IS31831
- Family ISL3
- Group
Isoform Synonym(s) IS-Cg
Accession number | Transposition | Origin | Host |
---|---|---|---|
D17429 | Y | Corynebacterium glutamicum | Rhodococcus fascians DSM20131 Corynebacterium herculis DSM20301 Corynebacterium glutamicum ATCC31831 Brevibacterium flavum DSM20411 Brevibacterium lactofermentum ATCC13869-C Corynebacterium glutamicum ATCC13032 |
DNA section
IS Length : 1453 bp
Ends
IR Length : 19/24
IRL : GGCCCTTCCGGTTTTGGGGTACATCACAGAACCTGGGCTAGCGGTGTAGA
IRR : GGCTCTTCCTGTTTTAGAGTGCATTGATCTTATGGACCAACTGCCCTGAA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
AACGTCCAGG | CCTTTTGC | AGAAGAGATA | 8 |
TGAGCTAAAC | GATGATTA | CACACTGAAA | 8 |
NNNNNNNNNN | AATAAAGC | ATCCGAAAAG | 8 |
NNNNNNNNNN | CCTAAAGG | GCCAAACATN | 8 |
NNNNNNNNNN | CCTTTTGC | AGAAGAGATA | 8 |
CGATTTCAGG | GGATAACC | CCAAGACTTT | 8 |
DNA sequence
GGCCCTTCCGGTTTTGGGGTACATCACAGAACCTGGGCTAGCGGTGTAGACCCGAAAATAAACGAGCCTTTTGTCAGGGTTAAGGTTTAGGTATCTAAGC
TAACCAAACACCAACAAAAGGCTCTACCCATGAAGTCTACCGGCAACATCATCGCTGACACCATCTGCCGCACTGCGGAACTAGGACTCACCATCACCGG
CGCTTCCGATGCAGGTGATTACACCCTGATCGAAGCAGACGCACTCGACTACACCTCCACCTGCCCAGAATGCTCCCAACCTGGGGTGTTTCGTAATCAC
ACCCACCGGATGCTCATTGATTTACCCATCGTCGGGTTTCCCACCAAACTGTTTATCCGTCTACCTCGCTACCGCTGCACCAACCCCACATGTAAGCAAA
AGTATTTCCAAGCAGAACTAAGCTGCGCTGACCACGGTAAAAAGGTCACCCACCGGGTCACCCGCTGGATTTTACAACGCCTTGCTATTGACCGGATGAG
TGTTCACGCAACCGCGAAAGCACTTGGGCTAGGGTGGGATTTAACCTGCCAACTAGCCCTCGATATGTGCCGTGAGCTGGTCTATAACGATCCTCACCAT
CTTGATGGAGTGTATGTCATTGGGGTGGATGAGCATAAGTGGTCACATAATAGGGCTAAGCATGGTGATGGGTTTGTCACCGTGATTGTCGATATGACCG
GGCATCGGTATGACTCACGGTGTCCTGCCCGGTTATTAGATGTCGTCCCAGGTCGTAGTGCTGATGCTTTACGGTCTTGGCTTGGCTCCCGCGGTGAACA
GTTCCGCAATCAGATACGGATCGTGTCCATGGATGGATTCCAAGGCTACGCCACAGCAAGTAAAGAACTCATTCCTTCTGCTCGTCGCGTGATGGATCCA
TTCCATGTTGTGCGGCTTGCTGGTGACAAGCTCACCGCCTGCCGGCAACGCCTCCAGCGGGAGAAATACCAGCGTCGTGGTTTAAGCCAGGATCCGTTGT
ATAAAAACCGGAAGGCTTTGTTGACCACGCACAAGTGGTTGAGTCCTCGTCAGCAAGAAAGCTTGGAGCAGTTGTGGGCGTATGACAAAGACTACGGGGT
GTTAAAGCTTGCGTGGCTTGCGTATCAGGCGATTATTGATTGTTATCAGATGGGTAATAAGCGTGAAGCGAAAAAGAAAATGCGGACCATTATTGATCAG
CTTCGGGTGTTGAAGGGGCCGAATAAGGAACTCGCGCAGTTGGGTCGTAGTTTGTTTAAACGACTTGGTGATGTGTTGGCGTATTTCGATGTTGGTGTCT
CCAACGGTCCGGTCGAAGCGATCAACGGACGGTTGGAGCATTTGCGTGGGATTGCTCTAGGTTTCCGTAATTTGAACCACTACATTCTGCGGTGCCTTAT
CCATTCAGGGCAGTTGGTCCATAAGATCAATGCACTCTAAAACAGGAAGAGCC
