ISCausp2
- Family IS1595
- Group ISNha5
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
NC_010338 | ND | Caulobacter sp. | Caulobacter sp. K31 |
DNA section
IS Length : 7915 bp
Ends
IR Length : 25/26
IRL : CGCCATTGTGGAGCAAACGCACCAAGTGGCCTGAGACCTAAGTTATTGTT
IRR : CGCCATTGTGGAGCAAACGCACCTAGGCACTGAATCGGGGGTCCGGGGGT
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
TCGGCGAACGAGCG | GCTTTCGG | CGCCGTAGAGGGTG | 8 |
DNA sequence
CGCCATTGTGGAGCAAACGCACCAAGTGGCCTGAGACCTAAGTTATTGTTCTTGCTACGTTCTAAGCATGAGCAACGATGTCATTCCCTGGGATGCCGAC
CAACCCAACGTCCTGCACGCCCTTACAAGGAAGCGTGCCGAGATCGCCGGCCAGATCGAGCACAACCAACTCACCCTCCGTCATCTGATCGCCGAACTCG
ACCACGTCGATGCGACGATCCGCATCTTCAACCCGGCCGTCGATATTGGCGCGATCCGATCAAAGCCGGTTCCGCCGCGCCATGCGGCGTTCAAGGGTGA
AGTGACGCGGGTCGTCTTCAAGACGCTTCGGGAAGCGACGGCGCCGGTCACGTCTCGCGACATAGCAATACGCCTGATGAACGAGCGGGGCCTGAACCCA
GACGACAAGGAGTTGTCCGTCATCATGGTCAAACGCGTGTGCGCCTGCCTGCGAGTGCAGAAGAACAAGGGCTTGATCCGCAACGCTGAGAGCTTCGGCA
ATCTGCAAGGCTGGGAGGCTGTGCGATGACACCCTTTCGTACTGGCGCGCTCCGGTTCACCCGTGGGCGCCACGCCTACATCGTCGCGCCGGCGTATGAC
GGCGACGGCTACATCGGGCTCCGAGATGGACGGATCATAGCTAGGGCATCGGAGCGTGCGGATGTGACCCGCGCGCTGATCGTTCGGTATAACCTGTAGA
GCTTCTTGGTCGCGATCTTCGCTCCACACCGAATACTGCGGAGGCTGTGCAGTCGTCTGGGGTGCGAGCCCGGCCGCATCGGACTGGTCAGCGGCGCCCG
AATTTCTTAGAGCTTGGCCGTTATCCCTGGATTGAAATCTGCTATTCTCGCTGAGTAGTAGAGGGACGCTCCATGCCATCGACGACCGATTTCCAAGAAT
TTCTCGACAGCGAAGCCCCAGATGGCGCTCAAGAGCGCGCCGATCTGGCCGCCTGCGCCTCTGGCCCAGACGATATAGGAAGGTATTCTAGCGTAATTGC
TCCGAACGGCGCCCTGATCGTCAGCGGTGGTGGGGAGACTACGTTAGCGCTTACCTCTCCGAAGGCCAAGGCGGCGTTCTTGGCGATACTTGAAGGTGAA
GTTAGCGAGCCTGGAGCGACCCTGGAGGGCGACGCTGAATTCGAACGGTCCATGCAGAAAGACGACTAGGCGTCGCCGAAGTTCGAACAGGTGCCTAATC
GTCGAGGACGGGAATGCGATGGAAGCAGACTTCCGGTGCCTCCCATTCCTCCACTAACCCATTAGCGTTTCGCCACGCGGTAGTAATCAAGCCCATCCCA
TCGATGTCTACTACGAGCATTTTTTCACTACCGCTGTTCCAGCGGACAACGTCGCCGATGCGGATCGCAGGCTCTCGCTGATCACGGAAATCTTCAGCGC
GCTTAACGAGGCGTAAGTCGTTTTCGTTGTGTCTTTGGGTGTGAAACATCGGGGATTGTATAACCTGTGAGTGAGCCAACCTTCAAAGCCGGCGATACGG
TGCGCCTAAAGTCCGACACGGTCCTAATGACAGTGGAAAGGCTCTTCCCAACAGAAGACGACAGTTGGGAGTATGTCTGCGTATGGCGAGCAGACAACAA
GACGCTTCGAGAGCGTTATGCGGAAGTTTTACTTGAGGCGGCAAAAAGGCCGAGGCACCGATCCGTGCCTATACGCAGGGGCTAGTCGCAAGCGTCGAAA
CTGAAGCCTTATAGGAAAAGAATCCTATAAGGCTTTGGGCTTAAAGTCAAGAAACGCGTCATAGTAGGTCGCCCGCCGGCGAGTGGCGGCCATTTTTATG
CTGACGAGGGGCTATATACCTGGGCGGGTTGCTGCCTGAATCAGGTATTTTTTCACAGTATCATCTAACGCCAGCACCGTCGTGTAGCGCAGTGTCACCG
TTTCGCCCGTTCCATTGGCATACCTATCGAGTCCCCAAGACATAATTGGCTTTACTCGCCTAAGAACGTCGGCCTTCATAGCGAACGGAACAACACGGCC
GATTTCATCATCGAACACTCCTCCGTGTCCAGAGTTTACGTTAAAAGACGCAACGGAAAAGTCGCGCATTTTAACTGTATTATCAAAATAGAATCCTTCG
ACATAATGCTTGGTTACCGGAGTAAAGCTACCAATCTGGTGTGTTCCTCCGAAGATGTTCATCACCTTAGCGCCATCGCCAATTACCGAATGCGCCTGGC
