Transposon
Name: Tn1412
Family: Tn3        Group: Tn3
Evidence of Transposition: no
 Host     

Host Organism:Pseudomonas aeruginosa 2293E
Date of Isolation:2001

 Map     



 Terminal Inverted Repeats (IR)     


 Sequence     
DNA SequenceLength  20450 
--------10 --------20 --------30 --------40 --------50 --------60 --------70 --------80 --------90 -------100
GGGGTTTGGG GAGCAATGGA ACCAAAAACC AACGTAAGCC CTACCAACGC TTTTCGGTGT CTTCTTCCCA GGCGCCCATC TCGACAAAAC AGTTGCGCAT 100
GTCGGCCTCC TGGCTGATCT CGGTCAGCAG GTCATGCACG CTCTTGTCCA GCTCATCGTC GCTCCGATAC GGAATGGTCA ACTCATAGTG GCCGGCATCC 200
AGCCGCTTCA TGCCATAGGG CTCCAGGCAG TAGCGCTCAA TGTTCTCCGT GGCCCGCTTC CGGCCGCGCA CGAACTTGCT GTTATTCACC ACCGCGAGGC 300
GCAGGGTGAC GGTGGCCACC CGCTCGGCGG CGGGCGGCTC TGCCGGCGAC GCGGCCGAAG CGTGCTGGTC GCGTGACCTG GCGCTCTTCT GGTACGCGCC 400
GATCTCGACA CCACGGTGGC GCAGGTAGCT GTACAGCGTG CTCTTGGAGA TGTGCAGCTT CTCGCCGATC GCGCTGACGC TCAGGCGACC TTCGCGGTAG 500
AGGGTTTCGG CCGCCATGGC GGTGGCCTCA GCCTTGGCTG GCAGGCCCTT GGGACGGCCA CCGATCCGGC CACGCGCCCG TGCGGCCGAC AGACCCGCCT 600
GAGTCCGCTC GCGGATCAGC TCGCGCTCGA ACTCCGCCAG CGAGGCGAAC AGGTTGAACA CCAGGCGGCC TTGGGCGTGG GTGGTGTCGA TGGGGTCATT 700
CAGGCTCTGT AAGCCGACCT TGCGCTCTGC CAGCTCGCCG ACCAACTCGA CCAGGTGCTT GAGGGAACGC CCAAGGCGAT CCAGCTTCCA GATCACCACG 800
GCATCACCCG GCCGCACGTT GGCCAGCAGT TTGTCCAACT CCGGCCGGGC GCTTTTCGCG CCGCTGGCGA TGTCTTGGTA GATGCGTTCG CACCCGGCCT 900
GTTTCAGGGC ATCGACTTGT AGGTCGGCTT TCTGATCCCG AGTGCTCACT CGCGCATAAC CGATCTTCAT CAAAAGTACT GTTTACTCGA CTACGTTAGT 1000
AATAGTTGAA CTTTGATTAA GCGTACCAGT TATTTGAACC GTAGCGCGGG GAGCTTAACG AACCGAGCCT GTCGTTTTCA GAAGACGGCT GCACTGAACG 1100
TCAGAAGCCG ACTGCACTAT AGCAGCGGAG GGGTTGGATC CATCAGGCAA CGACGGGCTG CTGCCGGCCA TCAGCGGACG CAGGGAGGAC TTTCCGCAAC 1200
CGGCCGTTCG ATGCGGCACC GATGGCCTTC GCGCAGGGGT AGTGAATCCG CCAGGATTGA CTTGCGCTGC CCTACCTCTC ACTAGTGAGG GGCGGCAGCG 1300
CATCAAGCGG TGAGCGCACT CCGGCACCGC CAACTTTCAG CACATGCGTG TAAATCATCG TCGTAGAGAC GTCGGAATGG CCGAGCAGAT CCTGCACGGT 1400
TCGAATGTCG TAACCGCTGC GGAGCAAGGC CGTCGCGAAC GAGTGGCGGA GGGTGTGCGG TGTGGCGGGC TTCGTGATGC CTGCTTGTTC TACGGCACGT 1500
TTGAAGGCGC GCTGAAAGGT CTGGTCATAC ATGTGATGGC GACGCACGAC ACCGCTCCGT GGATCGGTCG AATGCGTGTG CTGCGCAAAA ACCCAGAACC 1600
ACGGCCAGGA ATGCCCGGCG CGCGGATACT TCCGCTCAAG GGCGTCGGGA AGCGCAACGC CGCTGCGGCC CTCGGCCTGG TCCTTCAGCC ACCATGCCCG 1700
TGCACGCGAC AGCTGCTCGC GCAGGCTGGG TGCCAAGCTC TCGGGTAACA TCAAGGCCCG ATCCTTGGAG CCCTTGCCCT CCCGCACGAT GATCGTGCCG 1800
TGATCGAAAT CCAGATCCTT GACCCGCAGT TGCAAACCCT CACTGATCCG CATGCCCGTT CCATACAGAA GCTGGGCGAA CAAACGATGC TCGCCTTCCA 1900
GAAAACCGAG GATGCGAACC ACTTCATCCG GGGTCAGCAC CACCGGCAAG CGCCGCGACG GCCGAGGTCT TCCGATCTCC TGAAGCCAGG GCAGATCCGT 2000
GCACAGCACC TTGCCGTAGA AGAACAGCAA GGCCGCCAAT GCCTGACGAT GCGTGGAGAC CGAAACCTTG CGCTCGTTCG CCAGCCAGGA CAGAAATGCC 2100
TCGACTTCGC TGCTGCCCAA GGTTGCCGGG TGACGCACAC CGTGGAAACG GATGAAGGCA CGAACCCAGT GGACATAAGC CTGTTCGGTT CGTAAGCTGT 2200
AATGCAAGTA GCGTATGCGC TCACGCAACT GGTCCAGAAC CTTGACCGAA CGCAGCGGTG GTAACGGCGC AGTGGCGGTT TTCATGGCTT GTTATGACTG 2300
TTTTTTTGTA CAGTCTATGC CTCGGGCATC CAAGCAGCAA GCGCGTTACG CCGTGGGTCG ATGTTTGATG TTATGGAGCA GCAACGATGT TACGCAGCAG 2400
GGCAGTCGCC CTAAAACAAA GTTAGGCCGC ATGGACACAA CGCAGGTCAC ATTGATACAC AAAATTCTAG CTGCGGCAGA TGAGCGAAAT CTGCCGCTCT 2500
GGATCGGTGG GGGCTGGGCG ATCGATGCAC GGCTAGGGCG TGTAACACGC AAGCACGATG ATATTGATCT GACGTTTCCC GGCGAGAGGC GCGGCGAGCT 2600
CGAGGCAATA GTTGAAATGC TCGGCGGGCG CGTCATGGAG GAGTTGGACT ATGGATTCTT AGCGGAGATC GGGGATGAGT TACTTGACTG CGAACCTGCT 2700
TGGTGGGCAG ACGAAGCGTA TGAAATCGCG GAGGCTCCGC AGGGCTCGTG CCCAGAGGCG GCTGAGGGCG TCATCGCCGG GCGGCCAGTC CGTTGTAACA 2800
GCTGGGAGGC GATCATCTGG GATTACTTTT ACTATGCCGA TGAAGTACCA CCAGTGGACT GGCCTACAAA GCACATAGAG TCCTACAGGC TCGCATGCAC 2900
CTCACTCGGG GCGGAAAAGG TTGAGGTCTT GCGTGCCGCT TTCAGGTCGC GATATGCGGC CTAACAATTC GTCCAAGCCG ACGCCGCTTC GCGGCGCGGC 3000
TTAACTCAGG TGTTAAACAT CATGAGGGAA GCGGTGATCG CCGAAGTATC GACTCAACTA TCAGAGGTAG TTGGCGTCAT CGAGCGCCAT CTCGAACCGA 3100
CGTTGCTGGC CGTACATTTG TACGGCTCCG CAGTGGATGG CGGCCTGAAG CCACACAGTG ATATTGATTT GCTGGTTACG GTGACCGTAA GGCTTGATGA 3200
AACAACGCGG CGAGCTTTGA TCAACGACCT TTTGGAAACT TCGGCTTCCC CTGGAGAGAG CGAGATTCTC CGCGCTGTAG AAGTCACCAT TGTTGTGCAC 3300
GACGACATCA TTCCGTGGCG TTATCCAGCT AAGCGCGAAC TGCAATTTGG AGAATGGCAG CGCAATGACA TTCTTGCAGG TATCTTCGAG CCAGCCACGA 3400
TCGACATTGA TCTGGCTATC TTGCTGACAA AAGCAAGAGA ACATAGCGTT GCCTTGGTAG GTCCAGCGGC GGAGGAACTC TTTGATCCGG TTCCTGAACA 3500
GGATCTATTT GAGGCGCTAA ATGAAACCTT AACGCTATGG AACTCGCCGC CCGACTGGGC TGGCGATGAG CGAAATGTAG TGCTTACGTT GTCCCGCATT 3600
TGGTACAGCG CAGTAACCGG CAAAATCGCG CCGAAGGATG TCGCTGCCGA CTGGGCAATG GAGCGCCTGC CGGCCCAGTA TCAGCCCGTC ATACTTGAAG 3700
CTAGGCAGGC TTATCTTGGA CAAGAAGAAG ATCGCTTGGC CTCGCGCGCA GATCAGTTGG AAGAATTTGT TCACTACGTG AAAGGCGAGA TCACCAAGGT 3800
AGTCGGCAAA TAATGTCTAA CAATTCGTTC AAGCCGACGC CGCTTCGCGG CGCGGCTTAC CTTGGCCGTT AGGCCGCATG GACACAACGC AGGTCACATT 3900
