IS891

  • Family IS200/IS605
  • Group IS1341
MGE type ISRelated element(s) :
Isoform Synonym(s) IS891N
Accession numberTranspositionOriginHost
M24855 Y Anabaena sp.
Nostoc ellipsosporum CPB 311
Anabaena sp. M-131
Anabaena sp. PCC 7120
DNA section
IS Length : 1352 bp

Ends


Left end : GAGCCGTGAAGCTAAAGCCCCGTATTTTTAATCGGGGGATATAAGCGAATGACCGAATTTATTCGTCGTAACATGGTATAATTACGTCAGAGAGTTTGAC II struct. : Yes
Right end : TTGGGTGAGGTAACTCCTCCAAATAAGTCGAGTCGTGGAAAGAGAAAGCCCAAGAAGTGATTCTTGGAATCCCCGTTTTCTAAACGGGGGAGGATGTCAA II struct. : Yes

Insertion site


Left flankLE cleavage siteRight flankRE cleavage site
TACTTACTTGGGCGtcaa

DNA sequence

GAGCCGTGAAGCTAAAGCCCCGTATTTTTAATCGGGGGATATAAGCGAATGACCGAATTTATTCGTCGTAACATGGTATAATTACGTCAGAGAGTTTGAC
TTAAAAATGCTAGTATTTGAGACAAAACTTGAAGGAACAAACGAGCAGTATCAATTGCTGATGAGGCGATTAAAACTGCTCGTTTTGTCGAATGCTTGCC
TCCGTACTTGGATTGGACAACCAAACATCGGCAGGTATGATTTGAGTGCTTATTGCGCTGTCCTGCTGCCAATGAAAACTTTCCGTTCGTTGCCAAACTC
AACTCTATGGCTCGACAAGCTTCTGCTGAAAGAGCGTGGAGTGCAATTGCTCGGTTTTTTGACAATTGCAAGCAAAACAAAACCGGGAAGAAAGGTTATC
CACGCTTTAAAAAAGAACAGACGCATGGGAGTGTTGAGTATAAAACTAGCGGCTGGAAGCTTAGTAGTGACCGTCGCTTATGTCACTTTTAGCGACGGAT
TTAAAGCAGGAACTTTCAAACTCTGGGGAACTCGTGACTTGCATTTCTACCAGTTGAAACAGTTCAAGAGGGTGCGGGTTGTGCGTCGTGCCGATGGGTA
CTACGCGCAGTTTTGCATTGACCAAGAGCGAGTAGAAAGGCGAGAACCAACGCTTAAAACTATTGGGCTGGATGTGGGATTGAACCATTTCTTGACCGAT
AGCGAAGGCAATACAGTTGAGAACCCTAGACACTTGCGTAAAAGCGAAAAGTCTCTCAAGAGATTGCAACGCAGATTGTCTAAAACCAAGAAGGGTTCTA
ACAACAGAGTCAAGGCAAGAAATCGCTTGAGTAGAAAACACCTTAAAGTAAGTAGGCAGCGTAAAGACTTCGCCGTAAAGTTGGCGAGGTGCGTAGTCCA
GTCTAGCGACTTGGTAGCCTATGAGGATTTGCAGGTGCGGAACATGGTCAGGAATAGACATCTTGCCAAGTCGATTAGTGATGCAGCGTGGACGCAGTTT
CGGCAATGGGTTGAGTATTTCGGCAAAGTGTTTGGTGTAGTGACTGTTGCAGTCCCACCCCATCACACTTCGCAGAATTGTTCCAACTGTGGCGAAGTAG
TGAAAAAGTCGCTGAGTACAAGAACTCATGCTTGCCCTCACTGTGGACATATTCAAGACAGGGATTGGAACGCTGCACGGAACATACTTGAACTAGGACT
ACGTACTGTGGGACACACAGGATCTCAAGTCTCTGGAGATATCGACCTCTGTTTGGGTGAGGTAACTCCTCCAAATAAGTCGAGTCGTGGAAAGAGAAAG
CCCAAGAAGTGATTCTTGGAATCCCCGTTTTCTAAACGGGGGAGGATGTCAA
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1206 bp401 aa1071312+No
ORF function : Accessory Gene
AG : TnpB

ORF sequence :

MLVFETKLEGTNEQYQLLMRRLKLLVLSNACLRTWIGQPNIGRYDLSAYCAVLLPMKTFRSLPNSTLWLDKLLLKERGVQLLGFLTIASKTKPGRKVIHA
LKKNRRMGVLSIKLAAGSLVVTVAYVTFSDGFKAGTFKLWGTRDLHFYQLKQFKRVRVVRRADGYYAQFCIDQERVERREPTLKTIGLDVGLNHFLTDSE
GNTVENPRHLRKSEKSLKRLQRRLSKTKKGSNNRVKARNRLSRKHLKVSRQRKDFAVKLARCVVQSSDLVAYEDLQVRNMVRNRHLAKSISDAAWTQFRQ
WVEYFGKVFGVVTVAVPPHHTSQNCSNCGEVVKKSLSTRTHACPHCGHIQDRDWNAARNILELGLRTVGHTGSQVSGDIDLCLGEVTPPNKSSRGKRKPK
K

 

Blast result :
Comments
Corrected sequence: insert a G between bp 985-986, and read the 1217-1219 triplet ACA instead of CAC (Donadio, 1993).
References
1] Bancroft, I., and Wolk, P. (1989) J. Bacteriol. 171, 5949-5954.
2] Donadio, S., and Staver, M.J. (1993) Gene 126, 147-151.
3] Donadio, S. (1993) Personal communication.
4] Wolk,C.P. (1996) GenBank direct submission.