GAACCGATGGTTCTGTCGCCGCAACGAGAGCCTCCAGATCACCTCCACGCGTGCGTTCAAGGTGCCGAAGCTCGGCGGTCTGGGGCTGGGGCTCGATGCC
CAAGTTTCGATCGATTGTTCTTTTGAACGTGTCGTAGAGCAGGGCCTTGCCAGCCTCAGGCGCGATCTGCACCGACGTGCCGAGCGCTGAAATTCCGTCC
AGATAGACGCGGAACTTCGAAAGAACGCTCCCCTCTTCGAGGGCAAAAGCCTTTACCGCAGACCGGCCGGTGAAATCGCCTCGCCGTCGAATTTTACCTG
TTTCAATGTAGTTGGCGACCAGGGATAGCGATAGAGAAAAGCCAGCCAGAGAAGTGTAGCCGTCATACGCGGGCATCGCGTGAAATGAGGCGTCGCCACC
ATCTAGTTCTAATTGGAAAGGAACTTCTACCAGCACCGTGGGCGCCCCATCTCAACCAAGCAAGCTTCACTGAAGCCGCTCCACGGACGACATTGCAACT
GAAATTTGCCCGTCAGACGATAACGACGGGCACGCTCTCAACTTCCTGAGATGAAAATTCCAAGCGCAGGACGAGTTTCAGCACGCGCCAATGATCACCG
GAGGTCCAGTTAATCACCCGCATTCGCGGCCCCTTGAACTCGAACTCGTGCATGTGAAGCCGCACCACATGCCTATCTTGGATGCCTTTTTCATAGGGAG
AGTCATGCGTGAACATAAGTTCGAATGCCGGAACCTCTTCTGGCCGAACGGGAAATCCTTCTCTAACCTGAGATAGCAAGCCGCACCAATGTATGAACGC
CGAGTTCAACATCGTAACTGGAAGAAATATTCTATCTTCCTGAGATGGCCCCATGTCACCGAGAAATACGGTGTCGGAACTACCAACGATCATCCTGTGC
TTTATGGTATCGTTGATACTAAATTCCACTAAGTACCCATCAGCAGCAAGATTAATTGACCTATCTGCTCCGCACATATCTCGAACGCGGTCAAAGACGT
GATCAGGTAATGGAGTTATAGACTTCCAATTTATACAGATATTTTTTGCGGCTCCCTGAGACGCGTTTCTTGCCACTATTGGGAATGGAATGCTTAGTGG
GGGCGCATTGTCTGGATATAAACTCCACGTAAAATCAATTATGTTCGAAGGAGTTTTGGGGGTGATGCGAGCCCTAGCCCCCAGAACTCTTGCTGCGCGC
ATCTCCTTTACCGTCAAGTAGGTTGCAAATGCCGCGCCCAGCGATCCGAGCGAGGCAACGGCAGCTACGATCTTGTCCCACGAGGCTGAGGTGGTGGTGC
TTATAATCCCCCCCAGGATACCGGCAGCCAATCCGCAGCATGCAACCAGAATCCAAAGGTCCCAGCGAGGATGCTCGCCCGCCGGCCCAGGATGACTCTC
TCGTTTTTTGTCAGGCAACATCTATGAACCCCTGAGCAGAGTCTCCCATCAACCCTACGTCGAGGCAACTCGATGGCGCTCATTTGATTTGCCGGTCGTA
TTCCTAAGCGCCGATCAGCGGCGCGGCGGACGACTGATCGCAGCCGAACGACGAGTAGGTGTTCTCGTCGACGTTCAGATACAGCTCCGGCGTCGTGCCT
TTCACGCCGCCCGTGTTGTAGACGAACAAGATCGGCTCGCTGGCACCCATGTAGCCACCGCAGACCGTTGTATCACCGTCCTTCTCTTTATACGCCCAGG
CCCTCGACACCGAGACCACCCGGCCAACCTTGGCCGAGATCAGCTTCTCCAGCCGGCCCAGCCAGATCGACTTCTCCTCGTTGTTGACCGTGATGGTCTG
CCTCAGGCCAACGGGAGGAATGTAGTGGACGTCGTCAAAAGTGGTGTGCTGCTCAGGATCGACACGCGCCGGCACCGGCCCCCCGGCGGTGATGTCACTG
GCCGACGATGTGATAATCGGCTTGGCGACCGAAGCTGCCTGCCTGGTCGCGGGAGCTGGTGCGGTCGGTGAATTGATCACCTTTGGCGCCGGCACCGGAC
GCAGCACCCAAACTGCCGCCAGGAAAACGCCGGCGAAGATCGACGTCACCAATATCGCGAACCGCATTTCCCGCCCCCAAAAACCAATATCATCACTATA
GTGACTGGCTCTAGGTTGAGGATTCGTTGCCGCTGCCCCCTATGCGTTTGGGGCAGGCCCTCGGGATAAATGTGCGCCGGCTTCGTAAGGAGCGCGGGCT
GAGCCAGGAGGCGTTGGCCGACGCCGTCGGGCTTGCGCCGACCTATGTCGGGCAGATCGAGCGCGGCCTCAGAAACCCGACCCTGGATGTCGTGGAGCGC
TTTGCGGACGTTCTAGGCGCGGAGGCGCTGGACCTTCTGCGAGTTAGCCCTGACCCGAGATGAGCTTTTGGCGGATCACTTCTGCGTCCGGCGCATCTGC
ATCGAACGGCAGATCGTAAGCCATCAGGTCGACCGTTCGGACTCCCAGGGCCGCAAGACATTGAATCAGAAACACCCCGGAGAAGGTGCCTCTGGCCACC
TTGTTGCGGATATTGCGCTCGTTGTCGTCAACACCCAGGGGCCTCAGGCGCTCGACCATGTCGGCGTAAGTAAGTCCCTTTCGCACCATCTCTATACGGA