GATACACAAA ATTCTAGCTG CGGCAGATGA GCGAAATCTG CCGCTCTGGA TCGGTGGGGG CTGGGCGATC GATGCACGGC TAGGGCGTGT AACACGCAAG 4000
CACGATGATA TTGATCTGAC GTTTCCCGGC GAGAGGCGCG GCGAGCTCGA GGCAATAGTT GAAATGCTCG GCGGGCGCGT CATGGAGGAG TTGGACTATG 4100
GATTCTTAGC GGAGATCGGG GATGAGTTAC TTGACTGCGA ACCTGCTTGG TGGGCAGACG AAGCGTATGA AATCGCGGAG GCTCCGCAGG GCTCGTGCCC 4200
AGAGGCGGCT GAGGGCGTCA TCGCCGGGCG GCCAGTCCGT TGTAACAGCT GGGAGGCGAT CATCTGGGAT TACTTTTACT ATGCCGATGA AGTACCACCA 4300
GTGGACTGGC CTACAAAGCA CATAGAGTCC TACAGGCTCG CATGCACCTC ACTCGGGGCG GAAAAGGTTG AGGTCTTGCG TGCCGCTTTC AGGTCGCGAT 4400
ATGCGGCCTA ACAATTCGTC CAAGCCGACG CCGCTTCGCG GCGCGGCTTA ACTCAGGTGT TAAACATCAT GAGGGAAGCG GTGATCGCCG AAGTATCGAC 4500
TCAACTATCA GAGGTAGTTG GCGTCATCGA GCGCCATCTC GAACCGACGT TGCTGGCCGT ACATTTGTAC GGCTCCGCAG TGGATGGCGG CCTGAAGCCA 4600
CACAGTGATA TTGATTTGCT GGTTACGGTG ACCGTAAGGC TTGATGAAAC AACGCGGCGA GCTTTGATCA ACGACCTTTT GGAAACTTCG GCTTCCCCTG 4700
GAGAGAGCGA GATTCTCCGC GCTGTAGAAG TCACCATTGT TGTGCACGAC GACATCATTC CGTGGCGTTA TCCAGCTAAG CGCGAACTGC AATTTGGAGA 4800
ATGGCAGCGC AATGACATTC TTGCAGGTAT CTTCGAGCCA GCCACGATCG ACATTGATCT GGCTATCTTG CTGACAAAAG CAAGAGAACA TAGCGTTGCC 4900
TTGGTAGGTC CAGCGGCGGA GGAACTCTTT GATCCGGTTC CTGAACAGGA TCTATTTGAG GCGCTAAATG AAACCTTAAC GCTATGGAAC TCGCCGCCCG 5000
ACTGGGCTGG CGATGAGCGA AATGTAGTGC TTACGTTGTC CCGCATTTGG TACAGCGCAG TAACCGGCAA AATCGCGCCG AAGGATGTCG CTGCCGACTG 5100
GGCAATGGAG CGCCTGCCGG CCCAGTATCA GCCCGTCATA CTTGAAGCTA GGCAGGCTTA TCTTGGACAA GAAGAAGATC GCTTGGCCTC GCGCGCAGAT 5200
CAGTTGGAAG AATTTGTTCA CTACGTGAAA GGCGAGATCA CCAAGGTAGT CGGCAAATAA TGTCTAACAA TTCGTTCAAG CCGACGCCGC TTCGCGGCGC 5300
GGCTTACCTT GGCCGTTAGA TGCACTAAGC ACATAATTGC TCACAGCCAA ACTATCAGGT CAAGTCTGCT TTTATTATTT TTAAGCGTGC ATAATAAGCC 5400
CTACACAAAT TGGGAGATAT ATCATGAAAG GCTGGCTTTT TCTTGTTATC GCAATAGTTG GCGAAGTAAT CGCAACATCC GCATTAAAAT CTAGCGAGGG 5500
CTTTACTAAG CTTGCCCCTT CCGCCGTTGT CATAATCGGT TATGGCATCG CATTTTATTT TCTTTCTCTG GTTCTGAAAT CCATCCCTGT CGGTGTTGCT 5600
TATGCAGTCT GGTCGGGACT CGGCGTCGTC ATAATTACAG CCATTGCCTG GTTGCTTCAT GGGCAAAAGC TTGATGCGTG GGGCTTTGTA GGTATGGGGC 5700
TCATAATTGC TGCCTTTTTG CTCGCCCGAT CCCCATCGTG GAAGTCGCTG CGGAGGCCGA CGCCATGGTG ACGGTGTTCG GCATTCTGAA TCTCACCGAG 5800
GACTCCTTCT TCGATGAGAG CCGGCGGCTA GACCCCGCCG GCGCTGTCAC CGCGGCGATC GAAATGCTGC GAGTCGGATC AGACGTCGTG GATGTCGGAC 5900
CGGCCGCCAG CCATCCGGAC GCGAGGCCTG TATCGCCGGC CGATGAGATC AGACGTATTG CGCCGCTCTT AGACGCCCTG TCCGATCAGA TGCACCGTGT 6000
TTCAATCGAC AGCTTCCAAC CGGAAACCCA GCGCTATGCG CTCAAGCGCG GCGTGGGCTA CCTGAACGAT ATCCAAGGAT TTCCTGACCC TGCGCTCTAT 6100
CCCGATATTG CTGAGGCGGA CTGCAGGCTG GTGGTTATGC ACTCAGCGCA GCGGGATGGC ATCGCCACCC GCACCGGTCA CCTTCGACCC GAAGACGCGC 6200
TCGACGAGAT TGTGCGGTTC TTCGAGGCGC GGGTTTCCGC CTTGCGACGG AGCGGGGTCG CTGCCGACCG GCTCATCCTC GATCCGGGGA TGGGATTTTT 6300
CTTGAGCCCC GCACCGGAAA CATCGCTGCA CGTGCTGTCG AACCTTCAAA AGCTGAAGTC GGCGTTGGGG CTTCCGCTAT TGGTCTCGGT GTCGCGGAAA 6400
TCCTTCTTGG GCGCCACCGT TGGCCTTCCT GTAAAGGATC TGGGTCCAGC GAGCCTTGCG GCGGAACTTC ACGCGATCGG CAATGGCGCT GACTACGTCC 6500
GCACCCACGC GCCTGGAGAT CTGCGAAGCG CAATCACCTT CTCGGAAACC CTCGCGAAAT TTCGCAGTCG CGACGCCAGA GACCGAGGGT TAGATCATGC 6600
CTAGCATTCA CCTTCCGGCC GCCCGCTAGC GGACCCTGGT CAGGTTCCGC GAAGGTGGGC GCAGACATGC TGGGCTCGTC AGGATCAAAC TGCACTATGA 6700
GGCGGCGGTT CATACCGCGC CAGGGGAGCG AATGGACAGC GAGGAGCCTC CGAACGTTCG GGTCGCCTGC TCGGGTGATA TCGACGAGGT TGTGCGGCTG 6800
ATGCACGACG CTGCGGCGTG GATGTCCGCC AAGGGAACGC CCGCCTGGGA CGTCGCGCGG ATCGACCGGA CATTCGCGGA GACCTTCGTC CTGAGATCCG 6900
AGCTCCTAGT CGCGAGTTGC AGCGACGGCA TCGTCGGCTG TTGCACCTTG TCGGCCGAGG ATCCCGAGTT CTGGCCCGAC TGTCGTTTTC AGAAGACGGC 7000
TGCACTGAAC GTCAGAAGCC GACTGCACTA TAGCAGCGGA GGGGTTGGAT CCATCAGGCA ACGACGGGCT GCTGCCGGCC AGAAGCGGCC ATTGATTCTT 7100
ACGTTTGAAT TCACTACCAT TGTGCGCCGA TAACAACTCC GTGAGTCCGA TTTCCCTATG CTAAAGAGCA CCCTTCTGGC CTTTGGTCTC TTTATTGCGC 7200
TCTCAGCGCG TGCAGAGAAC CAGGCAATCG CCAAGCTTTT CCTGAGGGCA GGGGTCGATG GGACCATCGT CATCGAGTCT CTAACCACCG GACAGCGCTT 7300
GGTTCACAAC GATCCTCGTG CGCAACAACG ATACCCGGCA GCTTCCACGT TCAAGGTACT CAATACCTTG ATTGCTCTCG AAGAGGGCGC CATTTCAGGT 7400
GAGAACCAGA TCTTTCACTG GAACGGTACC CAGTATTCGA TTGCGAATTG GAACCAGGAC CAGACTCTAG ACAGTGCGTT TAAAGTGAGT TGTGTCTGGT 7500
GCTACCAGCA GATTGCCCTT CGAGTGGGGG CACTCAAGTA CCCAGCCTAT ATTCAACAGA CAAACTATGG TCATTTACTG GAACCCTTCA ATGGAACGGA 7600
GTTTTGGCTG GATGGCTCTT TGACGATCAG CGCGGAAGAA CAGGTTGCCT TTCTCCGACA GGTTGTTGAG CGAAAACTAC CGTTCAAGGC GAGCAGCTAT 7700
GATTCCCTGA AGAAAGTCAT GTTCGCCGAT GAGAATGCCC AGTATCGCCT TTATGCAAAA ACAGGTTGGG CGACCCGCAT GACTCCCTCG GTGGGTTGGT 7800
ATGTTGGCTA TGTTGAAGCA AAGGACGATG TTTGGCTGTT TGCCCTGAAT CTTGCTACCC GCGACGCGAA TGACCTGCCC CTACGAACGC AGATAGCCAA 7900
AGACGCGCTG AAGGCGATAG GTGCGTTTCC TACGAAGTAA CGTCGGCTCC TGGGAGACGC TCAGTGTCAG GTTTGGGTCG ACACCGGTAA TCGGATCGTT 8000
