IS1655

  • Family IS30
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
AJ278708 ND Neisseria meningitidis
Neisseria meningitidis
DNA section
IS Length : 1080 bp

Ends


IR Length : 20/25

IRL : GGCGGATTCGCATTTGAAGTGCAACTTTCCCTAACAGAAAAAGGCCAGTA
IRR : CTTGGATTCGGATTTCAAGTGCAACACTAGTGTATTAGTGGTTGGAACAG

Insertion site


Left flankDirect repeatRight flankDR Length
TTCACAACCGATTAAA3

DNA sequence

GGCGGATTCGCATTTGAAGTGCAACTTTCCCTAACAGAAAAAGGCCAGTATGCGGTAGCATACGACCTTTCCTGCAAGAAAGATTGCCATGAGCTACACG
CAACTGACCCAAGGCGAACGATACCACATCCAATACCTGTCCCGCCACTGCACCGTCACCGAAATCGCCAAACAGCTGAACCGCCACAAAAGCACCATCA
GCCGCGAAATCAGACGGCACCGCACCCAAGGGCAGCAATACAGCGCCGAAAAAGCCCAGCGGCAAAGCCGGACTATCAAACAGCGTAAGCGACAACCCTA
TAAGCTCGATTCGCAGCTGATTCAGCACATCGACACCCTTATCCGCCGCAAACTCAGTCCCGAACAAGTATGCGCCTACCTGTGCAAACACCACCGGATC
ACGCTCCACCACAGCACCATTTACCGCTACCTTCGCCAAGACAAAAGCAACGGCAGCACGTTGTGGCAACATCTCAGAATATGCAGCAAACCCTACCGCA
AACGCTACGGCAGCACATGGACCAGAGGCAAAGTCCCCAACCGTGTCGGCATAGAAAACCGACCCGCTATCGTCGACCAGAAATCCCGTATCGGCGATTG
GGAAGCCGACACCATTGTCGGCAAAGGACAGAAAAGCGCATTATTGACCTTGGTCGAACGCGTTACCCGCTACACCATCATCTGCAAATTGGATAGCCTC
AAAGCCGAAGACACTGCCCGGGCAGCTGTTAGGGCATTAAAGGCACATAAAGACAGGGTGCACACCATTACCATGGATAACGGCAAAGAGTTCTACCAAC
ACACCAAAATAACCAAAGCATTGAAAGCGGAGACTTATTTTTGTCGCCCTTACCATTCTTGGGAGAAAGGGCTGAATGAGAACACCAACGGACTCATCCG
GCAATACTTCCCCAAACAAACCGATTTCCGTAACATCAGTGATCGGGAGATACGCAGGGTTCAAGATGAGTTGAACCACCGACCAAGAAAAACACTTGGC
TACGAAACGCCAAGTGTTTTATTCTTGAATCTGTTCCAACCACTAATACACTAGTGTTGCACTTGAAATCCGAATCCAAG
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
966 bp321 aa891054+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MSYTQLTQGERYHIQYLSRHCTVTEIAKQLNRHKSTISREIRRHRTQGQQYSAEKAQRQSRTIKQRKRQPYKLDSQLIQHIDTLIRRKLSPEQVCAYLCK
HHRITLHHSTIYRYLRQDKSNGSTLWQHLRICSKPYRKRYGSTWTRGKVPNRVGIENRPAIVDQKSRIGDWEADTIVGKGQKSALLTLVERVTRYTIICK
LDSLKAEDTARAAVRALKAHKDRVHTITMDNGKEFYQHTKITKALKAETYFCRPYHSWEKGLNENTNGLIRQYFPKQTDFRNISDREIRRVQDELNHRPR
KTLGYETPSVLFLNLFQPLIH

 

Blast result :
Comments
IS1655 is 61% aa similar to IS4351.
References
1] Claus,H., Stoevesandt,J., Frosch,M. and Vogel,U. (2001) JOURNAL J. Bacteriol. 183 (8), 2570-2575
2] Kiss J, Nagy Z, Toth G, Kiss GB, Jakab J, Chandler M, Olasz F.(2007) Mol Microbiol. 63(6):1731-47