CTATCCGGTGCGCAACGTCGTTCCAGGCGGCCACGCGCATCTCCTATGGAGCTATAGCATCATATATGATGCTTTTTGATTGACAAACGCGCCCTGCGTC
GTGCAAAGGCATCATATATGATGCTTATGCACGGAAAGGCAGTTTGCGACAACACTTTCTCCTCAGCGCTAAGGCGCGGACGCTAGGCGTCGTCGAGATC
GCTCGTATGAGCGATGACGAAGCTTACGCCGCGTTCCGGGCGGTTCGCTTCGCGGACAACGGAGGAGAGGCCTACTGCGCTCACTGCGGGTGCGATGCCG
TTTACGAGTACGCGGCGCGGCGCATTTTCAAATGTAAGGCGTGCGAGAAGCAGTTCTCGCTAACATCGGGCACGATTTTCGCCAGCCGGAAGCTGGCGAT
CCGCGACATCCTGACGGCGATCGCGCTGTTCGTGAACGGTGCCAACGGCCACGCTGCGCTGCGGATGGGCCGCGACCTCAATGTCTCGTACAAGACCGCG
TTCGTCCTACTGCATAAGCTGCGCGAGGTGATGGGGTCGCTTAAGCCAAAGGAAATGCTCACCGGGCAAGTCGAAATTGACGGTGTATGGGTTGGCGGCC
ACGTCAAAGGACCAAACCTCAAAATCGAGCAGAAAGAGCGGCGCCGGAAGAAGGCGGGGGGCGAGCCGGAATATCCACCCAAAAATGAGGCTAAGCGCTT
CTCGGTCGTAACCATGCGGGAACGTCGCGAAGGGGGCCGCTCACTATCCTTCGTGTTTAAGAGCGAAAGCCAGGGCGTCAAATCCGTCCTGGAGAACGTT
GATCCAGCCGCTGAGGTGATCACGGACGGTGGGCCGCATTGGGGGCAGCTTGTGCTTCGGTATGCCAATACCAGCCAGGTGAACCATTCCATTGGCCACG
TTATCGATGGCGTCCATATCAACGGTGTGGAGGGCTTCAACTCGCGAATTCGACGTGGGGAGCGTGGCGTCCACCACCACATCGCCGGCCGGTATCTCCA
GTTCTACGCTGACGAGTTTGCATGGCGCGACGACCATCGCCGCGTCAGCAACGGTCAACAGTTTCAAATGGTCTTGGCGGCGGCAGCGCGGCACCCGGTG
TCGGGCGAATGGAAAGGTTTCTGGCAGCGGCGGAAAGCCGGCGCTCCGGCACGGGCACCCGCGTCCAGCGCATCGGCGGGCCGTCGAGGCGAACGACCAC
CCCCTCGTTAAAGCGCGCCTGAAAAGTGTTTTGTACGGACGAGCTGATCTTAGCCAGTGCTCGATGATCGCTAGGATCGACGCCGATCTCGACCGCGACT
ATTCGGGCGACCTCTGAGCTGGTCAGCGGCTGATCGGCGGTCCGCAGCGTCGCATAGGCAAGGCGTGAAATTTGTCCCGTCGGCTTCTTACCCTGTCGGA
AATAGATCGGCTTGATGTGGCCAGCGGTCCAATCCGGCACGTACCGCTGCCGAATTTTTGCAGCCGTCTCCTCCATCACATCTAGATACCGCTTCCGCCG
TTCGACGACGCGGGCGGCGGACAGTTCCAGCGCTTTCCGACCAACGACAACTTCTTGGACCTGCGCCGCCGTCTCGTAGTTCCCCAGCGCGCGGGCGTAT
CGCCGCTCCAGCGTCTCGATCGTAGCTTGGTTTCTCATGGGCGCATCCCGCCCGTGTATTCGTAAAAATCCCCCTACAACTTTAACTTAAGCGCCCCGAT
GAGTTGTGAAATCGATTCGACTCGGGGTCAGGAATCAGCCGACGTTTCGCTGCTCGTCGGGAGCGTCGGGAGAAATCTGATGGCAGACAAAGGTGATAAC
CTCCGTATCAAGTACGGGTTGGTCAACAATCCGAGCATCGCGCTTCAAAAGCAGTGGGCGGCTCTCACCGAGGCGCTGATCCGCCAAGGTAACACTAGCG
ACGCCGCTGGCCGACTAGCGGCGCAGCAGTTGTTCCCCGAATATAGGCAAAGAGTCTACGCCTCCGAAGGAGACGCGATCGAAATGCTGTTGCGTCAGAT
CAACGACAAATGACGCAGGCGATACCGCTCTGGCAGGCGATGGTTTCGCTATTCGGCGTAATTGTCGTCGGCCTGATCGGCCATATGGTTTCGGTTGCAA
AGCTGAAGACCGAACTTGACCAAAAGAATTTCGAAAACTCAATGAGAGTTCTCGAAACCCATGATGCTGCCTACAGGACTTACACCTCTGCAATGGAAGC
TTATGTTTTAGCTCCTGAGCCTGACTACGAAGATTTTATGAAAGTCGTCTCTTCTGGCGATGTGTATTTTAATCAGCTAAATCTGATTTGCAGCACCATG
ATTTCAGGCAAAGTAGATCACAATATCCGAGATAAAATCTGGATGCCGAAGATCAAAGTGGCCTTCGAAAAATCCCTGCCCATGCACTATGACACTCTGC
GCAATGCAGCGAAGAAGAGGGGCTTCCCCTACAAGGGCGAGCTTCGCCGGCGGGATCACGAAAGCATTTTCGCAGTAGCGGAAATGTTCAGCGCATCCGA
TGCATGGCAGCGCCCACACGAAGCCAACTAGCTCCTCTTCCATACCGTCTTTGTCGAGAAGGAAGAGTGATGCACGCTATCGCCACCCCGCCGTCAACGG
