGGGCTGC ACGCAAGCTC GCGTTGATCG AGCAGAAGAT GGCCGACTTG GTCGTCATGC AGCAACTGTT AGGCGAACTG GTGCAGCAAT 20300
GTGATGCGGG AGACGGCGGA ACGATCTGCC CGATCATCGA GGCACTGATC AGAGAGTAAT GCCTGGCGGG TGAGCTGGAG ATCGGAAAGC CCCTTTACGG 20400
TGGGATTCAG AGCTTACGTT GGTTTTTGGT TCCATTGCTC CCCAAACCCC
|
|
|
|
| Recombination Sites |
|
|
| Name |
Coordinates |
Gene |
Sequence |
| res_site_III |
985-1026 |
42 |
ACTCGACTAC GTTAGTAATA GTTGAACTTT GATTAAGCGT AC |
| res_site_II |
1029-1059 |
31 |
GTTATTTGAA CCGTAGCGCG GGGAGCTTAA C |
| attI |
2366-2421 |
56 |
TGATGTTATG GAGCAGCAAC GATGTTACGC AGCAGGGCAG TCGCCCTAAA ACAAAG |
| attC Sat-2 core |
2959-3018 |
60 |
GCCTAACAAT TCGTCCAAGC CGACGCCGCT TCGCGGCGCG GCTTAACTCA GGTGTTAAAC
|
| attC ANT(3'')-IIa core |
3815-3868 |
54 |
GTCTAACAAT TCGTTCAAGC CGACGCCGCT TCGCGGCGCG GCTTACCTTG GCCG |
| attC Sat-2 core |
4406-4465 |
60 |
GCCTAACAAT TCGTCCAAGC CGACGCCGCT TCGCGGCGCG GCTTAACTCA GGTGTTAAAC
|
| attC ANT(3'')-IIa core |
5262-5315 |
54 |
GTCTAACAAT TCGTTCAAGC CGACGCCGCT TCGCGGCGCG GCTTACCTTG GCCG |
| attC qacH_sul1 core |
6599-6632 |
34 |
GCCTAGCATT CACCTTCCGG CCGCCCGCTA GCGG |
| r1 |
11263-11276 |
14 |
CCGTCACGTA TACG |
| r2 |
11279-11292 |
14 |
CGATTATGTG ACAG |
| r3 |
11323-11336 |
14 |
TTGTCACTTA ACCC |
| r5 |
11379-11392 |
14 |
ATGTGACAGA AATT |
| res_site_I |
15281-15308 |
28 |
GTTCGGCAAA ACCTTCGTTT TGTCGAAC |
|
| ORFs |
|
|
| Gene Name |
Associated TE |
Coordinates |
Class |
Sub Class |
Orientation |
| tnpR |
Tn1412 |
41-970 |
Accessory Gene |
Resolvase |
- |
| intI1 |
In32 |
1272-2285 |
Integron Integrase |
Class 1 |
- |
| ANT(2'')-Ia (ARO:3000230) |
In32 |
2431-2964 |
Passenger Gene |
Antibiotic Resistance |
+ |
| aadA (ARO:3002601) |
In32 |
3022-3813 |
Passenger Gene |
Antibiotic Resistance |
+ |
| ANT(2'')-Ia (ARO:3000230) |
In32 |
3878-4411 |
Passenger Gene |
Antibiotic Resistance |
+ |
| aadA (ARO:3002601) |
In32 |
4469-5260 |
Passenger Gene |
Antibiotic Resistance |
+ |
| qacEdelta1 (ARO:3005010) |
In32 |
5424-5771 |
Passenger Gene |
Antibiotic Resistance |
+ |
| sul1 (ARO:3000410) |
In32 |
5765-6604 |
Passenger Gene |
Antibiotic Resistance |
+ |
| bla LCR-1 (ARO:3002997) |
In32 |
7158-7940 |
Passenger Gene |
Antibiotic Resistance |
+ |
| tnpA |
IS26 |
8246-8950 |
Transposase |
|
+ |
| APH(3')-Ia (ARO:3002641) |
Tn4352 |
9140-9955 |
Passenger Gene |
Antibiotic Resistance |
- |
| tnpA |
IS26 |
10106-10810 |
Transposase |
|
+ |
| tniQ |
In32 |
11316-12621 |
Accessory Gene |
Target Site Selection |
- |
| tniB |
In32 |
12618-13439 |
Accessory Gene |
|
- |
| tniA |
In32 |
13442-15157 |
Transposase |
|
- |
| RHH_6 |
Tn1412 |
15370-15609 |
Passenger Gene |
Antitoxin |
+ |