GCCGCACTGA ACAGCGCCCC GTTCCAGGTC GCCTCCATTT ATGCGGCTGA ACCGAGGGAG AGCAGCTTTA CGCCGTCTGG CCGCAGTTCG CCCTTGGGCG 8100
ACACGTGCCG GTAGAGCGTC TGCCGGGTAA TCCCGAGTTC CTTCGCAGAG ATCGCCCACC TTGGTTTCCG GTTGCCCCAT GCGGCACTGT TGCAAATAGT 8200
CGGTGGTGAT AAACTTATCA TCCCCTTTTG CTGATGGAGC TGCACATGAA CCCATTCAAA GGCCGGCATT TTCAGCGTGA CATCATTCTG TGGGCCGTAC 8300
GCTGGTACTG CAAATACGGC ATCAGTTACC GTGAGCTGCA GGAGATGCTG GCTGAACGCG GAGTGAATGT CGATCACTCC ACGATTTACC GCTGGGTTCA 8400
GCGTTATGCG CCTGAAATGG AAAAACGGCT GCGCTGGTAC TGGCGTAACC CTTCCGATCT TTGCCCGTGG CACATGGATG AAACCTACGT GAAGGTCAAT 8500
GGCCGCTGGG CGTATCTGTA CCGGGCCGTC GACAGCCGGG GCCGCACTGT CGATTTTTAT CTCTCCTCCC GTCGTAACAG CAAAGCTGCA TACCGGTTTC 8600
TGGGTAAAAT CCTCAACAAC GTGAAGAAGT GGCAGATCCC GCGATTCATC AACACGGATA AAGCGCCCGC CTATGGTCGC GCGCTTGCTC TGCTCAAACG 8700
CGAAGGCCGG TGCCCGTCTG ACGTTGAACA CCGACAGATT AAGTACCGGA ACAACGTGAT TGAATGCGAT CATGGCAAAC TGAAACGGAT AATCGGCGCC 8800
ACGCTGGGAT TTAAATCCAT GAAGACGGCT TACGCCACCA TCAAAGGTAT TGAGGTGATG CGTGCACTAC GCAAAGGCCA GGCCTCAGCA TTTTATTATG 8900
GTGATCCCCT GGGCGAAATG CGCCTGGTAA GCAGAGTTTT TGAAATGTAA GGCCTTTGAA TAAGACAAAA GGCTGCCTCA TCGCTAACTT TGCAACAGTG 9000
CCAATTTATG AGTAAAGGAT TATGTCCACG ATAAGCACCT GGGTCGATTC CTGGGAGGCG GCCATGAGGG TAGGGAAGCG CCGTCCCGTC AAGTCAGCGT 9100
AATGCTCTGC CAGTGTTACA ACCAATTAAC CAATTCTGAT TAGAAAAACT CATCGAGCAT CAAATGAAAC TGCAATTTAT TCATATCAGG ATTATCAATA 9200
CCATATTTTT GAAAAAGCCG TTTCTGTAAT GAAGGAGAAA ACTCACCGAG GCAGTTCCAT AGGATGGCAA GATCCTGGTA TCGGTCTGCG ATTCCGACTC 9300
GTCCAACATC AATACAACCT ATTAATTTCC CCTCGTCAAA AATAAGGTTA TCAAGTGAGA AATCACCATG AGTGACGACT GAATCCGGTG AGAATGGCAA 9400
AAGCTTATGC ATTTCTTTCC AGACTTGTTC AACAGGCCAG CCATTACGCT CGTCATCAAA ATCACTCGCA TCAACCAAAC CGTTATTCAT TCGTGATTGC 9500
GCCTGAGCGA GACGAAATAC GCGATCGCTG TTAAAAGGAC AATTACAAAC AGGAATCGAA TGCAACCGGC GCAGGAACAC TGCCAGCGCA TCAACAATAT 9600
TTTCACCTGA ATCAGGATAT TCTTCTAATA CCTGGAATGC TGTTTTCCCG GGGATCGCAG TGGTGAGTAA CCATGCATCA TCAGGAGTAC GGATAAAATG 9700
CTTGATGGTC GGAAGAGGCA TAAATTCCGT CAGCCAGTTT AGTCTGACCA TCTCATCTGT AACATCATTG GCAACGCTAC CTTTGCCATG TTTCAGAAAC 9800
AACTCTGGCG CATCGGGCTT CCCATACAAT CGATAGATTG TCGCACCTGA TTGCCCGACA TTATCGCGAG CCCATTTATA CCCATATAAA TCAGCATCCA 9900
TGTTGGAATT TAATCGCGGC CTCGAGCAAG ACGTTTCCCG TTGAATATGG CTCATAACAC CCCTTGTATT ACTGTTTATG TAAGCAGACA GTTTTATTGT 10000
TCATGATGAT ATATTTTTAT CTTGTGCAAT GTAACATCAG AGGGCACTGT TGCAAATAGT CGGTGGTGAT AAACTTATCA TCCCCTTTTG CTGATGGAGC 10100
TGCACATGAA CCCATTCAAA GGCCGGCATT TTCAGCGTGA CATCATTCTG TGGGCCGTAC GCTGGTACTG CAAATACGGC ATCAGTTACC GTGAGCTGCA 10200
GGAGATGCTG GCTGAACGCG GAGTGAATGT CGATCACTCC ACGATTTACC GCTGGGTTCA GCGTTATGCG CCTGAAATGG AAAAACGGCT GCGCTGGTAC 10300
TGGCGTAACC CTTCCGATCT TTGCCCGTGG CACATGGATG AAACCTACGT GAAGGTCAAT GGCCGCTGGG CGTATCTGTA CCGGGCCGTC GACAGCCGGG 10400
GCCGCACTGT CGATTTTTAT CTCTCCTCCC GTCGTAACAG CAAAGCTGCA TACCGGTTTC TGGGTAAAAT CCTCAACAAC GTGAAGAAGT GGCAGATCCC 10500
GCGATTCATC AACACGGATA AAGCGCCCGC CTATGGTCGC GCGCTTGCTC TGCTCAAACG CGAAGGCCGG TGCCCGTCTG ACGTTGAACA CCGACAGATT 10600
AAGTACCGGA ACAACGTGAT TGAATGCGAT CATGGCAAAC TGAAACGGAT AATCGGCGCC ACGCTGGGAT TTAAATCCAT GAAGACGGCT TACGCCACCA 10700
TCAAAGGTAT TGAGGTGATG CGTGCACTAC GCAAAGGCCA GGCCTCAGCA TTTTATTATG GTGATCCCCT GGGCGAAATG CGCCTGGTAA GCAGAGTTTT 10800
TGAAATGTAA GGCCTTTGAA TAAGACAAAA GGCTGCCTCA TCGCTAACTT TGCAACAGTG CCACTGTTCG CTCGGAAATC AACTCACGCT CGAACTCGGC 10900
CAGCGCGGCA AAAATACCGA ACACAAGCTT GCCGGCGGCA GTCGTCGTGT CGACCGCCGC ACCGTGACCG GTCAGGACCT TCAGGCCCAC GCTACGCGCA 11000
GTTAGGTCGT GCACGGTGTT GATCAGGTGG CGCAGATCAC GGCCAAGCCG ATCGAGCTTC CACACGATCA GCGTGTCCCC TTCACGAAGC GCCTTCAGGC 11100
AAGCAGCCAA CCCTGGGCGA TCATCGCGCC TGCCCGAGGC CAGATCCTCG TAAAGGTGCG CAAGGCTCAC ACCAGCGGCG ATGAGCGCAT CGCGTTGCAA 11200
ATTGGTGGAC TGGGATCCGT CCGCCTTCGA TACCCGCATG TAGCCGATCA GCACCTTTTC ACCCGTCACG TATACGTTCG ATTATGTGAC AGTATGGAAT 11300
GGAAAGCTCT CGCCGTCAAA ATTTGTCACT TAACCCGTCA TTTAGTCTAC GGCATGTAAA GGGGCCGTCT GGCTCATAAT GTGACAGAAA TTCAGGGGGA 11400
ATGCCCTCCT TGGTAAAGGT GACGCGCAAA CGCTCCAGGG ATTCAGGGTC ACGCTGTCCA AAGGATGCCA TCGCGAATAA CGAGCGGGCT ATCTCGGAGT 11500
CGTGCCGCGC TTCGATAATG GCATCGTTGA TTGCTTTGAG GGCTTGTTGC CAATAGTTGA CGGGTTCCTT CTTCCGCTCA ACCGCTGGCA GGCCGTTGGT 11600
GAACTCAGTT TGTGGCTCTG ACCGGAACAG CGTTGCCAGT TCTCCGCGTG GACTCAACAC CTTCGATTCG ATCAGGTCGA TGGCGGTTGC CGCTGCCTCC 11700
AATATCTGCA ACTGCACCGA TGAGTCCAGA ATCTCGTAGG GATGCCACAG ACTTTGCCCG GCGCGCAGCG GATGGCCGCA GCGCTCCCAG ACATAGCGGA 11800
TACTGCCAGC GCAAGTCCCG CAATGCGAGA GCGGGGTATT CAGCTCATCC AGCAGTGTAC GCAGCAGCCG GAACCACAAA CCGGCATGGA CGGGCCGGCG 11900
CGGCAACTCG ACGTATCCTG CTGTCAGTGC TTGCCAGGTG CGCCGGTCCA TCGTCGCAAT CGCGTCACTG GCCATGCGCG GGGCAGCGTC GGCCTTCTCC 12000
CAGCCAAGCA CACGCCCTGG CAGGCCCCAA TACGATTCCA GCCAGCATCC ATGCAGGGGA CAGCTCAGCA TCAGGGGTAG CTTCCACGCG AGCAGTACCG 12100
CCTGGTTCGC TGAATCATTC AGGCAGAGTG GGCAGGCCCG ACGGATTGGC TGACTGGGCA GCCACGCGCG CCAGCTCGTG ACCGATCTCG TCTTGCGGTT 12200