TCTTCAACTGGGATGCGCTTTCAGCACTCGCTACGCTTGCCGCGACCTTGGCAGCGATAGGGATCGCCCTAGCCACTCATATGATAGATAGCCGTCGGCG
CCGCGCAGCATCACTGAGTGCGCTGAGCTTGGCGGGCAAGATTGCGAAGGACGCAATCTCATTTTTTGAAGCCATCGCCTTGCAAGAAACTGGTTCGACG
TCGAGCCACCGAGCAAAGTTCATTGTTGGCGGTGCCCCGATGCAGGAGCTTTTCCAGAACATGGGAGAGGTCCGCCTGATGGATTTGCCAACATCATCTG
CGATCGACGCCTACAGCCGCGTGCGCTCCCACGTGAGAAGCTACGAGAAAAAGCTGGAGGTGTTGATCAACACGCCTGGTTCCGCCGGAAGGGTCGGCAT
CTCCGAACACCTTCAAGGCTGCATCGCGGCGGCAGCGATCATCGAGGCGGAACGGAAGCGATAATACCCCCGGACCCCCGATTCAGTGCCTAGGTGCGTT
TGCTCCACAATGGCG
CAACCCAACGTCCTGCACGCCCTTACAAGGAAGCGTGCCGAGATCGCCGGCCAGATCGAGCACAACCAACTCACCCTCCGTCATCTGATCGCCGAACTCG
ACCACGTCGATGCGACGATCCGCATCTTCAACCCGGCCGTCGATATTGGCGCGATCCGATCAAAGCCGGTTCCGCCGCGCCATGCGGCGTTCAAGGGTGA
AGTGACGCGGGTCGTCTTCAAGACGCTTCGGGAAGCGACGGCGCCGGTCACGTCTCGCGACATAGCAATACGCCTGATGAACGAGCGGGGCCTGAACCCA
GACGACAAGGAGTTGTCCGTCATCATGGTCAAACGCGTGTGCGCCTGCCTGCGAGTGCAGAAGAACAAGGGCTTGATCCGCAACGCTGAGAGCTTCGGCA
ATCTGCAAGGCTGGGAGGCTGTGCGATGACACCCTTTCGTACTGGCGCGCTCCGGTTCACCCGTGGGCGCCACGCCTACATCGTCGCGCCGGCGTATGAC
GGCGACGGCTACATCGGGCTCCGAGATGGACGGATCATAGCTAGGGCATCGGAGCGTGCGGATGTGACCCGCGCGCTGATCGTTCGGTATAACCTGTAGA
GCTTCTTGGTCGCGATCTTCGCTCCACACCGAATACTGCGGAGGCTGTGCAGTCGTCTGGGGTGCGAGCCCGGCCGCATCGGACTGGTCAGCGGCGCCCG
AATTTCTTAGAGCTTGGCCGTTATCCCTGGATTGAAATCTGCTATTCTCGCTGAGTAGTAGAGGGACGCTCCATGCCATCGACGACCGATTTCCAAGAAT
TTCTCGACAGCGAAGCCCCAGATGGCGCTCAAGAGCGCGCCGATCTGGCCGCCTGCGCCTCTGGCCCAGACGATATAGGAAGGTATTCTAGCGTAATTGC
TCCGAACGGCGCCCTGATCGTCAGCGGTGGTGGGGAGACTACGTTAGCGCTTACCTCTCCGAAGGCCAAGGCGGCGTTCTTGGCGATACTTGAAGGTGAA
GTTAGCGAGCCTGGAGCGACCCTGGAGGGCGACGCTGAATTCGAACGGTCCATGCAGAAAGACGACTAGGCGTCGCCGAAGTTCGAACAGGTGCCTAATC
GTCGAGGACGGGAATGCGATGGAAGCAGACTTCCGGTGCCTCCCATTCCTCCACTAACCCATTAGCGTTTCGCCACGCGGTAGTAATCAAGCCCATCCCA
TCGATGTCTACTACGAGCATTTTTTCACTACCGCTGTTCCAGCGGACAACGTCGCCGATGCGGATCGCAGGCTCTCGCTGATCACGGAAATCTTCAGCGC
GCTTAACGAGGCGTAAGTCGTTTTCGTTGTGTCTTTGGGTGTGAAACATCGGGGATTGTATAACCTGTGAGTGAGCCAACCTTCAAAGCCGGCGATACGG
TGCGCCTAAAGTCCGACACGGTCCTAATGACAGTGGAAAGGCTCTTCCCAACAGAAGACGACAGTTGGGAGTATGTCTGCGTATGGCGAGCAGACAACAA
GACGCTTCGAGAGCGTTATGCGGAAGTTTTACTTGAGGCGGCAAAAAGGCCGAGGCACCGATCCGTGCCTATACGCAGGGGCTAGTCGCAAGCGTCGAAA
CTGAAGCCTTATAGGAAAAGAATCCTATAAGGCTTTGGGCTTAAAGTCAAGAAACGCGTCATAGTAGGTCGCCCGCCGGCGAGTGGCGGCCATTTTTATG
CTGACGAGGGGCTATATACCTGGGCGGGTTGCTGCCTGAATCAGGTATTTTTTCACAGTATCATCTAACGCCAGCACCGTCGTGTAGCGCAGTGTCACCG
TTTCGCCCGTTCCATTGGCATACCTATCGAGTCCCCAAGACATAATTGGCTTTACTCGCCTAAGAACGTCGGCCTTCATAGCGAACGGAACAACACGGCC
GATTTCATCATCGAACACTCCTCCGTGTCCAGAGTTTACGTTAAAAGACGCAACGGAAAAGTCGCGCATTTTAACTGTATTATCAAAATAGAATCCTTCG