TAACCAAACACCAACAAAAGGCTCTACCCATGAAGTCTACCGGCAACATCATCGCTGACACCATCTGCCGCACTGCGGAACTAGGACTCACCATCACCGG
CGCTTCCGATGCAGGTGATTACACCCTGATCGAAGCAGACGCACTCGACTACACCTCCACCTGCCCAGAATGCTCCCAACCTGGGGTGTTTCGTAATCAC
ACCCACCGGATGCTCATTGATTTACCCATCGTCGGGTTTCCCACCAAACTGTTTATCCGTCTACCTCGCTACCGCTGCACCAACCCCACATGTAAGCAAA
AGTATTTCCAAGCAGAACTAAGCTGCGCTGACCACGGTAAAAAGGTCACCCACCGGGTCACCCGCTGGATTTTACAACGCCTTGCTATTGACCGGATGAG
TGTTCACGCAACCGCGAAAGCACTTGGGCTAGGGTGGGATTTAACCTGCCAACTAGCCCTCGATATGTGCCGTGAGCTGGTCTATAACGATCCTCACCAT
CTTGATGGAGTGTATGTCATTGGGGTGGATGAGCATAAGTGGTCACATAATAGGGCTAAGCATGGTGATGGGTTTGTCACCGTGATTGTCGATATGACCG
GGCATCGGTATGACTCACGGTGTCCTGCCCGGTTATTAGATGTCGTCCCAGGTCGTAGTGCTGATGCTTTACGGTCTTGGCTTGGCTCCCGCGGTGAACA
GTTCCGCAATCAGATACGGATCGTGTCCATGGATGGATTCCAAGGCTACGCCACAGCAAGTAAAGAACTCATTCCTTCTGCTCGTCGCGTGATGGATCCA
TTCCATGTTGTGCGGCTTGCTGGTGACAAGCTCACCGCCTGCCGGCAACGCCTCCAGCGGGAGAAATACCAGCGTCGTGGTTTAAGCCAGGATCCGTTGT
ATAAAAACCGGAAGGCTTTGTTGACCACGCACAAGTGGTTGAGTCCTCGTCAGCAAGAAAGCTTGGAGCAGTTGTGGGCGTATGACAAAGACTACGGGGT
GTTAAAGCTTGCGTGGCTTGCGTATCAGGCGATTATTGATTGTTATCAGATGGGTAATAAGCGTGAAGCGAAAAAGAAAATGCGGACCATTATTGATCAG
CTTCGGGTGTTGAAGGGGCCGAATAAGGAACTCGCGCAGTTGGGTCGTAGTTTGTTTAAACGACTTGGTGATGTGTTGGCGTATTTCGATGTTGGTGTCT
CCAACGGTCCGGTCGAAGCGATCAACGGACGGTTGGAGCATTTGCGTGGGATTGCTCTAGGTTTCCGTAATTTGAACCACTACATTCTGCGGTGCCTTAT
CCATTCAGGGCAGTTGGTCCATAAGATCAATGCACTCTAAAACAGGAAGAGCC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1311 bp | 436 aa | 130 | 1440 | + | No |
Chemistry : Unknow
ORF sequence :
MKSTGNIIADTICRTAELGLTITGASDAGDYTLIEADALDYTSTCPECSQPGVFRNHTHRMLIDLPIVGFPTKLFIRLPRYRCTNPTCKQKYFQAELSCA
DHGKKVTHRVTRWILQRLAIDRMSVHATAKALGLGWDLTCQLALDMCRELVYNDPHHLDGVYVIGVDEHKWSHNRAKHGDGFVTVIVDMTGHRYDSRCPA
RLLDVVPGRSADALRSWLGSRGEQFRNQIRIVSMDGFQGYATASKELIPSARRVMDPFHVVRLAGDKLTACRQRLQREKYQRRGLSQDPLYKNRKALLTT
HKWLSPRQQESLEQLWAYDKDYGVLKLAWLAYQAIIDCYQMGNKREAKKKMRTIIDQLRVLKGPNKELAQLGRSLFKRLGDVLAYFDVGVSNGPVEAING
RLEHLRGIALGFRNLNHYILRQLIHSSQLVHKINAL
DHGKKVTHRVTRWILQRLAIDRMSVHATAKALGLGWDLTCQLALDMCRELVYNDPHHLDGVYVIGVDEHKWSHNRAKHGDGFVTVIVDMTGHRYDSRCPA
RLLDVVPGRSADALRSWLGSRGEQFRNQIRIVSMDGFQGYATASKELIPSARRVMDPFHVVRLAGDKLTACRQRLQREKYQRRGLSQDPLYKNRKALLTT
HKWLSPRQQESLEQLWAYDKDYGVLKLAWLAYQAIIDCYQMGNKREAKKKMRTIIDQLRVLKGPNKELAQLGRSLFKRLGDVLAYFDVGVSNGPVEAING
RLEHLRGIALGFRNLNHYILRQLIHSSQLVHKINAL
Blast result :
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References