GCGTTTTGGC AGCATTACCG AGAACTGGAA CGCATAGATT TCCAGGGCGG ACGGAACCCG GTCATCGAGG CTATCCAGCA GCCATGGCAC CCAGCCGGCA 12300
AAACTCATGC AGCGCAGTTG GTCCAGCTCG ATGCCGCTTC GCCGGGAGAG TGCCGTCAGC AGCGACAGCG GCGGTGCGGT GTCCAGGTCA TCGACCTTGT 12400
CATGCCCAAG ATCGTGTTCC AACAAGTCAA GCATATCCAT CTGGTAGCAG ACGGCGACAC GATTGAGCCA CGAGGATAAG GCTTCGCCTT CCTTGGGAGC 12500
CGGATGCAGC GGCCAGCGTG GAGCTGGCTT CACATCAGTT CCCGCTCGAA CTGCCGACGC CGCTCGCTGG GACCGGTGTA ATCGGCCATG CTGAGCGTGC 12600
GGTGGTTGAT CGCTTCCTCA CCGCTCTCCA CAGGCGGCGA TGGCCGCCGC CATCAGCAAG TGCGCCAGTT CACCGATGGT GCCCTCGCTG CGCGTGAGCA 12700
GGTAGCGGGC CATGTCCAGC GTGGCAATCG ACGAGGGTCG CCGCAGTGGA AGCGAAGCGG CGAAGCTGGC GAGCAGTGAG CAGCAATCGT CGTTGGCCTC 12800
CCACACCGGC AGCATCATCG GCTCGAACCG ATTTTCCAAC TGGTCATCCG AACGGATGGC CAGGTAGGCG TCGCGCGTGC CGACGCCTAC CAGCGGGATG 12900
CGTAGTTCGT TGCCGAGGAA GCGCAGCAGG TTAAGGAATT CACGGCGGTT GACGCTGTTG CCGGCCAGGA CATTGTGCAG CTCGTCGATC ACCAGCATGC 13000
GCACGCCGAC CTTGCGCAGC AGCGCCAGTG CCAGTTGCTC CATTTCCGGT AGCCGTGGAC GCGGGCGCAA TGGCGCGCCC ATCGCGGCGA GCAGCGCGAC 13100
GTAGAACCGG ATTACTGACG GTTCGGATGG CATCTGAACG ACCAGTACCG GGATGTGCTC CTGGTCGGCG TCGGCGCTGG CCGGATGCGT GCGCCGGAAC 13200
TTCTCGACGA TCATCGACTT GCCGTTGTTG GTTGGGCCAA CCAGCAGCAG GTTGGGCATG CGCTGCTTGT TGGGCCACGC ATACAGGGTT TCCAGCCGGT 13300
TTAACGCTTC GACCGCGCGC GGATAGCCGA TCCAGCGGTC GGCGCGAAGG CGCTGGATGC GCTCGTCCGC CGGCAGCCGG GCCAGCCCCT GCGCCGTCGG 13400
CAGCAGGTGG GATAGATCGA TGATCGGATA TTCGTCCACG GCTACCACTC CTCAATCTGG TCGAACGGCT TGGCCGGTGG CAGGTTGTCC GCCTGCGGAT 13500
CAGCAACGTC CGTTTCTGGC GGAGTCGGCT TGTCCGGCGG AACCGACGCT TTGAGGTGCT GCCGTCGATC CGCATCACGC CGCGCCTTGC GCGTGGCTTT 13600
CTGCGCGGTG GTCACGATCT CGCGCATCTG CCCGATCATG CGGAACAGTG CTGATTCATC CACTTGTTCG CGCCCCTGTT GCCGCAATTT CGTCAGCGCC 13700
TGCCGTTGTT CCCACAGAGT GACAGCCGGG TGCGACAAGG TACGGTAGGG GATTTCCAGA TAGTGCTGAC CTTCCGGTTC CAGTACCCAG ATGCGGCTAA 13800
TGTCGCGCGG ATCGCGCCGG ATCAGGAAGG CAGGCCAGCG GTCGCGCCGC GCAATCCACG GCTTGAGCGT ATCGGCGTAA TAGTGGATGT GGTCGATGAC 13900
GAATCCGGTG CGGGTTAGTG TGCGGCGGAT GATGGGCAGG AAATCGACCA GGAATGCCGT GGCGCGGGTG ACGACGGCCG GGACGCCGAC ACGCGTCACG 14000
GCCTCAGACC AGCGCGCCAC CGGCGGCTGA AGCAGGCCGT TGTGCACCGA GCCGTGATAG GTGCCCACTG CCAATGTAAG CCAGCGCTCC AGCTCATGCA 14100
GGGTCAGGGC GGCCTTGTTT TCGGAATCGT AATCCCCGCG CTGGTCAGGG TTGGAGAAGG TCGTCCCCGG CAATTCATCG TGGATCATCT GCATCGCCGT 14200
GCCGATGATC CTTTCCACGA TGCCGCCGTA ATGGGGCTGC CCGGGCGGAC GATAGTCCAA TTGGATGCCA TGCTGCTCGC AGCCACGGCG CAGGGCCTCG 14300
CTTTTGAACT CGGCTGCGTT GTCCAGGTAG AGCAGCTTGG GCTTGCCGCT CATTGGCCAG TCCATCTCGA CATTCAGCCC CTCCAGCCAG GGACGCTTGT 14400
CGCAGGCAAC ATGCACAAGG CACAGGCCGA CCGAAACGGC GGACGGTGCT TCCAGCGTGA CGACCATGCC GAGCACGCAG CGGGTGAACA CGTCGATGGC 14500
GACGGTCAGA TACGGGCGGC CAATTGGTTG CCGGTCGCGC TCGTCCACCA CGATCAGGTC GATGACCGTG TGGTCGATCT GTATCTGTTC CAGCGGCAAG 14600
GTGACTGCCG GCGGGACGCC GCCGACACCT TGCAGGTCGC GGGAGGCATC TTGTCCTTCC CGGCGGCGAG CGGTTTTGAG TGGATCGAGG GCAGCGATCC 14700
GCAGCGCCAC GGTGTTGCGC GCCGGCACCC GCAGTTTGTG CGTTTTGCAT ACCAGCGCAA CTTCGCGGTG AAACGCCGCC AGGCTGCGTT TCTGCTTGGT 14800
CAGGAAGCGC TTTTGCAGCA GCTCGCGGAT GATGCGCTCA ACAGACTCCG GCAAACGGCC CCTGCCTTTG CCGCCACCGG ATTGACCGGG TGCGAGGTCT 14900
GTCACAAGGC CGCTGCCCTG CCTGGCGCGG CGGATCAGGA CATACACCTG CCGCCGGGAC AGGCCAAGCG CCTGCGCTGC GGCATCGGCA GCCTGATGAC 15000
CGACTACTTC AAGCATCGCC AGCGGCGCGA TGATCTCGGC CCTGCGGCGG GCATGCTCCC ATGCCTCGTC GGACAGTGTA GCCACCCCGT GCTCGGTGAT 15100
TCGTGCGTCT GACGCCATGC CCATACCTCG CTTTTGGTGC ACACGAGTAT TGAGCATAGT CGAGATTGGT GAAGATGACT CCTGATATTG GGCTATCAGG 15200
AGCTGACTGC ACTCCGGGCG TTACGTCCAG TTAATTGGTG CAGTCGTCTT CTGAAAACGA CAGAGCCATT CCTCGATAGA GTTCGGCAAA ACCTTCGTTT 15300
TGTCGAACCA TTGCATCGCC CTTTGTGATT GGCGTATAAA CACACAAACA CCTATTAGCG GAGAACGCTA TGAATACCAT TCGCTGGAAT GTCGCCGTCT 15400
CGGCCGACAC CGACCAGTCG CTTCGGATGT TTCTGGCCAG CCAGGGCGGC GGCCGTAAGG GCGACCTGTC GCGCTTCATC GAAGAAGCGG TACGGGCACA 15500
CATCCTGGAG CTGAGCGCTG AGCAGGCCAA GGCCGCTAAC GCCCATCTGA GTGAGGCAGA ATTGACCAAC GCGGTTGACG AAGCGCTCGA CTGGGCACGT 15600
AAGCGCTGAT GCGGGTCGTG TTGGATACCA ACATCCTGTT CAGCGCCCTG ATCTCGCCAC ATGGCGCGCC CGATGCGATC TACCGTGCCT GGCGGGCGGC 15700
GCGTTTCGAG GTGGTGACCT CGCGGATGCA ACTCGATGAA ATTCGTCGAG CCAGCCGCTA TCCCAAGCTT CAGGCCATCC TACAGCCCGC CAAGGTGGGC 15800
GCCATGATCA ATAACCTGCA ACGGGCTGTG GTACTGGAGC GCCTGACCAT CGAGGTCGAA GCCGATGATC CGGATGACTC GTTTTTGCTG GCCATGGCCT 15900
TGGCGGGCGA TGCGGACTAC CTGATAACCG GTGATCGCCG CGCCGGCCTG CTGCAACGCG GGCACATCGA ACGACGCGGA TCGTCACGCC CGCCGTGTTC 16000
TGCGTCGAGG TGCTGTGATC AATGCCGGTC GGTTTTCTGA CTCAAGAGCA ACGCGACGGT TTTGGCCGCT ATGTTGATTC GCCCAGCCGT GAAGAGCTGG 16100
AACGTTACTT CCACCTGAGC GATGAAGACC GTGAAGCCAT CCAGGTGCTG CGGGGTAACC ATAACCGTCT GGGTTATGCC GTTCTGCTGA CCACCGTCCG 16200
CTTCGTTGGC GTTCTGCCGG ACAAGCCCGC CGCCGTGCCG GTGGAAGTCC TGCAGGTGCT TTGCCGACAA CTGGCGATTC CAGACCCCGA CTGCCTCCAG 16300