ACATAATGCTTGGTTACCGGAGTAAAGCTACCAATCTGGTGTGTTCCTCCGAAGATGTTCATCACCTTAGCGCCATCGCCAATTACCGAATGCGCCTGGC
GAACCGATGGTTCTGTCGCCGCAACGAGAGCCTCCAGATCACCTCCACGCGTGCGTTCAAGGTGCCGAAGCTCGGCGGTCTGGGGCTGGGGCTCGATGCC
CAAGTTTCGATCGATTGTTCTTTTGAACGTGTCGTAGAGCAGGGCCTTGCCAGCCTCAGGCGCGATCTGCACCGACGTGCCGAGCGCTGAAATTCCGTCC
AGATAGACGCGGAACTTCGAAAGAACGCTCCCCTCTTCGAGGGCAAAAGCCTTTACCGCAGACCGGCCGGTGAAATCGCCTCGCCGTCGAATTTTACCTG
TTTCAATGTAGTTGGCGACCAGGGATAGCGATAGAGAAAAGCCAGCCAGAGAAGTGTAGCCGTCATACGCGGGCATCGCGTGAAATGAGGCGTCGCCACC
ATCTAGTTCTAATTGGAAAGGAACTTCTACCAGCACCGTGGGCGCCCCATCTCAACCAAGCAAGCTTCACTGAAGCCGCTCCACGGACGACATTGCAACT
GAAATTTGCCCGTCAGACGATAACGACGGGCACGCTCTCAACTTCCTGAGATGAAAATTCCAAGCGCAGGACGAGTTTCAGCACGCGCCAATGATCACCG
GAGGTCCAGTTAATCACCCGCATTCGCGGCCCCTTGAACTCGAACTCGTGCATGTGAAGCCGCACCACATGCCTATCTTGGATGCCTTTTTCATAGGGAG
AGTCATGCGTGAACATAAGTTCGAATGCCGGAACCTCTTCTGGCCGAACGGGAAATCCTTCTCTAACCTGAGATAGCAAGCCGCACCAATGTATGAACGC
CGAGTTCAACATCGTAACTGGAAGAAATATTCTATCTTCCTGAGATGGCCCCATGTCACCGAGAAATACGGTGTCGGAACTACCAACGATCATCCTGTGC
TTTATGGTATCGTTGATACTAAATTCCACTAAGTACCCATCAGCAGCAAGATTAATTGACCTATCTGCTCCGCACATATCTCGAACGCGGTCAAAGACGT
GATCAGGTAATGGAGTTATAGACTTCCAATTTATACAGATATTTTTTGCGGCTCCCTGAGACGCGTTTCTTGCCACTATTGGGAATGGAATGCTTAGTGG
GGGCGCATTGTCTGGATATAAACTCCACGTAAAATCAATTATGTTCGAAGGAGTTTTGGGGGTGATGCGAGCCCTAGCCCCCAGAACTCTTGCTGCGCGC
ATCTCCTTTACCGTCAAGTAGGTTGCAAATGCCGCGCCCAGCGATCCGAGCGAGGCAACGGCAGCTACGATCTTGTCCCACGAGGCTGAGGTGGTGGTGC
TTATAATCCCCCCCAGGATACCGGCAGCCAATCCGCAGCATGCAACCAGAATCCAAAGGTCCCAGCGAGGATGCTCGCCCGCCGGCCCAGGATGACTCTC
TCGTTTTTTGTCAGGCAACATCTATGAACCCCTGAGCAGAGTCTCCCATCAACCCTACGTCGAGGCAACTCGATGGCGCTCATTTGATTTGCCGGTCGTA
TTCCTAAGCGCCGATCAGCGGCGCGGCGGACGACTGATCGCAGCCGAACGACGAGTAGGTGTTCTCGTCGACGTTCAGATACAGCTCCGGCGTCGTGCCT
TTCACGCCGCCCGTGTTGTAGACGAACAAGATCGGCTCGCTGGCACCCATGTAGCCACCGCAGACCGTTGTATCACCGTCCTTCTCTTTATACGCCCAGG
CCCTCGACACCGAGACCACCCGGCCAACCTTGGCCGAGATCAGCTTCTCCAGCCGGCCCAGCCAGATCGACTTCTCCTCGTTGTTGACCGTGATGGTCTG
CCTCAGGCCAACGGGAGGAATGTAGTGGACGTCGTCAAAAGTGGTGTGCTGCTCAGGATCGACACGCGCCGGCACCGGCCCCCCGGCGGTGATGTCACTG
GCCGACGATGTGATAATCGGCTTGGCGACCGAAGCTGCCTGCCTGGTCGCGGGAGCTGGTGCGGTCGGTGAATTGATCACCTTTGGCGCCGGCACCGGAC
GCAGCACCCAAACTGCCGCCAGGAAAACGCCGGCGAAGATCGACGTCACCAATATCGCGAACCGCATTTCCCGCCCCCAAAAACCAATATCATCACTATA
GTGACTGGCTCTAGGTTGAGGATTCGTTGCCGCTGCCCCCTATGCGTTTGGGGCAGGCCCTCGGGATAAATGTGCGCCGGCTTCGTAAGGAGCGCGGGCT
GAGCCAGGAGGCGTTGGCCGACGCCGTCGGGCTTGCGCCGACCTATGTCGGGCAGATCGAGCGCGGCCTCAGAAACCCGACCCTGGATGTCGTGGAGCGC
TTTGCGGACGTTCTAGGCGCGGAGGCGCTGGACCTTCTGCGAGTTAGCCCTGACCCGAGATGAGCTTTTGGCGGATCACTTCTGCGTCCGGCGCATCTGC
ATCGAACGGCAGATCGTAAGCCATCAGGTCGACCGTTCGGACTCCCAGGGCCGCAAGACATTGAATCAGAAACACCCCGGAGAAGGTGCCTCTGGCCACC