| PIN_3 |
Tn1412 |
15609-16040 |
Passenger Gene |
Toxin |
+ |
| tnpA |
Tn1412 |
16022-19015 |
Transposase |
|
+ |
| merP |
Tn1412 |
19248-19523 |
Passenger Gene |
Heavy Metal Resistance |
- |
| merT |
Tn1412 |
19536-19892 |
Passenger Gene |
Heavy Metal Resistance |
- |
| merR |
Tn1412 |
19961-20359 |
Passenger Gene |
Heavy Metal Resistance |
+ |
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| tnpR |
TnpR |
Tn1412 |
930 |
41-970 |
- |
| Class: | Accessory Gene |
| Sub Class: | Resolvase |
| Transpoase Chemistry: | Serine |
| Sequence Family: | Serine Site-Specific Recombinase |
Protein Sequence:
|
MKIGYARVST RDQKADLQVD ALKQAGCERI YQDIASGAKS ARPELDKLLA NVRPGDAVVI WKLDRLGRSL KHLVELVGEL AERKVGLQSL NDPIDTTHAQ
GRLVFNLFAS LAEFERELIR ERTQAGLSAA RARGRIGGRP KGLPAKAEAT AMAAETLYRE GRLSVSAIGE KLHISKSTLY SYLRHRGVEI GAYQKSARSR
DQHASAASPA EPPAAERVAT VTLRLAVVNN SKFVRGRKRA TENIERYCLE PYGMKRLDAG HYELTIPYRS DDELDKSVHD LLTEISQEAD MRNCFVEMGA
WEEDTEKRW
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| intI1 |
IntI1 |
In32 |
1014 |
1272-2285 |
- |
| Class: | Integron Integrase |
| Sub Class: | Class 1 |
| Transpoase Chemistry: | Tyrosine |
| Sequence Family: | Class 1 Integron Tyrosine Integrase |
Protein Sequence:
|
MKTATAPLPP LRSVKVLDQL RERIRYLHYS LRTEQAYVHW VRAFIRFHGV RHPATLGSSE VEAFLSWLAN ERKVSVSTHR QALAALLFFY GKVLCTDLPW
LQEIGRPRPS RRLPVVLTPD EVVRILGFLE GEHRLFAQLL YGTGMRISEG LQLRVKDLDF DHGTIIVREG KGSKDRALML PESLAPSLRE QLSRARAWWL
KDQAEGRSGV ALPDALERKY PRAGHSWPWF WVFAQHTHST DPRSGVVRRH HMYDQTFQRA FKRAVEQAGI TKPATPHTLR HSFATALLRS GYDIRTVQDL
LGHSDVSTTM IYTHVLKVGG AGVRSPLDAL PPLTSER
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| ANT(2'')-Ia (ARO:3000230) |
ANT(2'')-Ia |
In32 |
534 |
2431-2964 |
+ |
| Class: | Passenger Gene |
| Sub Class: | Antibiotic Resistance |
| Function: | antibiotic inactivation (ARO:0001004) |
| Target: | aminoglycoside antibiotic (ARO:0000016) |
| Sequence Family: | ANT(2'') (ARO:3004276) |
| Comment: | perfect match to reference sequence for ARO:3000230||Synonym |
Protein Sequence:
|
MDTTQVTLIH KILAAADERN LPLWIGGGWA IDARLGRVTR KHDDIDLTFP GERRGELEAI VEMLGGRVME ELDYGFLAEI GDELLDCEPA WWADEAYEIA
EAPQGSCPEA AEGVIAGRPV RCNSWEAIIW DYFYYADEVP PVDWPTKHIE SYRLACTSLG AEKVEVLRAA FRSRYAA
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| aadA (ARO:3002601) |
AadA |
In32 |
792 |
3022-3813 |
+ |
| Class: | Passenger Gene |
| Sub Class: | Antibiotic Resistance |
| Function: | antibiotic inactivation (ARO:0001004) |
| Transpoase Chemistry: | aminoglycoside nucleotidyltransferase |
| Target: | aminoglycoside antibiotic (ARO:0000016) |
| Sequence Family: | ANT(3'') (ARO:3004275) |
