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Recombination Sites | |
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Internal Transposable Elements | |
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Internal Repeats | |
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References | |
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| Name: ISPa96 |
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| Family: IS5 Group: IS5 |
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| Evidence of Transposition: yes |
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| Host |
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| Host Organism: | Pseudomonas aeruginosa MRSN12280 | | |
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| Map |
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| Terminal Inverted Repeats (IR) |
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| IRL (Length: 16 bp) |  | GGAAGGTCTGCACAAA |
| IRR (Length: 16 bp) | | GGAAGGTCTGCACAAA |
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| Sequence |
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--------10 --------20 --------30 --------40 --------50 --------60 --------70 --------80 --------90 -------100
GGAAGGTCTG CACAAATGGG GCCCCGCCGT GCTTGGCAAG TGCGTGAGCT GCTGAGACCA TATCGCCCAT GAAGCAACAC AGCCTGGGCC TGGGGATGAC 100
GGCCAAGCGC ACGCGGCGGC GCGAGTTTCT GGAAGAGATG GAACGCGTGG TGCCCTGGGC CGACTTGGTG GCGCTGGTGT CGCCCTACCT GCCCGAGGGC 200
CGGCGCGGAC GTCCGCCGTT TGCCCCGGAG ACCATGCTGC GCATCCACTT CATGCAGCAG TGGTTCAACC TGAGCGACCC GGCCATGGAA GAGGCGCTGC 300
ACGACGTGCC GCTGTTCCGC GAGTTCGCCG GGCTGGAAGG CTGGGAAGAA CGGCTGCCCG ACGAGAGCAC CATCCTGAGG TTCCGCCACG TGCTCGAACA 400
GCACCAGCTG GCCGCCCAGA TCCTGAAGAC CGTCAACGAC CTGCTGGGCG CCAAGGGGCT GCTGCTCAGG AGCGGCACGG TGGTCGATGC CACACTCATC 500
GCAGCCCCGA GCTCCACCAA GAACGCCTCG GGGCAGCGTG ATCCCGAGAT GAAGCAAAGC CGCAAGGGCC AGCAGTGGTA CTTCGGCATG AAGTGCCACA 600
TCGGCGTGGA TGCCGACTCG GGCCTGGTGC ACACCGTGCG CGGCACTGGC GGGCACGTCA ACGACGTGGT CGAGGCCGCC AGCCTGCTGC ACGGACAGGA 700
GCGCGACGTG TTTGCCGATG CGGGCTACCA GGGTGCGGGC AAACGAGCCG ACGCCCCGCC CGGAGTGCAG TGGCACATCG CCATGAAGCC GGGGCAGCGC 800
CGGGTGCTGG ATCCGGCCGA TCCCATAGAG GGGCTGACCG AGCAGCTCGA GCGGCTGAAG GCGCGCATCC GGGCCAAGGT GGAACATCCC TTCCGGGTGG 900
TCAAGCGCCA GTTCGGGCAT GTGAAGGTGC GCTACCGGGG TTTGGCCAAG AACACGGCGC AGCTGCACAC GCTGTTTGCG CTGGCCAACC TGTGGCTGGC 1000
GCGCCGCCAA CTCCTGGGAG CGGGGGCATG AGTGCGCCCG AAATGGGCCT GCGGGGCCGC CACGGCCACC GAATCGGCGG GAGTGTCGGT GCATTTGGGC 1100
CGAAGGGGGC ATCGCAGACA TTCGATTTCG AGTCACTCGG GGCGCAGGCA CGGTTCAGGG TGCTTTGTGC AGACCTTCC
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| ORFs |
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| Gene Name |
Associated TE |
Coordinates |
Class |
Sub Class |
Orientation |
| tnp |
ISPa96 |
69-1031 |
Transposase |
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| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| tnp |
Tnp |
ISPa96 |
963 |
69-1031 |
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| Class: | Transposase |
| Transpoase Chemistry: | DDE |
Protein Sequence:
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MKQHSLGLGM TAKRTRRREF LEEMERVVPW ADLVALVSPY LPEGRRGRPP FAPETMLRIH FMQQWFNLSD PAMEEALHDV PLFREFAGLE GWEERLPDES
TILRFRHVLE QHQLAAQILK TVNDLLGAKG LLLRSGTVVD ATLIAAPSST KNASGQRDPE MKQSRKGQQW YFGMKCHIGV DADSGLVHTV RGTGGHVNDV
VEAASLLHGQ ERDVFADAGY QGAGKRADAP PGVQWHIAMK PGQRRVLDPA DPIEGLTEQL ERLKARIRAK VEHPFRVVKR QFGHVKVRYR GLAKNTAQLH
TLFALANLWL ARRQLLGAGA
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