CGCTATAGCG ATCATCGCCG CTGGATACAT GCCACCGATA TTCAGAACCG CTTTGGCTAT CGTCATTTCA CCGATCCGGG CATCGGCTTT CGCTTGAGCC 16400
GCTGGCTGTA TGCCCTCTGC TGGACGGGCA CCGACCGGCC GGGAGTGCTG TTTGAGCGAG CCACCTCGTG GCTGTTCACA CAGAAAGTCC TCCTGCCTGG 16500
TGTGTCTCAA CTAGAGCGCT TTATCGCCCA GTTGCGCAGT CGGGTCGAAG AACGCCTCTG GTTTACGCTG GGCCGCAGCG TGACTGAGGA ACAGCGATTG 16600
CAACTGCAAG ACTTGCTGAC GGTGGCCGAA GGCAACCGCA GCTCCCGGCT GGATCAATTG CGCTCCGGCC CGGTCATGGT CAGTGGCCCC GCGTTGATTC 16700
GGGCACTGCG CCGGCTCGAT GACGTGCGCG GCATCGGCAT CACCTTGCCG GCGGCGGCGC ACATCCCTCC CAGCCGTATC GCCGCCCTGG CCCGCTTCGC 16800
CAACACGGCC AAGGTCACCG CGATTAATCG GCTGCCGGCG TCGCGGCGGA TGGCGACACT GGTGGCCTTC GCACTCTGCC TGGAGGCGAC TGCGCACGAC 16900
GACGCACTGG AAGTCCTGGA GGCCTTGCTG CGCGACCTGT TCAGCAACGC GGAGAAGGCC GACAAGAAAG CCCGCATGCG CAGCCTGAAA GACCTGGATC 17000
GGTCGGCCGC GACGCTCGCC GCCGCGTGCA AGGTCGTGCT GGACAGCTCG ATCAGCGATG ACAACGTGCG CGCCCGGCTG TTCAACGACC TGCCGAGGAC 17100
CACCCTGGAA AAGGCCCTGG AAGAGGTCAA CGCGCTGATC CGCCCGGTAG ATGACGTCTA TTTTCTTGCA TTGGAAGCGC GCTACCGCAG CGTGCGCCGC 17200
TTCCTGCCCG ACCTGCTCAA GCACATCCGC TTCGGCTTCA GCCCGGCCGG CAAGGGCGTG GCGGCTAGTC TGGAGTGGCT GCAACTGAAC CTGCCGCGCC 17300
GGAAGCCAGA GGATGACGCG CCGCAGGAGA TCGTGGCCAA GGCTTGGCAG AAGCACATCA CCCGCGAAGA TGGCTCCCTC GACATGGGTG CCTATGTGTT 17400
CTGCACGCTC GATGCGCTGC GCACGGCCCT GCGCCGCCGC GATGTCTTCG TCTCGCCCAG TTGGCGCTAT GCCGACCCGC GTCTTGGCCT GCTCGACGGT 17500
GCCGAATGGC TGGCGGCGCG ACCGATCATC TGCCGGTCAC TGGGCCTGAC CATCGACGCC AAAACCACCC TGGACGCCTT GTCCGTCGAG CTGGATGCAA 17600
CCTGGCTGGC AGTAGCCGCG CGCCTGCCCG ACAACCCGGC GATTCAACTG AGCGAGAACA CCGAGGGCAA GACCGAACTG TCGCTCGGGG CGCTGGACAA 17700
GCTGGACGAG CCCTGCTCGT TGCTGCAACT GCGGGCGGCC GTGTCTGACC TGATGCCGCG TGTCGATCTG CCGGAAATCC TCTTGGAAAT CGCCGCCCGC 17800
ACTGGCTTTT CCGAGGCCTT CACCCATGTC TCCGAACGCA ATGCACGCGC CGACAACCTG GTCACCAGCC TCTGCGCGGT GCTGTTGGGC GGGGCCTGCA 17900
ACACCGGCCT GGAGCCCTTG ATCCGCACCG ACAACCCGGC GCTGCGCCGT GACCGGCTGT CCTGGGTCAG CCAGAATTAT ATCCGCGACG ACACCCTGTC 18000
AGCGGCTAAC GCCATCCTGG TCGGAGCGCA AAGCCAACTG GAACTGGCCC AAGTCTGGGG TGGCGGCGAG GTCGCCTCCG CCGATGGCAT GCGCTTCGTC 18100
GTACCGGTGC GCACCGTGCA TGCCGGCCCC AATCCGAAGT ATTTCGGCAC CGGCCGGGGT GTCACCTGGT ACAACCTGAT TTCCGACCAA TTCTCCGGCC 18200
TCAACGCCAT CACCGTGCCC GGCACGCTGC GCGACAGCCT GGTGTTGCTG GCGGTCGTGC TGGAACAGCA GACCGAGTTG CAGCCGACGC AAATCATGAC 18300
CGACACCGGG GCCTACAGCG ATGTGGTGTT CGGGCTCTTC CGCCTACTTG GCTACCACTT CAGTCCGCGG CTGGCCGATG TCGGCGGTAC CCGCTTCTGG 18400
CGCACGCGCC CGGACGCGGA CTACGGCAAG CTCAACGGGC TGGCCCGCCA GTCGGTCAAA CTCGACCTGA TCGCCGAGCA CTGGGACGAC CTGCTGCGCC 18500
TGGCCGGCTC GCTCAAACTC GGCCGGGTGC CGGCGACTGG CATCATGCGC ACGCTGCAAA CGGGAGATAG ACCCACCCGG CTGGCCCAGG CGCTGGCCGA 18600
ATTCGGGCGG ATCGAAAAGA CTCTGCACAC GTTGACCTAT ATCGACGACG AGTCCAAGCG CCGCGCCACC CTGACCCAGT TGAACCGAGG CGAAGGCCGG 18700
CACAGCCTGG CCCGCGCCGT GTTCCACGGC AAACGCGGCG AGCTCCGCCA GCGCTACCGC GAAGGCCAGG AAGACCAGCT CGGTGCTCTG GGCCTGGTGG 18800
TGAACATCAT CGTGCTGTGG AACACCCTCT ACATGACGGC GGCCGTGGAA CGGCTCAAGC AGCACGGCTA TCCAGTGCTG GAAGAGGATT TGGCCCGGCT 18900
ATCGCCGCTG ATCTACGAGC ACATCAACAT GCTCGGGCGG TATTCCTTTG CGGTACCGGA AGAAGTTGCG CGCGGCGAGC TGCGGCCACT GCGTAATCCA 19000
GACGACGACC TGTGATCCCC CTAAACGCTA TGAGCAACAC CCAAGCTGCT GCTGGATCGG CGGGCACTTC ACCGAGCCGA ACGAACAGAA AACGCAGCAA 19100
TCCCCTGGGT TGGGGCGCAG CAGCGCCTTG CAGTTGCTGC ACTCGTAATA GAACTGGCAG GCGTCCGTGG GCATGGTTTC CGGCTTGGCG AAGCCGCAGC 19200
GCGGGCAAGT CAGCACGGAC TCAAGGACAA TGGCGCTCAT CGTGACCTCA CTTCTGCACT GTGGAGGGGT ATCCCGCGTT CGCGGTCGCC TCAGTCAGTG 19300
CCTCGGGCTG GGCCTTATCG GGATCGTAGG TGACGGTCGC CGTCTTCTGG TCGAAATTGA CCTGGACGTC ACTCACGCCG GACACCTTCT CCAGCGACTT 19400
CTTGACCGTG ATCGGACAGA GTCCGCACGT CATGTTCTGC ACGTCGAGCG TGACGGTTTT CGGGGGAGCC GCCAGCGCCA CGAAGGGCAA GGCGAAAAGC 19500
ACGGCGATCA GCAGTTTGCG CATGGTTAAT CTCCTTCAGT AGAACAGCGG GGCGAGCCAC GGCACGGCCA ATAGGCCGAG CAGCAGCACG CTGACGATCC 19600
AGAACACGAG TCGCTGTCGC ACGAGCGTGC GCGGATCGGC GCAGGGTGTA CCTGGCGTAC AAACCTGTGG CACCAGGTAG AGCTTGCGGA ATGCCAATCC 19700
CAGGAACAGT AGAGTCAACC CGATGAAGAG GGGGCGTAGT GGCTCCATCA TGGTCAGAGC GCCCACCCAC GTACCGCCGA CACCGAGTGC CAACAGCACC 19800
AGTGGCCCGA CACAGCACAC CGACGCACCG ATGGCGGTCA GCGAACTCGC GACCAGCGAG CCTTTCCCGG TGAGTTGCAT CCCCATTCCC ATCTCCTGAG 19900
CCTGATTGCC TAGGTGCTAT TCTAAACTCC GTACCAAAGT ACGGAATCAA GGAGAAAGTG ATGGCCACAG AGCTGACCAC TGGCAAGCTG GCAGACGCCG 20000
CCGGGGTGAA CGTCGAGACG ATCCGCTACT ACCAGCGACG CGGGCTGCTG GATGAACCAG CCAAACCCTT GGGTGGCCAT CGGCGCTATC CGGTGGACAT 20100
GGTGAAGCGA CTGCGTTTCA TCAAGCGGGC TCAGGCGCTG GGTTTCACGC TCTCGGAAGT CGGTGGACTG CTGACGCTGG ATGAGTCGTG CGCCTGTGCC 20200
GAAACGCGAG CACGGGCTGC ACGCAAGCTC GCGTTGATCG AGCAGAAGAT GGCCGACTTG GTCGTCATGC AGCAACTGTT AGGCGAACTG GTGCAGCAAT 20300
GTGATGCGGG AGACGGCGGA ACGATCTGCC CGATCATCGA GGCACTGATC AGAGAGTAAT GCCTGGCGGG TGAGCTGGAG ATCGGAAAGC CCCTTTACGG 20400
TGGGATTCAG AGCTTACGTT GGTTTTTGGT TCCATTGCTC CCCAAACCCC