| Comment: | perfect match to reference sequence for ARO:3002601||Synonyms: aadA1-pm, aadA, aadA1, aad(3'')(9) |
Protein Sequence:
|
MREAVIAEVS TQLSEVVGVI ERHLEPTLLA VHLYGSAVDG GLKPHSDIDL LVTVTVRLDE TTRRALINDL LETSASPGES EILRAVEVTI VVHDDIIPWR
YPAKRELQFG EWQRNDILAG IFEPATIDID LAILLTKARE HSVALVGPAA EELFDPVPEQ DLFEALNETL TLWNSPPDWA GDERNVVLTL SRIWYSAVTG
KIAPKDVAAD WAMERLPAQY QPVILEARQA YLGQEEDRLA SRADQLEEFV HYVKGEITKV VGK
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| ANT(2'')-Ia (ARO:3000230) |
ANT(2'')-Ia |
In32 |
534 |
3878-4411 |
+ |
| Class: | Passenger Gene |
| Sub Class: | Antibiotic Resistance |
| Function: | antibiotic inactivation (ARO:0001004) |
| Target: | aminoglycoside antibiotic (ARO:0000016) |
| Sequence Family: | ANT(2'') (ARO:3004276) |
| Comment: | perfect match to reference sequence for ARO:3000230||Synonym |
Protein Sequence:
|
MDTTQVTLIH KILAAADERN LPLWIGGGWA IDARLGRVTR KHDDIDLTFP GERRGELEAI VEMLGGRVME ELDYGFLAEI GDELLDCEPA WWADEAYEIA
EAPQGSCPEA AEGVIAGRPV RCNSWEAIIW DYFYYADEVP PVDWPTKHIE SYRLACTSLG AEKVEVLRAA FRSRYAA
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| aadA (ARO:3002601) |
AadA |
In32 |
792 |
4469-5260 |
+ |
| Class: | Passenger Gene |
| Sub Class: | Antibiotic Resistance |
| Function: | antibiotic inactivation (ARO:0001004) |
| Transpoase Chemistry: | aminoglycoside nucleotidyltransferase |
| Target: | aminoglycoside antibiotic (ARO:0000016) |
| Sequence Family: | ANT(3'') (ARO:3004275) |
| Comment: | perfect match to reference sequence for ARO:3002601||Synonyms: aadA1-pm, aadA, aadA1, aad(3'')(9) |
Protein Sequence:
|
MREAVIAEVS TQLSEVVGVI ERHLEPTLLA VHLYGSAVDG GLKPHSDIDL LVTVTVRLDE TTRRALINDL LETSASPGES EILRAVEVTI VVHDDIIPWR
YPAKRELQFG EWQRNDILAG IFEPATIDID LAILLTKARE HSVALVGPAA EELFDPVPEQ DLFEALNETL TLWNSPPDWA GDERNVVLTL SRIWYSAVTG
KIAPKDVAAD WAMERLPAQY QPVILEARQA YLGQEEDRLA SRADQLEEFV HYVKGEITKV VGK
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| qacEdelta1 (ARO:3005010) |
QacEdelta1 |
In32 |
348 |
5424-5771 |
+ |
| Class: | Passenger Gene |
| Sub Class: | Antibiotic Resistance |
| Function: | antibiotic efflux (ARO:0010000) |
| Target: | disinfecting agents and antiseptics (ARO:3005386) |
| Sequence Family: | major facilitator superfamily (MFS) antibiotic efflux pump (ARO:0010002) |
| Comment: | subunit of the qac multidrug efflux pump||perfect match to reference sequence for ARO:3005010 (bitscore:219) |
Protein Sequence:
|
MKGWLFLVIA IVGEVIATSA LKSSEGFTKL APSAVVIIGY GIAFYFLSLV LKSIPVGVAY AVWSGLGVVI ITAIAWLLHG QKLDAWGFVG MGLIIAAFLL
ARSPSWKSLR RPTPW
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| sul1 (ARO:3000410) |
