IS231W

  • Family IS4
  • Group IS231
MGE type ISRelated element(s) :
Isoform IS231VSynonym(s)
Accession numberTranspositionOriginHost
M86926 ND Bacillus thuringiensis
Bacillus thuringiensis subsp. israelensis plasmid p112kb
DNA section
IS Length : 1964 bp

Ends


IR Length : 21/22

IRL : CATCGCCATCAAGCTAAGGAAAAGGAGATACCCCCAAACCGAATAAAATA
IRR : CATCGCCATCAAGCTAACGAAATTGAACTTACAAAAATACGTATAAATTC

Insertion site


Left flankDirect repeatRight flankDR Length

DNA sequence

CATCGCCATCAAGCTAAGGAAAAGGAGATACCCCCAAACCGAATAAAATAGGGGTATCTCTTTTTATATATCTAACTCTATTTCTTTGCTCATGCAACAG
AACTTATATTTCTTTCCACTGTTACAAGCACATGTATCATATATATCCATTGACGTGTCCGTCCTTTCATCGCTTTTTTCAAATCTGTTAGATCTTCATT
TAATTCTAAACTAATGATGTAATACAAATCATAATCATCACAAATTGCTGCTATTTTTTCTGCTCGTGCTCTTGTTCCTACTTTTATCATAATCGGATTC
TTTTCTGAACCTAATAGACACATAAGCTTTCACCTCTTTTCTTTTTATCTTCATTTTATAAAATAAAGATAAAAATGGAGGGGAATCCATGAAAAAATCA
TCTCATTTTAAAGACTTTCGTTTACTTGTAAAAGAATTACAGCGTGTATTTTCATCACACTTTTTAACACATTTGGGGAAAGAAACACAGTTTGTTCAAC
GTACCAGTAAATTTGGAGCACAAGATTTAGCTGCTTTATGCATAGGAATGGGCCAAGATATTGCAAGTTATTCTTTGACAAGACTATGTGGTGTTTTAGA
ATCAGAAACAGGTGTCCTTATTAGTCCGGAAGGACTAAATGTACGATTAAACGAAAAAGCAGTAGAATTTTTACGTTCGCTCTTCTCGCAACTCTTACAA
AAACAATTATTAGCCACTATATCTCTACCTTCTTCTTTTTCAGAATACTTTCGGCGTATTCGTATTTTAGATGCCACTACATTTCAAATTTCAGATCAAC
TCGCAGCCGTTTATCCTGGTTCAGGCGGAAGTGGAAAAGCTTCTGGAGTGAAAATACAATTAGAATATGATTTACTGAGTGGTCAATTCTTACATGTTGC
ATTGGGACCTGCGAAAGAAAATGATGTGAATTACGGCAAAGAAGTTCAACCTACCGTTGATTTACAAGATCTTTGTATACGGGATTTAGGTTATTTTAGT
TTGATCGATCTAGATGGCATCCAACAAAAAGGAGCCTACTATTTATCTCGGCTTAAAATGAATACCAAACTGTTTCAAAAAATGAAGAGGCCCCTATTTT
TAAAAATGGAGCAAGTAAAAAAAAATATCAATATACAATGATTGATTTAGAAACGATTATGGAACAGTTACAACCAGGGGAATTATATGAAATTCCTGTT
GTCTATGTTGGGCGTGACTATCTACTTCCCGTAAGAGCTGTAATGTATAGGCTTACTCCTGATCAGGAAACACAACGTAGAAAAGATCGAGCATACAAAG
AAAAAAAGAAAAACATAACGTTTAGTGATCGAACAAAAAAATTACAAGGCATCAATGTATACATTACGAATATTCCATTGGAATATGTTTCTAAAGAAGC
TATCCATGAGTTCTACTCTCTTCGTTGGCAAATAGAAATTATCTTTAAAACATGGAAATCTATTTTTCGCATTCATTCCAATACAAATGTGAAGAAAGAA
CGATTAGAATGTCATATCTATGGAAAATTAATTGCTCTTTTACTCTCTTCTACTGTGATGTTCCAAATGAGACAAGTATTGCTGATAAAAAAACAAAAAG
AATTAAGTGAATGGAAAGCTATGTATATGATTCATGATTATTTCCGCGTATTATATCGACAAATACAAGAACAATCGAAGCAACTAATAACAAGTTTTCT
TCGTTTATTCCACTTACTTGATAAAAATGGACGAAAATCACATCGTTATCGAAAAAAAACTGTATTTGATATTTTAGGTACTGCATACGAGCAGTATATA
GAAAAATAAATCCGCTTAAAAAAATTGTAGCCCGCTAGGGTTATTTCGTATGCACTTTTTTATAAAAAATTTTAATATTGGGTAAAAGATACCCAATATT
CCATAGTCGGAGAGGAATTTATACGTATTTTTGTAAGTTCAATTTCGTTAGCTTGATGGCGATG
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
753 bp250 aa3891141+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MKKSSHFKDFRLLVKELQRVFSSHFLTHLGKETQFVQRTSKFGAQDLAALCIGMGQDIASYSLTRLCGVLESETGVLISPEGLNVRLNEKAVEFLRSLFS
QLLQKQLLATISLPSSFSEYFRRIRILDATTFQISDQLAAVYPGSGGSGKASGVKIQLEYDLLSGQFLHVALGPAKENDVNYGKEVQPTVDLQDLCIRDL
GYFSLIDLDGIQQKGAYYLSRLKMNTKLFQKMKRPLFLKMEQVKKNINIQ

 

Blast result :
Comments
References