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Recombination Sites | |
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Internal Transposable Elements | |
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Internal Repeats | |
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References | |
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| Name: IS1008 |
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| Family: IS6 |
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| Evidence of Transposition: no |
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| Map |
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| Terminal Inverted Repeats (IR) |
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| Sequence |
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--------10 --------20 --------30 --------40 --------50 --------60 --------70 --------80 --------90 -------100
GGCACTGTTG CAAATAGGCT GACATGATAA GCTAAATATC TTATTTATTT CGAGATACAG CAGATGAATC CCTTCCATGG TCGGCACTTT CAAGGTGAAA 100
TCATTCTTTG GGCTGTTCGT TGGTATTGTA AATATGGCAT CAGCTATCGT GAACTTCAAG AAATGCTCGC TGAACGAGGT GTGAATGTTG ACCACACCAC 200
AATTTATCGT TGGGTTCAGC GTTATGCTCC AGAAATGGAA AAACGCTTAC GCTGGTATTG GCGTAATCCT ACAGATTTAC ATTCATGGCA TATGGATGAG 300
ACTTATATCA AAGTGAAGGG GCGATGGACT TACCTGTATC GTGCAGTTGA TCAACGTGGT CATACGATTG ACTTTTACCT TTCCGCTAGA CGGAACAGTA 400
AATCAGCCTA TTGTTTTTTA GGAAAGATCT TCAATACGGT GAAAAAATGG CAAATTCCAC GGGTCATCAA TACAGATAAA GCAGCGACCT ATGGCCATGC 500
TTTATCACGG TTAAAGCGAG AAGGAAAATG TCCAGTAGAT ATTGAGCACA GGCAGATTAA GTATAAAAAT AATGTCATTG AATGTGATCA TGGTAAGTTA 600
AAGCGGATCA TCAGGGCCAC ATTAGGATTC AAATCTATGA AGACGGCTTA TGCCACAATT AAAGGTATTG AAGTCATGCG TGCACTACGT AAAGGACAAG 700
CATCGTCATT TTATTATGGT CAGCCTCAAG GTGAAGTGTG TCTAATCAAC AGGGTTTTCG GTCTCTAAGC ACTTTTAAAA AGGAACTTCA TCGACTCAAA 800
TCTCTATTTG CAACAGTGCC
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| ORFs |
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| Gene Name |
Associated TE |
Coordinates |
Class |
Sub Class |
Orientation |
| tnp |
IS1008 |
64-768 |
Transposase |
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| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| tnp |
Tnp |
IS1008 |
705 |
64-768 |
+ |
| Class: | Transposase |
| Transpoase Chemistry: | DDE |
Protein Sequence:
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MNPFHGRHFQ GEIILWAVRW YCKYGISYRE LQEMLAERGV NVDHTTIYRW VQRYAPEMEK RLRWYWRNPT DLHSWHMDET YIKVKGRWTY LYRAVDQRGH
TIDFYLSARR NSKSAYCFLG KIFNTVKKWQ IPRVINTDKA ATYGHALSRL KREGKCPVDI EHRQIKYKNN VIECDHGKLK RIIRATLGFK SMKTAYATIK
GIEVMRALRK GQASSFYYGQ PQGEVCLINR VFGL
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