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Recombination Sites | |
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Internal Transposable Elements | |
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Internal Repeats | |
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References | |
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Name: IS1251 |
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Family: ISL3 |
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Evidence of Transposition: no |
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Map |
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Terminal Inverted Repeats (IR) |
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IRL (Length: 24 bp) | | GGCTCTATACTTTTTGATGTTGGT |
IRR (Length: 24 bp) | | GGCTCTTTGTCAAATGATGTTGGT |
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Sequence |
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--------10 --------20 --------30 --------40 --------50 --------60 --------70 --------80 --------90 -------100
GGCTCTATAC TTTTTGATGT TGGTGGATGA CACCAGCATC TTTTTTATTT TCCAAAACAT ATAGAAAAGA CACCTTGAAA TCCTTTAGAA TTAATTTGGC 100
GAACCAACCC AAAAGGAGGA ATCAAGATGT CTTACACTCA CCTTATCAAA GAAACATTAG ATATTCTAGA CTTATCAGTT ACTTTTAACG AAAATTGTCT 200
CACAAAAGAA AAATACAAAG GGCAAATCTG TCATATTTAT CGTGGAAACT TGATTTATAC AGCCCAAGAA TGCATCCACT GTAAACACCA GATTGCTTCA 300
GATATTGTGC GTTGGGGTAC AACAACCGTC CGGTTGTTAA TGAACGATGT TTCTGAATAC CGTACCTACC TCGAATTGAA AAAGCAACGC TTCAAATGCA 400
AAGCTTGTCA GCGGACCTTT GTCGCAGATA CTTCTGTTGC GAAAAAACAT TGTTTCATCA GTGAGAAAGT CCGCTGGTCT GTCATTGCTC GCTTAAAAAA 500
GAATACTTCC ATGACGGAAA TCGCTCGTCA GAAAAATATT TCCACTTCTT CGGTCTATCG TGTCATGAAG CGATTCTACC GCCCATTGAA TCCTTTCAAA 600
CAGACTTTGC CAAAGGTCTT ATGCTTTGAT GAATTCAAAT CGGTTCGAAG TGTTGCCAGT GCAATGAGTT TTATCATGAT GGACGGACAA AGCCATGCAT 700
TATTGGATAT TGTCGAAAAT CGACGCTTGC CTTATTTAGA ACGCTATTTT TCTCGGTTTT CATTAGCGAC TCGTGAAGCC GTTCAATTGA TTGTTATTGA 800
TATGTATGCG CCTTATGTTT CGTTGGTGAA AAAGCTTTTC CCGAAAGCTC AGTTGATCAT CGATCGTTTC CACATCGTCC AACATATTGG TCGTACCTTT 900
CGCAATCATC GAATCAAAGA AACGAACCAA CTATTAAAAA GCAAAGAACA AAAACACTAT CAATTAGGTA AGCAATTAAA AAGATACTGG AAACTTCTTC 1000
AAAAAGATGA ACGCAAGCTT GATTATACTC GACGCCTTTG GCGACCTGGC TTCAAAGCTC ATTTAACAGA GACCGATATT GTGGATCGCT TACTGAAAGG 1100
GAGCCCTGCT TTGCGTGTAG GCTATCAGTT ATATCAAGAC TTTCTTTACG CTGTAAAGGA ACGAGACTAC GTATCGTTTG AAGAACTACT TACCAATAAT 1200
ATCATGCTTC CCGAAGGCTA TCAGACGACC TTGAGAACGT TCCAGAAATT TCTGCCACAA ATCAAAAATG CTTTACAACA AAGTTATTCA AATGGCCCAC 1300
TTGAATGTCT GAACAACCAT ATCAAAGTGT TAAAACGAAA TGCATATGGC TTTCGTAGCT TTTATAATTT CAAATTGCGC ATCATGATTC GTCATGGCAA 1400
CGCATTGATT TTCAACTAAA AAAGATCAAG AGGAACTGAT CCACTTGATC TCCAATTATT CTAAGATTTC TCTTTACCAA CATCATTTGA CAAAGAGCC
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ORFs |
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Gene Name |
Associated TE |
Coordinates |
Class |
Sub Class |
Orientation |
tnp |
IS1251 |
127-1419 |
Transposase |
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Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
tnp |
Tnp |
IS1251 |
1293 |
127-1419 |
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Class: | Transposase |
Transpoase Chemistry: | DDE |
Protein Sequence:
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MSYTHLIKET LDILDLSVTF NENCLTKEKY KGQICHIYRG NLIYTAQECI HCKHQIASDI VRWGTTTVRL LMNDVSEYRT YLELKKQRFK CKACQRTFVA DTSVAKKHCF ISEKVRWSVI ARLKKNTSMT EIARQKNIST SSVYRVMKRF YRPLNPFKQT LPKVLCFDEF KSVRSVASAM SFIMMDGQSH ALLDIVENRR LPYLERYFSR FSLATREAVQ LIVIDMYAPY VSLVKKLFPK AQLIIDRFHI VQHIGRTFRN HRIKETNQLL KSKEQKHYQL GKQLKRYWKL LQKDERKLDY TRRLWRPGFK AHLTETDIVD RLLKGSPALR VGYQLYQDFL YAVKERDYVS FEELLTNNIM LPEGYQTTLR TFQKFLPQIK NALQQSYSNG PLECLNNHIK VLKRNAYGFR SFYNFKLRIM IRHGNALIFN
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