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Recombination Sites | |
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Internal Transposable Elements | |
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Internal Repeats | |
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References | |
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| Name: IS10_p |
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| Family: IS4 Group: IS10 |
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| Evidence of Transposition: no |
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| Map |
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| Terminal Inverted Repeats (IR) |
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| IRR (Length: 22 bp) |  | AAATTATGAGGGGATCTCTCAG |
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| Sequence |
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--------10 --------20 --------30 --------40 --------50 --------60 --------70 --------80 --------90 -------100
GATTGAAGAA ACCTTCCGAG ACTTGAAAAG TCCTGCCTAC GGACTAGGCC TACGCCATAG CCGAACGAGC AGCTCAGAGC GTTTTGATAT CATGCTGCTA 100
ATCGCCCTGA TGCTTCAACT AACATGTTGG CTTGCGGGCG TTCATGCTCA GAAACAAGGT TGGGACAAGC ACTTCCAGGC TAACACAGTC AGAAATCGAA 200
ACGTACTCTC AACAGTTCGC TTAGGCATGG AAGTTTTGCG GCATTCTGGC TACACAATAA CAAGGGAAGA CTCACTCGTG GCTGCAACCC TGCTTACTCA 300
AAATCTATTC ACACATGGTT ACGTTTTGGG GAAATTATGA GGGGATCTCT CAG
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| ORFs |
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| Gene Name |
Associated TE |
Coordinates |
Class |
Sub Class |
Orientation |
| tnp_p |
IS10_p |
2-340 |
Transposase |
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| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| tnp_p |
N |
IS10_p |
339 |
2-340 |
+ |
| Class: | Transposase |
| Transpoase Chemistry: | DDE |
| Comment: | highly similar to C terminal 112 amino acids of tnp (IS10R) |
Protein Sequence:
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IEETFRDLKS PAYGLGLRHS RTSSSERFDI MLLIALMLQL TCWLAGVHAQ KQGWDKHFQA NTVRNRNVLS TVRLGMEVLR HSGYTITRED SLVAATLLTQ
NLFTHGYVLG KL
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