TTGTTGCGGATATTGCGCTCGTTGTCGTCAACACCCAGGGGCCTCAGGCGCTCGACCATGTCGGCGTAAGTAAGTCCCTTTCGCACCATCTCTATACGGA
CTATCCGGTGCGCAACGTCGTTCCAGGCGGCCACGCGCATCTCCTATGGAGCTATAGCATCATATATGATGCTTTTTGATTGACAAACGCGCCCTGCGTC
GTGCAAAGGCATCATATATGATGCTTATGCACGGAAAGGCAGTTTGCGACAACACTTTCTCCTCAGCGCTAAGGCGCGGACGCTAGGCGTCGTCGAGATC
GCTCGTATGAGCGATGACGAAGCTTACGCCGCGTTCCGGGCGGTTCGCTTCGCGGACAACGGAGGAGAGGCCTACTGCGCTCACTGCGGGTGCGATGCCG
TTTACGAGTACGCGGCGCGGCGCATTTTCAAATGTAAGGCGTGCGAGAAGCAGTTCTCGCTAACATCGGGCACGATTTTCGCCAGCCGGAAGCTGGCGAT
CCGCGACATCCTGACGGCGATCGCGCTGTTCGTGAACGGTGCCAACGGCCACGCTGCGCTGCGGATGGGCCGCGACCTCAATGTCTCGTACAAGACCGCG
TTCGTCCTACTGCATAAGCTGCGCGAGGTGATGGGGTCGCTTAAGCCAAAGGAAATGCTCACCGGGCAAGTCGAAATTGACGGTGTATGGGTTGGCGGCC
ACGTCAAAGGACCAAACCTCAAAATCGAGCAGAAAGAGCGGCGCCGGAAGAAGGCGGGGGGCGAGCCGGAATATCCACCCAAAAATGAGGCTAAGCGCTT
CTCGGTCGTAACCATGCGGGAACGTCGCGAAGGGGGCCGCTCACTATCCTTCGTGTTTAAGAGCGAAAGCCAGGGCGTCAAATCCGTCCTGGAGAACGTT
GATCCAGCCGCTGAGGTGATCACGGACGGTGGGCCGCATTGGGGGCAGCTTGTGCTTCGGTATGCCAATACCAGCCAGGTGAACCATTCCATTGGCCACG
TTATCGATGGCGTCCATATCAACGGTGTGGAGGGCTTCAACTCGCGAATTCGACGTGGGGAGCGTGGCGTCCACCACCACATCGCCGGCCGGTATCTCCA
GTTCTACGCTGACGAGTTTGCATGGCGCGACGACCATCGCCGCGTCAGCAACGGTCAACAGTTTCAAATGGTCTTGGCGGCGGCAGCGCGGCACCCGGTG
TCGGGCGAATGGAAAGGTTTCTGGCAGCGGCGGAAAGCCGGCGCTCCGGCACGGGCACCCGCGTCCAGCGCATCGGCGGGCCGTCGAGGCGAACGACCAC
CCCCTCGTTAAAGCGCGCCTGAAAAGTGTTTTGTACGGACGAGCTGATCTTAGCCAGTGCTCGATGATCGCTAGGATCGACGCCGATCTCGACCGCGACT
ATTCGGGCGACCTCTGAGCTGGTCAGCGGCTGATCGGCGGTCCGCAGCGTCGCATAGGCAAGGCGTGAAATTTGTCCCGTCGGCTTCTTACCCTGTCGGA
AATAGATCGGCTTGATGTGGCCAGCGGTCCAATCCGGCACGTACCGCTGCCGAATTTTTGCAGCCGTCTCCTCCATCACATCTAGATACCGCTTCCGCCG
TTCGACGACGCGGGCGGCGGACAGTTCCAGCGCTTTCCGACCAACGACAACTTCTTGGACCTGCGCCGCCGTCTCGTAGTTCCCCAGCGCGCGGGCGTAT
CGCCGCTCCAGCGTCTCGATCGTAGCTTGGTTTCTCATGGGCGCATCCCGCCCGTGTATTCGTAAAAATCCCCCTACAACTTTAACTTAAGCGCCCCGAT
GAGTTGTGAAATCGATTCGACTCGGGGTCAGGAATCAGCCGACGTTTCGCTGCTCGTCGGGAGCGTCGGGAGAAATCTGATGGCAGACAAAGGTGATAAC
CTCCGTATCAAGTACGGGTTGGTCAACAATCCGAGCATCGCGCTTCAAAAGCAGTGGGCGGCTCTCACCGAGGCGCTGATCCGCCAAGGTAACACTAGCG
ACGCCGCTGGCCGACTAGCGGCGCAGCAGTTGTTCCCCGAATATAGGCAAAGAGTCTACGCCTCCGAAGGAGACGCGATCGAAATGCTGTTGCGTCAGAT
CAACGACAAATGACGCAGGCGATACCGCTCTGGCAGGCGATGGTTTCGCTATTCGGCGTAATTGTCGTCGGCCTGATCGGCCATATGGTTTCGGTTGCAA
AGCTGAAGACCGAACTTGACCAAAAGAATTTCGAAAACTCAATGAGAGTTCTCGAAACCCATGATGCTGCCTACAGGACTTACACCTCTGCAATGGAAGC
TTATGTTTTAGCTCCTGAGCCTGACTACGAAGATTTTATGAAAGTCGTCTCTTCTGGCGATGTGTATTTTAATCAGCTAAATCTGATTTGCAGCACCATG
ATTTCAGGCAAAGTAGATCACAATATCCGAGATAAAATCTGGATGCCGAAGATCAAAGTGGCCTTCGAAAAATCCCTGCCCATGCACTATGACACTCTGC
GCAATGCAGCGAAGAAGAGGGGCTTCCCCTACAAGGGCGAGCTTCGCCGGCGGGATCACGAAAGCATTTTCGCAGTAGCGGAAATGTTCAGCGCATCCGA
