IS1655
- Family IS30
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
AJ278708 | ND | Neisseria meningitidis | Neisseria meningitidis |
DNA section
IS Length : 1080 bp
Ends
IR Length : 20/25
IRL : GGCGGATTCGCATTTGAAGTGCAACTTTCCCTAACAGAAAAAGGCCAGTA
IRR : CTTGGATTCGGATTTCAAGTGCAACACTAGTGTATTAGTGGTTGGAACAG
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
TTCAC | AAC | CGATTAAA | 3 |
DNA sequence
GGCGGATTCGCATTTGAAGTGCAACTTTCCCTAACAGAAAAAGGCCAGTATGCGGTAGCATACGACCTTTCCTGCAAGAAAGATTGCCATGAGCTACACG
CAACTGACCCAAGGCGAACGATACCACATCCAATACCTGTCCCGCCACTGCACCGTCACCGAAATCGCCAAACAGCTGAACCGCCACAAAAGCACCATCA
GCCGCGAAATCAGACGGCACCGCACCCAAGGGCAGCAATACAGCGCCGAAAAAGCCCAGCGGCAAAGCCGGACTATCAAACAGCGTAAGCGACAACCCTA
TAAGCTCGATTCGCAGCTGATTCAGCACATCGACACCCTTATCCGCCGCAAACTCAGTCCCGAACAAGTATGCGCCTACCTGTGCAAACACCACCGGATC
ACGCTCCACCACAGCACCATTTACCGCTACCTTCGCCAAGACAAAAGCAACGGCAGCACGTTGTGGCAACATCTCAGAATATGCAGCAAACCCTACCGCA
AACGCTACGGCAGCACATGGACCAGAGGCAAAGTCCCCAACCGTGTCGGCATAGAAAACCGACCCGCTATCGTCGACCAGAAATCCCGTATCGGCGATTG
GGAAGCCGACACCATTGTCGGCAAAGGACAGAAAAGCGCATTATTGACCTTGGTCGAACGCGTTACCCGCTACACCATCATCTGCAAATTGGATAGCCTC
AAAGCCGAAGACACTGCCCGGGCAGCTGTTAGGGCATTAAAGGCACATAAAGACAGGGTGCACACCATTACCATGGATAACGGCAAAGAGTTCTACCAAC
ACACCAAAATAACCAAAGCATTGAAAGCGGAGACTTATTTTTGTCGCCCTTACCATTCTTGGGAGAAAGGGCTGAATGAGAACACCAACGGACTCATCCG
GCAATACTTCCCCAAACAAACCGATTTCCGTAACATCAGTGATCGGGAGATACGCAGGGTTCAAGATGAGTTGAACCACCGACCAAGAAAAACACTTGGC
TACGAAACGCCAAGTGTTTTATTCTTGAATCTGTTCCAACCACTAATACACTAGTGTTGCACTTGAAATCCGAATCCAAG
CAACTGACCCAAGGCGAACGATACCACATCCAATACCTGTCCCGCCACTGCACCGTCACCGAAATCGCCAAACAGCTGAACCGCCACAAAAGCACCATCA
GCCGCGAAATCAGACGGCACCGCACCCAAGGGCAGCAATACAGCGCCGAAAAAGCCCAGCGGCAAAGCCGGACTATCAAACAGCGTAAGCGACAACCCTA
TAAGCTCGATTCGCAGCTGATTCAGCACATCGACACCCTTATCCGCCGCAAACTCAGTCCCGAACAAGTATGCGCCTACCTGTGCAAACACCACCGGATC
ACGCTCCACCACAGCACCATTTACCGCTACCTTCGCCAAGACAAAAGCAACGGCAGCACGTTGTGGCAACATCTCAGAATATGCAGCAAACCCTACCGCA
AACGCTACGGCAGCACATGGACCAGAGGCAAAGTCCCCAACCGTGTCGGCATAGAAAACCGACCCGCTATCGTCGACCAGAAATCCCGTATCGGCGATTG
GGAAGCCGACACCATTGTCGGCAAAGGACAGAAAAGCGCATTATTGACCTTGGTCGAACGCGTTACCCGCTACACCATCATCTGCAAATTGGATAGCCTC
AAAGCCGAAGACACTGCCCGGGCAGCTGTTAGGGCATTAAAGGCACATAAAGACAGGGTGCACACCATTACCATGGATAACGGCAAAGAGTTCTACCAAC
ACACCAAAATAACCAAAGCATTGAAAGCGGAGACTTATTTTTGTCGCCCTTACCATTCTTGGGAGAAAGGGCTGAATGAGAACACCAACGGACTCATCCG
GCAATACTTCCCCAAACAAACCGATTTCCGTAACATCAGTGATCGGGAGATACGCAGGGTTCAAGATGAGTTGAACCACCGACCAAGAAAAACACTTGGC
TACGAAACGCCAAGTGTTTTATTCTTGAATCTGTTCCAACCACTAATACACTAGTGTTGCACTTGAAATCCGAATCCAAG
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
966 bp | 321 aa | 89 | 1054 | + | No |
Chemistry : DDE
ORF sequence :
MSYTQLTQGERYHIQYLSRHCTVTEIAKQLNRHKSTISREIRRHRTQGQQYSAEKAQRQSRTIKQRKRQPYKLDSQLIQHIDTLIRRKLSPEQVCAYLCK
HHRITLHHSTIYRYLRQDKSNGSTLWQHLRICSKPYRKRYGSTWTRGKVPNRVGIENRPAIVDQKSRIGDWEADTIVGKGQKSALLTLVERVTRYTIICK
LDSLKAEDTARAAVRALKAHKDRVHTITMDNGKEFYQHTKITKALKAETYFCRPYHSWEKGLNENTNGLIRQYFPKQTDFRNISDREIRRVQDELNHRPR
KTLGYETPSVLFLNLFQPLIH
HHRITLHHSTIYRYLRQDKSNGSTLWQHLRICSKPYRKRYGSTWTRGKVPNRVGIENRPAIVDQKSRIGDWEADTIVGKGQKSALLTLVERVTRYTIICK
LDSLKAEDTARAAVRALKAHKDRVHTITMDNGKEFYQHTKITKALKAETYFCRPYHSWEKGLNENTNGLIRQYFPKQTDFRNISDREIRRVQDELNHRPR
KTLGYETPSVLFLNLFQPLIH
Blast result :
Comments
IS1655 is 61% aa similar to IS4351.
References
1] Claus,H., Stoevesandt,J., Frosch,M. and Vogel,U. (2001) JOURNAL J. Bacteriol. 183 (8), 2570-2575
2] Kiss J, Nagy Z, Toth G, Kiss GB, Jakab J, Chandler M, Olasz F.(2007) Mol Microbiol. 63(6):1731-47
2] Kiss J, Nagy Z, Toth G, Kiss GB, Jakab J, Chandler M, Olasz F.(2007) Mol Microbiol. 63(6):1731-47