Sul1 |
In32 |
840 |
5765-6604 |
+ |
| Class: | Passenger Gene |
| Sub Class: | Antibiotic Resistance |
| Function: | antibiotic target replacement (ARO:0001002) |
| Transpoase Chemistry: | dihydropteroate synthase |
| Target: | sulfonamide antibiotic (ARO:3000282)||sulfone antibiotic (ARO:3003401) |
| Sequence Family: | sulfonamide resistant sul (ARO:3004238) |
| Comment: | perfect match to reference sequence for ARO:3000410 |
Protein Sequence:
|
MVTVFGILNL TEDSFFDESR RLDPAGAVTA AIEMLRVGSD VVDVGPAASH PDARPVSPAD EIRRIAPLLD ALSDQMHRVS IDSFQPETQR YALKRGVGYL
NDIQGFPDPA LYPDIAEADC RLVVMHSAQR DGIATRTGHL RPEDALDEIV RFFEARVSAL RRSGVAADRL ILDPGMGFFL SPAPETSLHV LSNLQKLKSA
LGLPLLVSVS RKSFLGATVG LPVKDLGPAS LAAELHAIGN GADYVRTHAP GDLRSAITFS ETLAKFRSRD ARDRGLDHA
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| bla LCR-1 (ARO:3002997) |
Bla LCR-1 |
In32 |
783 |
7158-7940 |
+ |
| Class: | Passenger Gene |
| Sub Class: | Antibiotic Resistance |
| Function: | antibiotic inactivation (ARO:0001004) |
| Target: | penam (ARO:3000008)||cephalosporin (ARO:0000032) |
| Sequence Family: | LCR beta-lactamase (ARO:3002996) |
| Comment: | perfect match to reference sequence for ARO:3002996 |
Protein Sequence:
|
MLKSTLLAFG LFIALSARAE NQAIAKLFLR AGVDGTIVIE SLTTGQRLVH NDPRAQQRYP AASTFKVLNT LIALEEGAIS GENQIFHWNG TQYSIANWNQ
DQTLDSAFKV SCVWCYQQIA LRVGALKYPA YIQQTNYGHL LEPFNGTEFW LDGSLTISAE EQVAFLRQVV ERKLPFKASS YDSLKKVMFA DENAQYRLYA
KTGWATRMTP SVGWYVGYVE AKDDVWLFAL NLATRDANDL PLRTQIAKDA LKAIGAFPTK
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| tnpA |
TnpA |
IS26 |
705 |
8246-8950 |
+ |
| Class: | Transposase |
| Transpoase Chemistry: | DDE |
Protein Sequence:
|
MNPFKGRHFQ RDIILWAVRW YCKYGISYRE LQEMLAERGV NVDHSTIYRW VQRYAPEMEK RLRWYWRNPS DLCPWHMDET YVKVNGRWAY LYRAVDSRGR
TVDFYLSSRR NSKAAYRFLG KILNNVKKWQ IPRFINTDKA PAYGRALALL KREGRCPSDV EHRQIKYRNN VIECDHGKLK RIIGATLGFK SMKTAYATIK
GIEVMRALRK GQASAFYYGD PLGEMRLVSR VFEM
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| APH(3')-Ia (ARO:3002641) |
APH(3')-Ia |
Tn4352 |
816 |
9140-9955 |
- |
| Class: | Passenger Gene |
| Sub Class: | Antibiotic Resistance |
| Function: | antibiotic inactivation (ARO:0001004) |
| Target: | aminoglycoside antibiotic (ARO:0000016) |
| Sequence Family: | APH(3') (ARO:3000126) |
| Comment: | strict match to reference sequence for ARO:3002641 (bitscore: 560)||Synonyms: aphA-1, apha1-1AB, APH(3')-Ic, apha7 |
Protein Sequence:
|
MSHIQRETSC SRPRLNSNMD ADLYGYKWAR DNVGQSGATI YRLYGKPDAP ELFLKHGKGS VANDVTDEMV RLNWLTEFMP LPTIKHFIRT PDDAWLLTTA
IPGKTAFQVL EEYPDSGENI VDALAVFLRR LHSIPVCNCP FNSDRVFRLA QAQSRMNNGL VDASDFDDER NGWPVEQVWK EMHKLLPFSP DSVVTHGDFS
