 |
|
|
|
Host | |
|
|
|
|
|
|
|
|
Recombination Sites | |
|
|
|
|
|
Internal Transposable Elements | |
|
|
Internal Repeats | |
|
|
References | |
|
|
|
|
|
|
|
|
|
| Name: IS1007 |
|
| Family: IS6 |
|
| Evidence of Transposition: no |
|
|
|
| Map |
 |
| Terminal Inverted Repeats (IR) |
|
| Sequence |
|
|
|
|
--------10 --------20 --------30 --------40 --------50 --------60 --------70 --------80 --------90 -------100
GGCACTGTTG CAAATAGGCT GACATGATAA GCTAAATATC TTATTTATTT CGAGATACAG CAGATGAATC CCTTCCACGG TCGGCACTTT CAAGGTGAAA 100
TCATTCTTTG GGCTGTTCGT TGGTATTGTA AATATGGCAT CAGCTATCGT GAACTTCAGG AAATGCTCGC TGAACGTGGA GTGAATGTTG ATCACACCAC 200
AATTTATCGC TGGGTTCAGC GTTATGCTCC AGAAATGGAA AAACGTTTAC GTTGGTATTG GCGTAATCCT ACAGATCGAC ATTTATGGCA TCTGGATGAA 300
ACTTACGTAA AAGTGAATGG CAAATGGGCA TATCTATACC GTGCAGTTGA CCAACGTGGC CATACTCTTG ATTTCTATCT TTCTGCTAGA CGAAATACCC 400
ATTCAGCTTA TTGTTTTCTT GGTAAGATTT TGAATCATGT CAAAAAATGG CAGATTCCAC GAGTCATAAA CACTGATAAG GCTCATACCT ATGGCCGTGC 500
TTTGTCGCGA CTAAAACAGG AAGGAAAGTG TCCTGAAGAC CTGGACCATC GACAGATTAA ATACAAGAAT AACGTGATTG AATGTGATCA TGGCAAGCTC 600
AAACGGATCA TCAAGGCTAC GTTGGGATTC AAGTCTATGA AAACGGCTTA TGCCACAATT AAAGGAATTG AGGTTATGCG TGCTCTACGC AAAGGACAAG 700
CTTCATTATT TTATAACGGT AATATTCTAG GAGAAGTTTG GCTAGTAAAT AGAGTTTTCG GTCTCTAAGC TTTTTTGAAG GGAAAATCAT TGACTCAGAT 800
CCCTATTTGC AACAGTGCC
|
|
|
|
| ORFs |
|
|
| Gene Name |
Associated TE |
Coordinates |
Class |
Sub Class |
Orientation |
| tnp |
IS1007 |
64-768 |
Transposase |
|
+ |
| Gene Name |
Protein Name |
Associated TE |
Gene Length |
Coordinates |
Strand |
| tnp |
Tnp |
IS1007 |
705 |
64-768 |
+ |
| Class: | Transposase |
| Transpoase Chemistry: | DDE |
Protein Sequence:
|
MNPFHGRHFQ GEIILWAVRW YCKYGISYRE LQEMLAERGV NVDHTTIYRW VQRYAPEMEK RLRWYWRNPT DRHLWHLDET YVKVNGKWAY LYRAVDQRGH
TLDFYLSARR NTHSAYCFLG KILNHVKKWQ IPRVINTDKA HTYGRALSRL KQEGKCPEDL DHRQIKYKNN VIECDHGKLK RIIKATLGFK SMKTAYATIK
GIEVMRALRK GQASLFYNGN ILGEVWLVNR VFGL
|
|
|