TGCATGGCAGCGCCCACACGAAGCCAACTAGCTCCTCTTCCATACCGTCTTTGTCGAGAAGGAAGAGTGATGCACGCTATCGCCACCCCGCCGTCAACGG
TCTTCAACTGGGATGCGCTTTCAGCACTCGCTACGCTTGCCGCGACCTTGGCAGCGATAGGGATCGCCCTAGCCACTCATATGATAGATAGCCGTCGGCG
CCGCGCAGCATCACTGAGTGCGCTGAGCTTGGCGGGCAAGATTGCGAAGGACGCAATCTCATTTTTTGAAGCCATCGCCTTGCAAGAAACTGGTTCGACG
TCGAGCCACCGAGCAAAGTTCATTGTTGGCGGTGCCCCGATGCAGGAGCTTTTCCAGAACATGGGAGAGGTCCGCCTGATGGATTTGCCAACATCATCTG
CGATCGACGCCTACAGCCGCGTGCGCTCCCACGTGAGAAGCTACGAGAAAAAGCTGGAGGTGTTGATCAACACGCCTGGTTCCGCCGGAAGGGTCGGCAT
CTCCGAACACCTTCAAGGCTGCATCGCGGCGGCAGCGATCATCGAGGCGGAACGGAAGCGATAATACCCCCGGACCCCCGATTCAGTGCCTAGGTGCGTT
TGCTCCACAATGGCG
Protein section
ORF number : 10
ORF 5
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
192 bp | 63 aa | 4563 | 4372 | - | No |
Annotation : Transcriptional regulator, XRE familyDescription : Transcriptional Regulator factor
ORF sequence :
MRRLRKERGLSQEALADAVGLAPTYVGQIERGLRNPTLDVVERFADVLGAEALDLLRVSPDPR
Blast result :ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
462 bp | 153 aa | 68 | 529 | + | No |
Annotation : Hypothetical proteinDescription :
ORF sequence :
MSNDVIPWDADQPNVLHALTRKRAEIAGQIEHNQLTLRHLIAELDHVDATIRIFNPAVDIGAIRSKPVPPRHAAFKGEVTRVVFKTLREATAPVTSRDIA
IRLMNERGLNPDDKELSVIMVKRVCACLRVQKNKGLIRNAESFGNLQGWEAVR
IRLMNERGLNPDDKELSVIMVKRVCACLRVQKNKGLIRNAESFGNLQGWEAVR
Blast result :ORF 2
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
297 bp | 98 aa | 873 | 1169 | + | No |
Annotation : Hypothetical proteinDescription :
ORF sequence :
MPSTTDFQEFLDSEAPDGAQERADLAACASGPDDIGRYSSVIAPNGALIVSGGGETTLALTSPKAKAAFLAILEGEVSEPGATLEGDAEFERSMQKDD
Blast result :ORF 3
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
825 bp | 274 aa | 2636 | 1812 | - | No |
Annotation : Hypothetical proteinDescription :
ORF sequence :
MLVEVPFQLELDGGDASFHAMPAYDGYTSLAGFSLSLSLVANYIETGKIRRRGDFTGRSAVKAFALEEGSVLSKFRVYLDGISALGTSVQIAPEAGKALL
YDTFKRTIDRNLGIEPQPQTAELRHLERTRGGDLEALVAATEPSVRQAHSVIGDGAKVMNIFGGTHQIGSFTPVTKHYVEGFYFDNTVKMRDFSVASFNV
NSGHGGVFDDEIGRVVPFAMKADVLRRVKPIMSWGLDRYANGTGETVTLRYTTVLALDDTVKKYLIQAATRPGI
YDTFKRTIDRNLGIEPQPQTAELRHLERTRGGDLEALVAATEPSVRQAHSVIGDGAKVMNIFGGTHQIGSFTPVTKHYVEGFYFDNTVKMRDFSVASFNV
NSGHGGVFDDEIGRVVPFAMKADVLRRVKPIMSWGLDRYANGTGETVTLRYTTVLALDDTVKKYLIQAATRPGI
Blast result :ORF 4
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
564 bp | 187 aa | 4267 | 3704 | - | No |
Annotation : Hypothetical proteinDescription :
ORF sequence :
MRFAILVTSIFAGVFLAAVWVLRPVPAPKVINSPTAPAPATRQAASVAKPIITSSASDITAGGPVPARVDPEQHTTFDDVHYIPPVGLRQTITVNNEEKS
IWLGRLEKLISAKVGRVVSVSRAWAYKEKDGDTTVCGGYMGASEPILFVYNTGGVKGTTPELYLNVDENTYSSFGCDQSSAAPLIGA
IWLGRLEKLISAKVGRVVSVSRAWAYKEKDGDTTVCGGYMGASEPILFVYNTGGVKGTTPELYLNVDENTYSSFGCDQSSAAPLIGA
