IS1490

  • Family IS256
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
U80795 ND Burkholderia cepacia
Burkholderia cepacia AC1100
DNA section
IS Length : 1433 bp

Ends


IR Length : 19/25

IRL : GAGATAAGCTCGATTCTGGTGTACGGGGAAGTTTGAGTGCGAGGGATTGA
IRR : GAGATATAGTCAAGACTGGTGTACGAGCAGTTTGATGAGCAGCGATTTCA

Insertion site


Left flankDirect repeatRight flankDR Length

DNA sequence

GAGATAAGCTCGATTCTGGTGTACGGGGAAGTTTGAGTGCGAGGGATTGAAGGCGGTGGAGGTTTTAGCTGAGAATCTGATTGTCGAAGTCGGAAACTAG
CGAACAACAAACCATCCACCATGAGCAAGTTTACAGAAAAAGAAGTCGTTGGACTATCAGGCATCGGTCTGGGGCTGGACGAATTGGTTCGTCACGGAGC
TCGGCAGGTGATCCAGCAGGCAATCGAGGCGGAGCTGTCGTCGCTGCTGGAGCGCTTCGAGAACGTCAAGACCATGCATGGGCGACGCGCCGTGGTGCGC
AACGGCTATTTGCCGGAACGCGAAGTGTTGACAGCCGCCGGACCGATCGCGGTGAAGGTCCCCAAGGTTCGAGATCGTTCGGGAGCAGGCGTGAAATTCA
ATTCATCGATTGTGCCGCCCTATGTGAGGAAGTCGCCGCGCGTGAGTGCAGCGCTGCCCTGGCTGTATTTGAAGGGCATCTCGACGGGTGACATGAGCGA
GGCGCTGAGCGTGTTGCTGGGTGAGGACGCCAAAGGCTTGTCGGCGAACGTGGTGAGCCGCCTGAAGGCGCAATGGGCCGACGAGCATGCCAACTGGAGT
CGGCGCGAGCTATCGAAGTCACGCTATGTTTATTGGTGGGTCGACGGCATTCATACGGGTCTGCGCAGCGAGAATTCAGATGGGCAGTGCCTATTGGTCA
TCATCGGCGTGACGCCCGAGGGGAAGAAGGAACGTGTGGCGATCGGTGACGGGTATCGGGAGTCGAAAGCCTCGTGGCAGGAGCTCTTGCTTGATCTGAA
TGCGCGTGGCTTGCAGACGGGGCCCTTGCTGGCGGTCGGTGACGGTGCCATGGGTTTCTGGGCCGCGTTGGAAGAAGTATTTCCGGCGACGCGCGCTCAG
CGCTGCTGGTTTCACAAGATGGGCAACGTGCTCAACGCGATGCCGAAGTCGCTACAGGGTCGGGCCAAGGCGGATCTGCAGGCGATCTGGATGGCCGCGA
CACGCGCTGATGCCTATGCCGCGTTCGACCGGTTCGTGGCAATCCACGCGGCCAAGTATCCAAAGGCGACGGACACGCTGAAGAAGGATCGCGAAAGCTT
GCTCGCGTTCTACGACTTTCCCGCTGAGCACTGGCAGCATTTGCGAACGACCAATGCGATCGAGTCGACGTTTGCGACGGTACGTCACCGTACTACGCGT
ACGCGCAACTGCGTATCGCGACCCACCTTCCTGGGTCTGGCATTCAAGCTGATCGAGGAAGCCGAGAAAACCTGGCGCCGCATCAACGGCCCCGAACAGA
TCAAGCTGTTACTGGAGGGCATTGCATTCAGAGACGGTGAACCGGTGCAAGACGATCGACCGGATCAGCAGAAACTCGCCGCTTGAAATCGCTGCTCATC
AAACTGCTCGTACACCAGTCTTGACTATATCTC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1266 bp421 aa1211386+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MSKFTEKEVVGLSGIGLGLDELVRHGARQVIQQAIEAELSSLLERFENVKTMHGRRAVVRNGYLPEREVLTAAGPIAVKVPKVRDRSGAGVKFNSSIVPP
YVRKSPRVSAALPWLYLKGISTGDMSEALSVLLGEDAKGLSANVVSRLKAQWADEHANWSRRELSKSRYVYWWVDGIHTGLRSENSDGQCLLVIIGVTPE
GKKERVAIGDGYRESKASWQELLLDLNARGLQTGPLLAVGDGAMGFWAALEEVFPATRAQRCWFHKMGNVLNAMPKSLQGRAKADLQAIWMAATRADAYA
AFDRFVAIHAAKYPKATDTLKKDRESLLAFYDFPAEHWQHLRTTNAIESTFATVRHRTTRTRNCVSRPTFLGLAFKLIEEAEKTWRRINGPEQIKLLLEG
IAFRDGEPVQDDRPDQQKLAA

 

Blast result :
Comments
References