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Recombination Sites | |
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Internal Transposable Elements | |
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Internal Repeats | |
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References | |
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| Name: IS4321 |
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| Family: IS110 Group: IS1111 |
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| Evidence of Transposition: yes |
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| Map |
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| Terminal Inverted Repeats (IR) |
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| IRL (Length: 19 bp) |  | TAATGAGATGGTCACTCCC |
| IRR (Length: 15 bp) | | TCTATGGTCACTCCC |
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| Sequence |
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--------10 --------20 --------30 --------40 --------50 --------60 --------70 --------80 --------90 -------100
TAATGAGATG GTCACTCCCT CCTTCCCGGT ACTATGCTGA GGACAGGCTT TCATTCGGAG AACTATCATG GAAAACATTG CGCTCATTGG TATCGATCTG 100
GGTAAAAACT CTTTCCATAT TCATTGCCAG GATCGTCGCG GGAAGGCTGT TTACCGTAAA AAATTTACCC GGCCAAAGTT GATCGAATTT TTGGCGACAT 200
GCCCCGCTAC AACCATCGCA ATGGAAGCCT GTGGCGGTTC TCACTTTATG GCACGCAAGT TGGAAGAGTT GGGGCATTCC CCAAAGCTGA TATCACCACA 300
ATTTGTCCGC CCGTTCGTTA AAAGCAATAA AAACGACTTT GTCGACGCCG AAGCTATTTG TGAAGCTGCA TCGCGTCCGT CTATGCGTTT TGTGCAGCCC 400
AGAACGGAAT CTCAGCAGGC AATGCGGGCT CTGCATCGTG TCCGTGAATC CCTGGTTCAG GATAAGGTAA AAACAACCAA TCAAATGCAT GCTTTTCTGC 500
TGGAATTTGG CATTAGCGTT CCCCGAGGAG CTGCCGTTAT TAGCCGACTG AGTACCATTC TTGAGGATAA TAGTTTGCCT CTTTACCTCA GCCAGTTATT 600
GCTGAAATTA CAACAGCATT ATCACTATCT TGTGGAGCAG ATTAAAGATT TGGAATCCCA GTTGAAACGA AAGTTGGACG AAGATGAGGT TGGACAGCGC 700
TTGCTGAGCA TTCCCTGCGT CGGAACACTG ACAGCGAGTA CTATTTCAAC TGAGATTGGC GACGGGAAGC AGTACGCCAG CAGCCGTGAC TTTGCGGCGG 800
CAACAGGGCT TGTACCTCGG CAGTACAGCA CGGGAGGTAG GACGACATTG CTGGGAATTA GTAAGCGAGG TAATAAAAAG ATCCGAACTT TGTTGGTTCA 900
ATGTGCCAGG GTATTCATAC AAAAACTGGA ACACCAGTCT GGCAAATTGG CCGATTGGGT CAGGGATTTA CTGTGCCGGA AAAGCAACTT TGTCGTCACT 1000
TGTGCTCTGG CAAACAAGCT GGCCAGAATA GCCTGGGCCC TAACGGCACG ACAGCAAACT TATGTAGCAT AACGGCAGAA ATACACCGGT TTAAAGAATT 1100
ACTGATCTGG TTTTGCGAAT ACTGATATTG ATGATACTAA CGGCCCACCG GCCTGTTGAG GAACCTGTAA AACGGAAAGG CTCATTGAAG CCGTATATTT 1200
TCTGGAGGTT CATCAGGCGC GGAACTCATC AAGGCGCGGG AATAAAATCC CATTCAGACG CCGGATAGAT TCAAGCAAGC CAACTTGTCG TCAAAATCGG 1300
TGTTGCAAAA ACGGGAGTGA CCATAGA
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| ORFs |
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| Gene Name |
Associated TE |
Coordinates |
Class |
Sub Class |
Orientation |
| tnp |
IS4321 |
68-1072 |
Transposase |
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| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| tnp |
Tnp |
IS4321 |
1005 |
68-1072 |
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| Class: | Transposase |
| Transpoase Chemistry: | DEDD |
Protein Sequence:
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MENIALIGID LGKNSFHIHC QDRRGKAVYR KKFTRPKLIE FLATCPATTI AMEACGGSHF MARKLEELGH SPKLISPQFV RPFVKSNKND FVDAEAICEA
ASRPSMRFVQ PRTESQQAMR ALHRVRESLV QDKVKTTNQM HAFLLEFGIS VPRGAAVISR LSTILEDNSL PLYLSQLLLK LQQHYHYLVE QIKDLESQLK
RKLDEDEVGQ RLLSIPCVGT LTASTISTEI GDGKQYASSR DFAAATGLVP RQYSTGGRTT LLGISKRGNK KIRTLLVQCA RVFIQKLEHQ SGKLADWVRD
LLCRKSNFVV TCALANKLAR IAWALTARQQ TYVA
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