 Recombination Sites     

Name Coordinates Gene Sequence
res_site_III 985-1026 42 ACTCGACTAC GTTAGTAATA GTTGAACTTT GATTAAGCGT AC
res_site_II 1029-1059 31 GTTATTTGAA CCGTAGCGCG GGGAGCTTAA C
attI 2366-2421 56 TGATGTTATG GAGCAGCAAC GATGTTACGC AGCAGGGCAG TCGCCCTAAA ACAAAG
attC Sat-2 core 2959-3018 60 GCCTAACAAT TCGTCCAAGC CGACGCCGCT TCGCGGCGCG GCTTAACTCA GGTGTTAAAC
attC ANT(3'')-IIa core 3815-3868 54 GTCTAACAAT TCGTTCAAGC CGACGCCGCT TCGCGGCGCG GCTTACCTTG GCCG
attC Sat-2 core 4406-4465 60 GCCTAACAAT TCGTCCAAGC CGACGCCGCT TCGCGGCGCG GCTTAACTCA GGTGTTAAAC
attC ANT(3'')-IIa core 5262-5315 54 GTCTAACAAT TCGTTCAAGC CGACGCCGCT TCGCGGCGCG GCTTACCTTG GCCG
attC qacH_sul1 core 6599-6632 34 GCCTAGCATT CACCTTCCGG CCGCCCGCTA GCGG
r1 11263-11276 14 CCGTCACGTA TACG
r2 11279-11292 14 CGATTATGTG ACAG
r3 11323-11336 14 TTGTCACTTA ACCC
r5 11379-11392 14 ATGTGACAGA AATT
res_site_I 15281-15308 28 GTTCGGCAAA ACCTTCGTTT TGTCGAAC

 ORFs     
ORF Summary
Gene Name Associated TE Coordinates Class Sub Class Orientation
tnpR Tn1412 41-970 Accessory Gene Resolvase -
intI1 In32 1272-2285 Integron Integrase Class 1 -
ANT(2'')-Ia (ARO:3000230) In32 2431-2964 Passenger Gene Antibiotic Resistance +
aadA (ARO:3002601) In32 3022-3813 Passenger Gene Antibiotic Resistance +
ANT(2'')-Ia (ARO:3000230) In32 3878-4411 Passenger Gene Antibiotic Resistance +
aadA (ARO:3002601) In32 4469-5260 Passenger Gene Antibiotic Resistance +
qacEdelta1 (ARO:3005010) In32 5424-5771 Passenger Gene Antibiotic Resistance +
sul1 (ARO:3000410) In32 5765-6604 Passenger Gene Antibiotic Resistance +
bla LCR-1 (ARO:3002997) In32 7158-7940 Passenger Gene Antibiotic Resistance +
tnpA IS26 8246-8950 Transposase   +
APH(3')-Ia (ARO:3002641) Tn4352 9140-9955 Passenger Gene Antibiotic Resistance -
tnpA IS26 10106-10810 Transposase   +
tniQ In32 11316-12621 Accessory Gene Target Site Selection -
tniB In32 12618-13439 Accessory Gene   -
tniA In32 13442-15157 Transposase   -
RHH_6 Tn1412 15370-15609 Passenger Gene Antitoxin +
PIN_3 Tn1412 15609-16040 Passenger Gene Toxin +
tnpA Tn1412 16022-19015 Transposase   +
merP Tn1412 19248-19523 Passenger Gene Heavy Metal Resistance -
merT Tn1412 19536-19892 Passenger Gene Heavy Metal Resistance -
merR Tn1412 19961-20359 Passenger Gene Heavy Metal Resistance +

ORF Details
Gene Name Protein Name Associated TE Gene Length Coordinates Strand
tnpR TnpR Tn1412 930 41-970 -
Class:   Accessory Gene
Sub Class:   Resolvase
Transpoase Chemistry:   Serine
Sequence Family:  Serine Site-Specific Recombinase
Protein Sequence:  
MKIGYARVST RDQKADLQVD ALKQAGCERI YQDIASGAKS ARPELDKLLA NVRPGDAVVI WKLDRLGRSL KHLVELVGEL AERKVGLQSL NDPIDTTHAQ
GRLVFNLFAS LAEFERELIR ERTQAGLSAA RARGRIGGRP KGLPAKAEAT AMAAETLYRE GRLSVSAIGE KLHISKSTLY SYLRHRGVEI GAYQKSARSR
DQHASAASPA EPPAAERVAT VTLRLAVVNN SKFVRGRKRA TENIERYCLE PYGMKRLDAG HYELTIPYRS DDELDKSVHD LLTEISQEAD MRNCFVEMGA
WEEDTEKRW

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
intI1 IntI1 In32 1014 1272-2285 -
Class:   Integron Integrase
Sub Class:   Class 1
Transpoase Chemistry:   Tyrosine
Sequence Family:  Class 1 Integron Tyrosine Integrase
Protein Sequence:  
MKTATAPLPP LRSVKVLDQL RERIRYLHYS LRTEQAYVHW VRAFIRFHGV RHPATLGSSE VEAFLSWLAN ERKVSVSTHR QALAALLFFY GKVLCTDLPW
LQEIGRPRPS RRLPVVLTPD EVVRILGFLE GEHRLFAQLL YGTGMRISEG LQLRVKDLDF DHGTIIVREG KGSKDRALML PESLAPSLRE QLSRARAWWL
KDQAEGRSGV ALPDALERKY PRAGHSWPWF WVFAQHTHST DPRSGVVRRH HMYDQTFQRA FKRAVEQAGI TKPATPHTLR HSFATALLRS GYDIRTVQDL
LGHSDVSTTM IYTHVLKVGG AGVRSPLDAL PPLTSER

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
ANT(2'')-Ia (ARO:3000230) ANT(2'')-Ia In32 534 2431-2964 +
Class:   Passenger Gene
Sub Class:   Antibiotic Resistance
Function:   antibiotic inactivation (ARO:0001004)
Target:   aminoglycoside antibiotic (ARO:0000016)
Sequence Family:  ANT(2'') (ARO:3004276)
Comment:   perfect match to reference sequence for ARO:3000230||Synonym
Protein Sequence:  
MDTTQVTLIH KILAAADERN LPLWIGGGWA IDARLGRVTR KHDDIDLTFP GERRGELEAI VEMLGGRVME ELDYGFLAEI GDELLDCEPA WWADEAYEIA
EAPQGSCPEA AEGVIAGRPV RCNSWEAIIW DYFYYADEVP PVDWPTKHIE SYRLACTSLG AEKVEVLRAA FRSRYAA

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
aadA (ARO:3002601) AadA In32 792 3022-3813 +
Class:   Passenger Gene
Sub Class:   Antibiotic Resistance
Function:   antibiotic inactivation (ARO:0001004)
Transpoase Chemistry:   aminoglycoside nucleotidyltransferase
Target:   aminoglycoside antibiotic (ARO:0000016)
Sequence Family:  ANT(3'') (ARO:3004275)
Comment:   perfect match to reference sequence for ARO:3002601||Synonyms: aadA1-pm, aadA, aadA1, aad(3'')(9)
Protein Sequence:  
MREAVIAEVS TQLSEVVGVI ERHLEPTLLA VHLYGSAVDG GLKPHSDIDL LVTVTVRLDE TTRRALINDL LETSASPGES EILRAVEVTI VVHDDIIPWR
YPAKRELQFG EWQRNDILAG IFEPATIDID LAILLTKARE HSVALVGPAA EELFDPVPEQ DLFEALNETL TLWNSPPDWA GDERNVVLTL SRIWYSAVTG
KIAPKDVAAD WAMERLPAQY QPVILEARQA YLGQEEDRLA SRADQLEEFV HYVKGEITKV VGK