LDNLIFDEGK LIGCIDVGRV GIADRYQDLA ILWNCLGEFS PSLQKRLFQK YGIDNPDMNK LQFHLMLDEF F
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| tnpA |
TnpA |
IS26 |
705 |
10106-10810 |
+ |
| Class: | Transposase |
| Transpoase Chemistry: | DDE |
Protein Sequence:
|
MNPFKGRHFQ RDIILWAVRW YCKYGISYRE LQEMLAERGV NVDHSTIYRW VQRYAPEMEK RLRWYWRNPS DLCPWHMDET YVKVNGRWAY LYRAVDSRGR
TVDFYLSSRR NSKAAYRFLG KILNNVKKWQ IPRFINTDKA PAYGRALALL KREGRCPSDV EHRQIKYRNN VIECDHGKLK RIIGATLGFK SMKTAYATIK
GIEVMRALRK GQASAFYYGD PLGEMRLVSR VFEM
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| tniQ |
TniQ |
In32 |
1306 |
11316-12621 |
- |
| Class: | Accessory Gene |
| Sub Class: | Target Site Selection |
Protein Sequence:
|
VRKRSTTARS AWPITPVPAS GVGSSSGN*C EASSTLAAAS GSQGRRSLIL VAQSCRRLLP DGYA*LVGTR SWA*QGR*PG HRTAAVAADG TLPAKRHRAG
PTALHEFCRL GAMAAG*PR* PGSVRPGNLC VPVLGNAAKT QPQDEIGHEL ARVAAQSANP SGLPTLPE*F SEPGGTARVE ATPDAELSPA WMLAGIVLGP
ARACAWLGEG RRCPAHGQ*R DCDDGPAHLA STDSRIRRVA APARPCRFVV PAAAYTAG*A EYPALALRDL RWQYPLCLGA LRPSAARRAK SVASLRDSGL
IGAVADIGGS GNRHRPDRIE GVESTRRTGN AVPVRATN*V HQRPASG*AE EGTRQLLATS PQSNQRCHYR SAARLRDSPL VIRDGILWTA *P*IPGAFAR
HLYQGGHSP* ISVTL*ARRP LYMP*TK*RV K*QIL
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| tniB |
TniB |
In32 |
822 |
12618-13439 |
- |
| Class: | Accessory Gene |
| Transpoase Chemistry: | Serine |
| Comment: | homologous to TnsC protein of Tn7 putative ATP-binding protein |
Protein Sequence:
|
VDEYPIIDLS HLLPTAQGLA RLPADERIQR LRADRWIGYP RAVEALNRLE TLYAWPNKQR MPNLLLVGPT NNGKSMIVEK FRRTHPASAD ADQEHIPVLV
VQMPSEPSVI RFYVALLAAM GAPLRPRPRL PEMEQLALAL LRKVGVRMLV IDELHNVLAG NSVNRREFLN LLRFLGNELR IPLVGVGTRD AYLAIRSDDQ
LENRFEPMML PVWEANDDCC SLLASFAASL PLRRPSSIAT LDMARYLLTR SEGTIGELAH LLMAAAIAAC GER
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| tniA |
TniA |
In32 |
1716 |
13442-15157 |
- |
| Class: | Transposase |
| Function: | transposase |
| Transpoase Chemistry: | DDE |
Protein Sequence:
|
MLNTRVHQKR GMGMASDARI TEHGVATLSD EAWEHARRRA EIIAPLAMLE VVGHQAADAA AQALGLSRRQ VYVLIRRARQ GSGLVTDLAP GQSGGGKGRG
RLPESVERII RELLQKRFLT KQKRSLAAFH REVALVCKTH KLRVPARNTV ALRIAALDPL KTARRREGQD ASRDLQGVGG VPPAVTLPLE QIQIDHTVID
LIVVDERDRQ PIGRPYLTVA IDVFTRCVLG MVVTLEAPSA VSVGLCLVHV ACDKRPWLEG LNVEMDWPMS GKPKLLYLDN AAEFKSEALR RGCEQHGIQL
DYRPPGQPHY GGIVERIIGT AMQMIHDELP GTTFSNPDQR GDYDSENKAA LTLHELERWL TLAVGTYHGS VHNGLLQPPV ARWSEAVTRV GVPAVVTRAT
AFLVDFLPII RRTLTRTGFV IDHIHYYADT LKPWIARRDR WPAFLIRRDP RDISRIWVLE PEGQHYLEIP YRTLSHPAVT LWEQRQALTK LRQQGREQVD
ESALFRMIGQ MREIVTTAQK ATRKARRDAD RRQHLKASVP PDKPTPPETD VADPQADNLP PAKPFDQIEE W
