IS31831

  • Family ISL3
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s) IS-Cg
Accession numberTranspositionOriginHost
D17429 Y Corynebacterium glutamicum
Rhodococcus fascians DSM20131
Corynebacterium herculis DSM20301
Corynebacterium glutamicum ATCC31831
Brevibacterium flavum DSM20411
Brevibacterium lactofermentum ATCC13869-C
Corynebacterium glutamicum ATCC13032
DNA section
IS Length : 1453 bp

Ends


IR Length : 19/24

IRL : GGCCCTTCCGGTTTTGGGGTACATCACAGAACCTGGGCTAGCGGTGTAGA
IRR : GGCTCTTCCTGTTTTAGAGTGCATTGATCTTATGGACCAACTGCCCTGAA

Insertion site


Left flankDirect repeatRight flankDR Length
AACGTCCAGGCCTTTTGCAGAAGAGATA8
TGAGCTAAACGATGATTACACACTGAAA8
NNNNNNNNNNAATAAAGCATCCGAAAAG8
NNNNNNNNNNCCTAAAGGGCCAAACATN8
NNNNNNNNNNCCTTTTGCAGAAGAGATA8
CGATTTCAGGGGATAACCCCAAGACTTT8

DNA sequence

GGCCCTTCCGGTTTTGGGGTACATCACAGAACCTGGGCTAGCGGTGTAGACCCGAAAATAAACGAGCCTTTTGTCAGGGTTAAGGTTTAGGTATCTAAGC
TAACCAAACACCAACAAAAGGCTCTACCCATGAAGTCTACCGGCAACATCATCGCTGACACCATCTGCCGCACTGCGGAACTAGGACTCACCATCACCGG
CGCTTCCGATGCAGGTGATTACACCCTGATCGAAGCAGACGCACTCGACTACACCTCCACCTGCCCAGAATGCTCCCAACCTGGGGTGTTTCGTAATCAC
ACCCACCGGATGCTCATTGATTTACCCATCGTCGGGTTTCCCACCAAACTGTTTATCCGTCTACCTCGCTACCGCTGCACCAACCCCACATGTAAGCAAA
AGTATTTCCAAGCAGAACTAAGCTGCGCTGACCACGGTAAAAAGGTCACCCACCGGGTCACCCGCTGGATTTTACAACGCCTTGCTATTGACCGGATGAG
TGTTCACGCAACCGCGAAAGCACTTGGGCTAGGGTGGGATTTAACCTGCCAACTAGCCCTCGATATGTGCCGTGAGCTGGTCTATAACGATCCTCACCAT
CTTGATGGAGTGTATGTCATTGGGGTGGATGAGCATAAGTGGTCACATAATAGGGCTAAGCATGGTGATGGGTTTGTCACCGTGATTGTCGATATGACCG
GGCATCGGTATGACTCACGGTGTCCTGCCCGGTTATTAGATGTCGTCCCAGGTCGTAGTGCTGATGCTTTACGGTCTTGGCTTGGCTCCCGCGGTGAACA
GTTCCGCAATCAGATACGGATCGTGTCCATGGATGGATTCCAAGGCTACGCCACAGCAAGTAAAGAACTCATTCCTTCTGCTCGTCGCGTGATGGATCCA
TTCCATGTTGTGCGGCTTGCTGGTGACAAGCTCACCGCCTGCCGGCAACGCCTCCAGCGGGAGAAATACCAGCGTCGTGGTTTAAGCCAGGATCCGTTGT
ATAAAAACCGGAAGGCTTTGTTGACCACGCACAAGTGGTTGAGTCCTCGTCAGCAAGAAAGCTTGGAGCAGTTGTGGGCGTATGACAAAGACTACGGGGT
GTTAAAGCTTGCGTGGCTTGCGTATCAGGCGATTATTGATTGTTATCAGATGGGTAATAAGCGTGAAGCGAAAAAGAAAATGCGGACCATTATTGATCAG
CTTCGGGTGTTGAAGGGGCCGAATAAGGAACTCGCGCAGTTGGGTCGTAGTTTGTTTAAACGACTTGGTGATGTGTTGGCGTATTTCGATGTTGGTGTCT
CCAACGGTCCGGTCGAAGCGATCAACGGACGGTTGGAGCATTTGCGTGGGATTGCTCTAGGTTTCCGTAATTTGAACCACTACATTCTGCGGTGCCTTAT
CCATTCAGGGCAGTTGGTCCATAAGATCAATGCACTCTAAAACAGGAAGAGCC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1311 bp436 aa1301440+No
ORF function : Transposase
Chemistry : Unknow

ORF sequence :

MKSTGNIIADTICRTAELGLTITGASDAGDYTLIEADALDYTSTCPECSQPGVFRNHTHRMLIDLPIVGFPTKLFIRLPRYRCTNPTCKQKYFQAELSCA
DHGKKVTHRVTRWILQRLAIDRMSVHATAKALGLGWDLTCQLALDMCRELVYNDPHHLDGVYVIGVDEHKWSHNRAKHGDGFVTVIVDMTGHRYDSRCPA
RLLDVVPGRSADALRSWLGSRGEQFRNQIRIVSMDGFQGYATASKELIPSARRVMDPFHVVRLAGDKLTACRQRLQREKYQRRGLSQDPLYKNRKALLTT
HKWLSPRQQESLEQLWAYDKDYGVLKLAWLAYQAIIDCYQMGNKREAKKKMRTIIDQLRVLKGPNKELAQLGRSLFKRLGDVLAYFDVGVSNGPVEAING
RLEHLRGIALGFRNLNHYILRQLIHSSQLVHKINAL

 

Blast result :
Comments
References