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
ANT(2'')-Ia (ARO:3000230) ANT(2'')-Ia In32 534 3878-4411 +
Class:   Passenger Gene
Sub Class:   Antibiotic Resistance
Function:   antibiotic inactivation (ARO:0001004)
Target:   aminoglycoside antibiotic (ARO:0000016)
Sequence Family:  ANT(2'') (ARO:3004276)
Comment:   perfect match to reference sequence for ARO:3000230||Synonym
Protein Sequence:  
MDTTQVTLIH KILAAADERN LPLWIGGGWA IDARLGRVTR KHDDIDLTFP GERRGELEAI VEMLGGRVME ELDYGFLAEI GDELLDCEPA WWADEAYEIA
EAPQGSCPEA AEGVIAGRPV RCNSWEAIIW DYFYYADEVP PVDWPTKHIE SYRLACTSLG AEKVEVLRAA FRSRYAA

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
aadA (ARO:3002601) AadA In32 792 4469-5260 +
Class:   Passenger Gene
Sub Class:   Antibiotic Resistance
Function:   antibiotic inactivation (ARO:0001004)
Transpoase Chemistry:   aminoglycoside nucleotidyltransferase
Target:   aminoglycoside antibiotic (ARO:0000016)
Sequence Family:  ANT(3'') (ARO:3004275)
Comment:   perfect match to reference sequence for ARO:3002601||Synonyms: aadA1-pm, aadA, aadA1, aad(3'')(9)
Protein Sequence:  
MREAVIAEVS TQLSEVVGVI ERHLEPTLLA VHLYGSAVDG GLKPHSDIDL LVTVTVRLDE TTRRALINDL LETSASPGES EILRAVEVTI VVHDDIIPWR
YPAKRELQFG EWQRNDILAG IFEPATIDID LAILLTKARE HSVALVGPAA EELFDPVPEQ DLFEALNETL TLWNSPPDWA GDERNVVLTL SRIWYSAVTG
KIAPKDVAAD WAMERLPAQY QPVILEARQA YLGQEEDRLA SRADQLEEFV HYVKGEITKV VGK

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
qacEdelta1 (ARO:3005010) QacEdelta1 In32 348 5424-5771 +
Class:   Passenger Gene
Sub Class:   Antibiotic Resistance
Function:   antibiotic efflux (ARO:0010000)
Target:   acridine dye (ARO:3000054)||quaternary ammonium salts
Sequence Family:  major facilitator superfamily (MFS) antibiotic efflux pump (ARO:0010002)
Comment:   subunit of the qac multidrug efflux pump||perfect match to reference sequence for ARO:3005010 (bitscore:219)
Protein Sequence:  
MKGWLFLVIA IVGEVIATSA LKSSEGFTKL APSAVVIIGY GIAFYFLSLV LKSIPVGVAY AVWSGLGVVI ITAIAWLLHG QKLDAWGFVG MGLIIAAFLL
ARSPSWKSLR RPTPW

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
sul1 (ARO:3000410) Sul1 In32 840 5765-6604 +
Class:   Passenger Gene
Sub Class:   Antibiotic Resistance
Function:   antibiotic target replacement (ARO:0001002)
Transpoase Chemistry:   dihydropteroate synthase
Target:   sulfonamide antibiotic (ARO:3000282)||sulfone antibiotic (ARO:3003401)
Sequence Family:  sulfonamide resistant sul (ARO:3004238)
Comment:   perfect match to reference sequence for ARO:3000410
Protein Sequence:  
MVTVFGILNL TEDSFFDESR RLDPAGAVTA AIEMLRVGSD VVDVGPAASH PDARPVSPAD EIRRIAPLLD ALSDQMHRVS IDSFQPETQR YALKRGVGYL
NDIQGFPDPA LYPDIAEADC RLVVMHSAQR DGIATRTGHL RPEDALDEIV RFFEARVSAL RRSGVAADRL ILDPGMGFFL SPAPETSLHV LSNLQKLKSA
LGLPLLVSVS RKSFLGATVG LPVKDLGPAS LAAELHAIGN GADYVRTHAP GDLRSAITFS ETLAKFRSRD ARDRGLDHA

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
bla LCR-1 (ARO:3002997) Bla LCR-1 In32 783 7158-7940 +
Class:   Passenger Gene
Sub Class:   Antibiotic Resistance
Function:   antibiotic inactivation (ARO:0001004)
Target:   penam (ARO:3000008)||cephalosporin (ARO:0000032)
Sequence Family:  LCR beta-lactamase (ARO:3002996)
Comment:   perfect match to reference sequence for ARO:3002996
Protein Sequence:  
MLKSTLLAFG LFIALSARAE NQAIAKLFLR AGVDGTIVIE SLTTGQRLVH NDPRAQQRYP AASTFKVLNT LIALEEGAIS GENQIFHWNG TQYSIANWNQ
DQTLDSAFKV SCVWCYQQIA LRVGALKYPA YIQQTNYGHL LEPFNGTEFW LDGSLTISAE EQVAFLRQVV ERKLPFKASS YDSLKKVMFA DENAQYRLYA
KTGWATRMTP SVGWYVGYVE AKDDVWLFAL NLATRDANDL PLRTQIAKDA LKAIGAFPTK

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
tnpA TnpA IS26 705 8246-8950 +
Class:   Transposase
Transpoase Chemistry:   DDE
Protein Sequence:  
MNPFKGRHFQ RDIILWAVRW YCKYGISYRE LQEMLAERGV NVDHSTIYRW VQRYAPEMEK RLRWYWRNPS DLCPWHMDET YVKVNGRWAY LYRAVDSRGR
TVDFYLSSRR NSKAAYRFLG KILNNVKKWQ IPRFINTDKA PAYGRALALL KREGRCPSDV EHRQIKYRNN VIECDHGKLK RIIGATLGFK SMKTAYATIK
GIEVMRALRK GQASAFYYGD PLGEMRLVSR VFEM

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
APH(3')-Ia (ARO:3002641) APH(3')-Ia Tn4352 816 9140-9955 -
Class:   Passenger Gene
Sub Class:   Antibiotic Resistance
Function:   antibiotic inactivation (ARO:0001004)
Target:   aminoglycoside antibiotic (ARO:0000016)
Sequence Family:  APH(3') (ARO:3000126)
Comment:   strict match to reference sequence for ARO:3002641 (bitscore: 560)||Synonyms: aphA-1, apha1-1AB, APH(3')-Ic, apha7
Protein Sequence:  
MSHIQRETSC SRPRLNSNMD ADLYGYKWAR DNVGQSGATI YRLYGKPDAP ELFLKHGKGS VANDVTDEMV RLNWLTEFMP LPTIKHFIRT PDDAWLLTTA
IPGKTAFQVL EEYPDSGENI VDALAVFLRR LHSIPVCNCP FNSDRVFRLA QAQSRMNNGL VDASDFDDER NGWPVEQVWK EMHKLLPFSP DSVVTHGDFS
LDNLIFDEGK LIGCIDVGRV GIADRYQDLA ILWNCLGEFS PSLQKRLFQK YGIDNPDMNK LQFHLMLDEF F

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
tnpA TnpA IS26 705 10106-10810 +
Class:   Transposase
Transpoase Chemistry:   DDE
Protein Sequence:  
MNPFKGRHFQ RDIILWAVRW YCKYGISYRE LQEMLAERGV NVDHSTIYRW VQRYAPEMEK RLRWYWRNPS DLCPWHMDET YVKVNGRWAY LYRAVDSRGR
TVDFYLSSRR NSKAAYRFLG KILNNVKKWQ IPRFINTDKA PAYGRALALL KREGRCPSDV EHRQIKYRNN VIECDHGKLK RIIGATLGFK SMKTAYATIK
GIEVMRALRK GQASAFYYGD PLGEMRLVSR VFEM

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
tniQ TniQ In32 1306 11316-12621 -
Class:   Accessory Gene
Sub Class:   Target Site Selection
Protein Sequence:  
VRKRSTTARS AWPITPVPAS GVGSSSGN*C EASSTLAAAS GSQGRRSLIL VAQSCRRLLP DGYA*LVGTR SWA*QGR*PG HRTAAVAADG TLPAKRHRAG
PTALHEFCRL GAMAAG*PR* PGSVRPGNLC VPVLGNAAKT QPQDEIGHEL ARVAAQSANP SGLPTLPE*F SEPGGTARVE ATPDAELSPA WMLAGIVLGP
ARACAWLGEG RRCPAHGQ*R DCDDGPAHLA STDSRIRRVA APARPCRFVV PAAAYTAG*A EYPALALRDL RWQYPLCLGA LRPSAARRAK SVASLRDSGL
IGAVADIGGS GNRHRPDRIE GVESTRRTGN AVPVRATN*V HQRPASG*AE EGTRQLLATS PQSNQRCHYR SAARLRDSPL VIRDGILWTA *P*IPGAFAR
HLYQGGHSP* ISVTL*ARRP LYMP*TK*RV K*QIL