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| RHH_6 |
RHH_6 |
Tn1412 |
240 |
15370-15609 |
+ |
| Class: | Passenger Gene |
| Sub Class: | Antitoxin |
| Function: | antitoxin; binds to DNA(IPR031914) |
| Sequence Family: | RHH_6 (Pfam:PF16762) |
| Comment: | Pfam PF16762.4 |
Protein Sequence:
|
MNTIRWNVAV SADTDQSLRM FLASQGGGRK GDLSRFIEEA VRAHILELSA EQAKAANAHL SEAELTNAVD EALDWARKR
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| PIN_3 |
PIN_3 |
Tn1412 |
432 |
15609-16040 |
+ |
| Class: | Passenger Gene |
| Sub Class: | Toxin |
| Function: | toxin; ribonuclease activity(IPR002716) |
| Target: | single stranded RNA |
| Sequence Family: | PIN_3 (Pfam:PF13470) |
Protein Sequence:
|
MRVVLDTNIL FSALISPHGA PDAIYRAWRA ARFEVVTSRM QLDEIRRASR YPKLQAILQP AKVGAMINNL QRAVVLERLT IEVEADDPDD SFLLAMALAG
DADYLITGDR RAGLLQRGHI ERRGSSRPPC SASRCCDQCR SVF
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| tnpA |
TnpA |
Tn1412 |
2994 |
16022-19015 |
+ |
| Class: | Transposase |
| Transpoase Chemistry: | DDE |
Protein Sequence:
|
MPVGFLTQEQ RDGFGRYVDS PSREELERYF HLSDEDREAI QVLRGNHNRL GYAVLLTTVR FVGVLPDKPA AVPVEVLQVL CRQLAIPDPD CLQRYSDHRR
WIHATDIQNR FGYRHFTDPG IGFRLSRWLY ALCWTGTDRP GVLFERATSW LFTQKVLLPG VSQLERFIAQ LRSRVEERLW FTLGRSVTEE QRLQLQDLLT
VAEGNRSSRL DQLRSGPVMV SGPALIRALR RLDDVRGIGI TLPAAAHIPP SRIAALARFA NTAKVTAINR LPASRRMATL VAFALCLEAT AHDDALEVLE
ALLRDLFSNA EKADKKARMR SLKDLDRSAA TLAAACKVVL DSSISDDNVR ARLFNDLPRT TLEKALEEVN ALIRPVDDVY FLALEARYRS VRRFLPDLLK
HIRFGFSPAG KGVAASLEWL QLNLPRRKPE DDAPQEIVAK AWQKHITRED GSLDMGAYVF CTLDALRTAL RRRDVFVSPS WRYADPRLGL LDGAEWLAAR
PIICRSLGLT IDAKTTLDAL SVELDATWLA VAARLPDNPA IQLSENTEGK TELSLGALDK LDEPCSLLQL RAAVSDLMPR VDLPEILLEI AARTGFSEAF
THVSERNARA DNLVTSLCAV LLGGACNTGL EPLIRTDNPA LRRDRLSWVS QNYIRDDTLS AANAILVGAQ SQLELAQVWG GGEVASADGM RFVVPVRTVH
AGPNPKYFGT GRGVTWYNLI SDQFSGLNAI TVPGTLRDSL VLLAVVLEQQ TELQPTQIMT DTGAYSDVVF GLFRLLGYHF SPRLADVGGT RFWRTRPDAD
YGKLNGLARQ SVKLDLIAEH WDDLLRLAGS LKLGRVPATG IMRTLQTGDR PTRLAQALAE FGRIEKTLHT LTYIDDESKR RATLTQLNRG EGRHSLARAV
FHGKRGELRQ RYREGQEDQL GALGLVVNII VLWNTLYMTA AVERLKQHGY PVLEEDLARL SPLIYEHINM LGRYSFAVPE EVARGELRPL RNPDDDL
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| merP |
MerP |
Tn1412 |
276 |
19248-19523 |
- |
| Class: | Passenger Gene |
| Sub Class: | Heavy Metal Resistance |
| Target: | Mercury |
| Comment: | periplasmic binding protein |
Protein Sequence:
|
MRKLLIAVLF ALPFVALAAP PKTVTLDVQN MTCGLCPITV KKSLEKVSGV SDVQVNFDQK TATVTYDPDK AQPEALTEAT ANAGYPSTVQ K
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| merT |
MerT |
Tn1412 |
357 |
19536-19892 |
- |
| Class: | Passenger Gene |
| Sub Class: | Heavy Metal Resistance |