Blast result :ORF 6
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
297 bp | 98 aa | 4840 | 4544 | - | No |
Annotation : Hypothetical proteinDescription :
ORF sequence :
MRVAAWNDVAHRIVRIEMVRKGLTYADMVERLRPLGVDDNERNIRNKVARGTFSGVFLIQCLAALGVRTVDLMAYDLPFDADAPDAEVIRQKLISGQG
Blast result :ORF 7
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1068 bp | 355 aa | 4944 | 6011 | + | No |
Chemistry : DDE
ORF sequence :
MRQHFLLSAKARTLGVVEIARMSDDEAYAAFRAVRFADNGGEAYCAHCGCDAVYEYAARRIFKCKACEKQFSLTSGTIFASRKLAIRDILTAIALFVNGA
NGHAALRMGRDLNVSYKTAFVLLHKLREVMGSLKPKEMLTGQVEIDGVWVGGHVKGPNLKIEQKERRRKKAGGEPEYPPKNEAKRFSVVTMRERREGGRS
LSFVFKSESQGVKSVLENVDPAAEVITDGGPHWGQLVLRYANTSQVNHSIGHVIDGVHINGVEGFNSRIRRGERGVHHHIAGRYLQFYADEFAWRDDHRR
VSNGQQFQMVLAAAARHPVSGEWKGFWQRRKAGAPARAPASSASAGRRGERPPPR
NGHAALRMGRDLNVSYKTAFVLLHKLREVMGSLKPKEMLTGQVEIDGVWVGGHVKGPNLKIEQKERRRKKAGGEPEYPPKNEAKRFSVVTMRERREGGRS
LSFVFKSESQGVKSVLENVDPAAEVITDGGPHWGQLVLRYANTSQVNHSIGHVIDGVHINGVEGFNSRIRRGERGVHHHIAGRYLQFYADEFAWRDDHRR
VSNGQQFQMVLAAAARHPVSGEWKGFWQRRKAGAPARAPASSASAGRRGERPPPR
Blast result :ORF 8
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
315 bp | 104 aa | 6499 | 6813 | + | No |
Annotation : Hypothetical proteinDescription :
ORF sequence :
MSCEIDSTRGQESADVSLLVGSVGRNLMADKGDNLRIKYGLVNNPSIALQKQWAALTEALIRQGNTSDAAGRLAAQQLFPEYRQRVYASEGDAIEMLLRQ
INDK
INDK
Blast result :ORF 9
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
522 bp | 173 aa | 6810 | 7331 | + | No |
Annotation : Hypothetical proteinDescription :
ORF sequence :
MTQAIPLWQAMVSLFGVIVVGLIGHMVSVAKLKTELDQKNFENSMRVLETHDAAYRTYTSAMEAYVLAPEPDYEDFMKVVSSGDVYFNQLNLICSTMISG
KVDHNIRDKIWMPKIKVAFEKSLPMHYDTLRNAAKKRGFPYKGELRRRDHESIFAVAEMFSASDAWQRPHEAN
KVDHNIRDKIWMPKIKVAFEKSLPMHYDTLRNAAKKRGFPYKGELRRRDHESIFAVAEMFSASDAWQRPHEAN
Blast result :ORF 10
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
561 bp | 186 aa | 7304 | 7864 | + | No |
Annotation : Hypothetical proteinDescription :
ORF sequence :
MAAPTRSQLAPLPYRLCREGRVMHAIATPPSTVFNWDALSALATLAATLAAIGIALATHMIDSRRRRAASLSALSLAGKIAKDAISFFEAIALQETGSTS
SHRAKFIVGGAPMQELFQNMGEVRLMDLPTSSAIDAYSRVRSHVRSYEKKLEVLINTPGSAGRVGISEHLQGCIAAAAIIEAERKR
SHRAKFIVGGAPMQELFQNMGEVRLMDLPTSSAIDAYSRVRSHVRSYEKKLEVLINTPGSAGRVGISEHLQGCIAAAAIIEAERKR
Blast result :
Comments
ISCausp2 is 65% aa similar to ISNwi4. The transposase is the 7th ORF, others are passenger genes.
References
1] Copeland,A., Lucas,S., Lapidus,A., Barry,K., Glavina del Rio,T., Dalin,E., Tice,H., Pitluck,S., Bruce,D., Goodwin,L., Thompson,L.S., Brettin,T., Detter,J.C., Han,C., Schmutz,J., Larimer,F., Land,M., Hauser,L., Kyrpides,N., Kim,E., Stephens,C. and Richardson,P. (2008) Direct submission GenBank.