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
tniB TniB In32 822 12618-13439 -
Class:   Accessory Gene
Transpoase Chemistry:   Serine
Comment:   homologous to TnsC protein of Tn7 putative ATP-binding protein
Protein Sequence:  
VDEYPIIDLS HLLPTAQGLA RLPADERIQR LRADRWIGYP RAVEALNRLE TLYAWPNKQR MPNLLLVGPT NNGKSMIVEK FRRTHPASAD ADQEHIPVLV
VQMPSEPSVI RFYVALLAAM GAPLRPRPRL PEMEQLALAL LRKVGVRMLV IDELHNVLAG NSVNRREFLN LLRFLGNELR IPLVGVGTRD AYLAIRSDDQ
LENRFEPMML PVWEANDDCC SLLASFAASL PLRRPSSIAT LDMARYLLTR SEGTIGELAH LLMAAAIAAC GER

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
tniA TniA In32 1716 13442-15157 -
Class:   Transposase
Function:   transposase
Transpoase Chemistry:   DDE
Protein Sequence:  
MLNTRVHQKR GMGMASDARI TEHGVATLSD EAWEHARRRA EIIAPLAMLE VVGHQAADAA AQALGLSRRQ VYVLIRRARQ GSGLVTDLAP GQSGGGKGRG
RLPESVERII RELLQKRFLT KQKRSLAAFH REVALVCKTH KLRVPARNTV ALRIAALDPL KTARRREGQD ASRDLQGVGG VPPAVTLPLE QIQIDHTVID
LIVVDERDRQ PIGRPYLTVA IDVFTRCVLG MVVTLEAPSA VSVGLCLVHV ACDKRPWLEG LNVEMDWPMS GKPKLLYLDN AAEFKSEALR RGCEQHGIQL
DYRPPGQPHY GGIVERIIGT AMQMIHDELP GTTFSNPDQR GDYDSENKAA LTLHELERWL TLAVGTYHGS VHNGLLQPPV ARWSEAVTRV GVPAVVTRAT
AFLVDFLPII RRTLTRTGFV IDHIHYYADT LKPWIARRDR WPAFLIRRDP RDISRIWVLE PEGQHYLEIP YRTLSHPAVT LWEQRQALTK LRQQGREQVD
ESALFRMIGQ MREIVTTAQK ATRKARRDAD RRQHLKASVP PDKPTPPETD VADPQADNLP PAKPFDQIEE W

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
RHH_6 RHH_6 Tn1412 240 15370-15609 +
Class:   Passenger Gene
Sub Class:   Antitoxin
Function:   antitoxin; binds to DNA(IPR031914)
Sequence Family:  RHH_6 (Pfam:PF16762)
Comment:   Pfam PF16762.4
Protein Sequence:  
MNTIRWNVAV SADTDQSLRM FLASQGGGRK GDLSRFIEEA VRAHILELSA EQAKAANAHL SEAELTNAVD EALDWARKR

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
PIN_3 PIN_3 Tn1412 432 15609-16040 +
Class:   Passenger Gene
Sub Class:   Toxin
Function:   toxin; ribonuclease activity(IPR002716)
Target:   single stranded RNA
Sequence Family:  PIN_3 (Pfam:PF13470)
Protein Sequence:  
MRVVLDTNIL FSALISPHGA PDAIYRAWRA ARFEVVTSRM QLDEIRRASR YPKLQAILQP AKVGAMINNL QRAVVLERLT IEVEADDPDD SFLLAMALAG
DADYLITGDR RAGLLQRGHI ERRGSSRPPC SASRCCDQCR SVF

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
tnpA TnpA Tn1412 2994 16022-19015 +
Class:   Transposase
Transpoase Chemistry:   DDE
Protein Sequence:  
MPVGFLTQEQ RDGFGRYVDS PSREELERYF HLSDEDREAI QVLRGNHNRL GYAVLLTTVR FVGVLPDKPA AVPVEVLQVL CRQLAIPDPD CLQRYSDHRR
WIHATDIQNR FGYRHFTDPG IGFRLSRWLY ALCWTGTDRP GVLFERATSW LFTQKVLLPG VSQLERFIAQ LRSRVEERLW FTLGRSVTEE QRLQLQDLLT
VAEGNRSSRL DQLRSGPVMV SGPALIRALR RLDDVRGIGI TLPAAAHIPP SRIAALARFA NTAKVTAINR LPASRRMATL VAFALCLEAT AHDDALEVLE
ALLRDLFSNA EKADKKARMR SLKDLDRSAA TLAAACKVVL DSSISDDNVR ARLFNDLPRT TLEKALEEVN ALIRPVDDVY FLALEARYRS VRRFLPDLLK
HIRFGFSPAG KGVAASLEWL QLNLPRRKPE DDAPQEIVAK AWQKHITRED GSLDMGAYVF CTLDALRTAL RRRDVFVSPS WRYADPRLGL LDGAEWLAAR
PIICRSLGLT IDAKTTLDAL SVELDATWLA VAARLPDNPA IQLSENTEGK TELSLGALDK LDEPCSLLQL RAAVSDLMPR VDLPEILLEI AARTGFSEAF
THVSERNARA DNLVTSLCAV LLGGACNTGL EPLIRTDNPA LRRDRLSWVS QNYIRDDTLS AANAILVGAQ SQLELAQVWG GGEVASADGM RFVVPVRTVH
AGPNPKYFGT GRGVTWYNLI SDQFSGLNAI TVPGTLRDSL VLLAVVLEQQ TELQPTQIMT DTGAYSDVVF GLFRLLGYHF SPRLADVGGT RFWRTRPDAD
YGKLNGLARQ SVKLDLIAEH WDDLLRLAGS LKLGRVPATG IMRTLQTGDR PTRLAQALAE FGRIEKTLHT LTYIDDESKR RATLTQLNRG EGRHSLARAV
FHGKRGELRQ RYREGQEDQL GALGLVVNII VLWNTLYMTA AVERLKQHGY PVLEEDLARL SPLIYEHINM LGRYSFAVPE EVARGELRPL RNPDDDL

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
merP MerP Tn1412 276 19248-19523 -
Class:   Passenger Gene
Sub Class:   Heavy Metal Resistance
Target:   Mercury
Comment:   periplasmic binding protein
Protein Sequence:  
MRKLLIAVLF ALPFVALAAP PKTVTLDVQN MTCGLCPITV KKSLEKVSGV SDVQVNFDQK TATVTYDPDK AQPEALTEAT ANAGYPSTVQ K

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
merT MerT Tn1412 357 19536-19892 -
Class:   Passenger Gene
Sub Class:   Heavy Metal Resistance
Target:   Mercury
Comment:   transport protein
Protein Sequence:  
MGMGMQLTGK GSLVASSLTA IGASVCCVGP LVLLALGVGG TWVGALTMME PLRPLFIGLT LLFLGLAFRK LYLVPQVCTP GTPCADPRTL VRQRLVFWIV
SVLLLGLLAV PWLAPLFY

Gene Name Protein Name Associated TE Gene Length Coordinates Strand
merR MerR Tn1412 399 19961-20359 +
Class:   Passenger Gene
Sub Class:   Heavy Metal Resistance
Target:   Mercury
Comment:   regulatory protein
Protein Sequence:  
MATELTTGKL ADAAGVNVET IRYYQRRGLL DEPAKPLGGH RRYPVDMVKR LRFIKRAQAL GFTLSEVGGL LTLDESCACA ETRARAARKL ALIEQKMADL
VVMQQLLGEL VQQCDAGDGG TICPIIEALI RE

 Internal Transposable Elements (TE)     

TnCentral Accession TE Name Type Coordinates Length
In32-L36547 In32 Integron 1070-15262 14193
Tn4352-M20306 Tn4352 Transposon 8183-10862 2680
IS26-MH257753 IS26 Insertion Sequence 8183-9002 820
IS26-MH257753 IS26 Insertion Sequence 10043-10862 820

 Internal Repeat Elements     

Name Associated Mobile Element Coordinates Sequence (Top Strand)
IRi In32 1070-1102 TGTCGTTTTC AGAAGACGGC TGCACTGAAC GTC
repeat i1 In32 1078-1096 TCAGAAGACG GCTGCACTG
repeat i2 In32 1101-1119 TCAGAAGCCG ACTGCACTA
repeat i3 In32 1143-1161 TCAGGCAACG ACGGGCTGC
repeat i4 In32 1171-1189 TCAGCGGACG CAGGGAGGA
IRi Tn402 6981-7013 TGTCGTTTTC AGAAGACGGC TGCACTGAAC GTC
IRi In32 6981-7013 TGTCGTTTTC AGAAGACGGC TGCACTGAAC GTC
repeat i1 In32 6989-7007 TCAGAAGACG GCTGCACTG
repeat i2 In32 7012-7030 TCAGAAGCCG ACTGCACTA
repeat i3 In32 7054-7072 TCAGGCAACG ACGGGCTGC
IR IS26 8183-8196 GGCACTGTTG CAAA
IR IS26 8989-9002 AAACGTTGTC ACGG
IR IS26 10043-10056 GGCACTGTTG CAAA
IR IS26 10849-10862 AAACGTTGTC ACGG
repeat t4 In32 15135-15153 ACCACGTGTG CTCATAACT
repeat t1 In32 15236-15254 ACCACGTCAG CAGAAGACT
IRt In32 15238-15262 CACGTCAGCA GAAGACTTTT GCTGT

 References     

1.Partridge SR, Recchia GD, Stokes HW, Hall RM. Family of class 1 integrons related to In4 from Tn1696. Antimicrob Agents Chemother. 2001 Nov;45(11):3014-20. doi: 10.1128/AAC.45.11.3014-3020.2001. PubMed ID: 11600350