| Target: | Mercury |
| Comment: | transport protein |
Protein Sequence:
|
MGMGMQLTGK GSLVASSLTA IGASVCCVGP LVLLALGVGG TWVGALTMME PLRPLFIGLT LLFLGLAFRK LYLVPQVCTP GTPCADPRTL VRQRLVFWIV
SVLLLGLLAV PWLAPLFY
|
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| merR |
MerR |
Tn1412 |
399 |
19961-20359 |
+ |
| Class: | Passenger Gene |
| Sub Class: | Heavy Metal Resistance |
| Target: | Mercury |
| Comment: | regulatory protein |
Protein Sequence:
|
MATELTTGKL ADAAGVNVET IRYYQRRGLL DEPAKPLGGH RRYPVDMVKR LRFIKRAQAL GFTLSEVGGL LTLDESCACA ETRARAARKL ALIEQKMADL
VVMQQLLGEL VQQCDAGDGG TICPIIEALI RE
|
|
| Internal Transposable Elements (TE) |
|
|
| TnCentral Accession |
TE Name |
Type |
Coordinates |
Length |
| In32-L36547 |
In32 |
Integron |
1070-15262 |
14193 |
| Tn4352-M20306 |
Tn4352 |
Transposon |
8183-10862 |
2680 |
| IS26-MH257753 |
IS26 |
Insertion Sequence |
8183-9002 |
820 |
| IS26-MH257753 |
IS26 |
Insertion Sequence |
10043-10862 |
820 |
|
| Internal Repeat Elements |
|
|
| Name |
Associated Mobile Element |
Coordinates |
Sequence (Top Strand) |
| IRi |
In32 |
1070-1102 |
TGTCGTTTTC AGAAGACGGC TGCACTGAAC GTC |
| repeat i1 |
In32 |
1078-1096 |
TCAGAAGACG GCTGCACTG |
| repeat i2 |
In32 |
1101-1119 |
TCAGAAGCCG ACTGCACTA |
| repeat i3 |
In32 |
1143-1161 |
TCAGGCAACG ACGGGCTGC |
| repeat i4 |
In32 |
1171-1189 |
TCAGCGGACG CAGGGAGGA |
| IRi |
Tn402 |
6981-7013 |
TGTCGTTTTC AGAAGACGGC TGCACTGAAC GTC |
| IRi |
In32 |
6981-7013 |
TGTCGTTTTC AGAAGACGGC TGCACTGAAC GTC |
| repeat i1 |
In32 |
6989-7007 |
TCAGAAGACG GCTGCACTG |
| repeat i2 |
In32 |
7012-7030 |
TCAGAAGCCG ACTGCACTA |
| repeat i3 |
In32 |
7054-7072 |
TCAGGCAACG ACGGGCTGC |
| IR |
IS26 |
8183-8196 |
GGCACTGTTG CAAA |
| IR |
IS26 |
8989-9002 |
AAACGTTGTC ACGG |
| IR |
IS26 |
10043-10056 |
GGCACTGTTG CAAA |
| IR |
IS26 |
10849-10862 |
AAACGTTGTC ACGG |
| repeat t4 |
In32 |
15135-15153 |
ACCACGTGTG CTCATAACT |
| repeat t1 |
In32 |
15236-15254 |
ACCACGTCAG CAGAAGACT |
| IRt |
In32 |
15238-15262 |
CACGTCAGCA GAAGACTTTT GCTGT |
|
| References |
|
|
| 1. | Partridge SR, Recchia GD, Stokes HW, Hall RM. Family of class 1 integrons related to In4 from Tn1696. Antimicrob Agents Chemother. 2001 Nov;45(11):3014-20. doi: 10.1128/AAC.45.11.3014-3020.2001. PubMed ID: 11600350
| | | 2. | Szuplewska M, Ludwiczak M, Lyzwa K, Czarnecki J, Bartosik D. Mobility and generation of mosaic non-autonomous transposons by Tn3-derived inverted-repeat miniature elements (TIMEs). PLoS One. 2014 Aug 14;9(8):e105010. doi: 10.1371/journal.pone.0105010. eCollection 2014. PubMed ID: 25121765
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