KIS

  • Family ISNCY
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
L29226 ND Lactobacillus delbrueckii
Lactobacillus delbrueckii subsp. lactis bacteriophage LL-K
DNA section
IS Length : 1543 bp

Ends


IR Length : 0

IRL : AGGAGATGAATCATTGTGAGGGCTCTATATCTTGCCGACGGCAATGGCCG
IRR : ATTGGCCCCCGTTAAGCTGATCGAACAACGGCTCCTACGTCTTCTGGTGC

Insertion site


Left flankDirect repeatRight flankDR Length
GGAGACGGGCGATGACAAAAC/TCGAAGAAAGTAGTAACCAA22

DNA sequence

AGGAGATGAATCATTGTGAGGGCTCTATATCTTGCCGACGGCAATGGCCGGTTCAAATTTGCCGATACCACAACAGAAATCCGTTTGAATGCTTTTGATG
ATGGTAGCCCAGCAACTTTAGCAGCAGATGCAAAGGTAAGAATCAAAAATGGCTCCGGATATTTGCTGGAGGTAAGTGCCAGTGTCACGAACAATCAAGC
AGTTATTACTAGCGGACAACTGAGCCAATTGCCAGCCGGAAGCTATCTGATTGAGCTGTGGGACACCGTAGACGGTGGTACTGCGATCTATCCTAGTGAA
GGATTTTTGGCACTTCAAATTAACGATAACGCCACCGGCCTCTCTGGCGGACTAGTCAGCAGTATCACGGTTGATGATTTTGTTAAACAGTTCAGTGACC
TTAGTCAGCAACTTAAAAAGGAAGTTTCTGATGCTGTGGCAAATGGTCTGAAGGGCGATAAGGGTGACGATGGGCTATCTGCCTATCAAGTAGCAGTTAT
TAATGGTTATAAGGGTTCACAAACGGACTGGCTTGCCTCTTTAGTTGGTCCTAAAGGTGACAAGGGCGATAAAGGCGATCCGGGTAAAGACTTTCGAATT
GTAAAGACGTTCCCATCCATTGCTGCAATGAATGGCGATGGCTTCTCTGATGGTGATTTCACCATGATTGCCAGTGACGTCAACGACCCAGATGATGGCA
AACTCTACGTATGGAATGGCAGCAGCTTCACATTTGTTGCCGATTTAAGCGGTTCTCAAGGTATCAAAGGTGAAAAGGGCGATAAAGGCGAAAAGGGTGA
CAAAGGCGATAAAGGCGATCAAGGGTTTTCTGCTTATCAAGTTGCCGTTAATGCCGGCTTCTCTGGCGGCGTTAATGACTGGCTTGCTTCTCTAGTTGGT
CCTAAAGGGGACAAGGGTGATAAGGGTGAAAGAGGTGATGCCGGTATCCATGTCATCACCCAAGCAGAGTATGATGTGCTAAATGACAAGTCTGGTGTCT
ACTTCATTGAGGGGTGATGAATATGCCGACAATTAATGGTAAAGTATGTGTTGTTAATGGCAAGCCGGTAGACAAGGTTTACAGCAATGGCAAGCAAGTA
TATGGTAGAAATCTTCTTGTGGGGATTGATAAGGCTATTCACCAAGCTTCCACCTGGATTCAATTGGTAGCAACCATTCCTGCAAAATCCATCGGAATGG
GACAGCATTTATGCTTTTCAGCGTTTATTAACAACGCCCCTTATGTAAAATACAACATTCATGGTAGCTCTTATTGTTCTATCCAAGCAATAGATTCATC
TGGTAACATCCTTTTGGAACAACGGGGCAATGCAGTAAATTTCGATGCTGATGGTATTAGCCAAGTAAGCCTAGTCGTTCCCGATAAGACAGACTCTATT
TCGCTATTTATTTATACTGACTGGATGGATCAAAACACATACTACGGTTACCCAAAGCTTGAAATAGGCACCGTAGCTACCCCGTGGACACCGGCACCAG
AAGACGTAGGAGCCGTTGTTCGATCAGCTTAACGGGGGCCAAT
Protein section
ORF number : 2

 

ORF 1
LengthBeginEndStrandFusion ORF
1002 bp333 aa161017+No

ORF sequence :

MRALYLADGNGRFKFADTTTEIRLNAFDDGSPATLAADAKVRIKNGSGYLLEVSASVTNNQAVITSGQLSQLPAGSYLIELWDTVDGGTAIYPSEGFLAL
QINDNATGLSGGLVSSITVDDFVKQFSDLSQQLKKEVSDAVANGLKGDKGDDGLSAYQVAVINGYKGSQTDWLASLVGPKGDKGDKGDPGKDFRIVKTFP
SIAAMNGDGFSDGDFTMIASDVNDPDDGKLYVWNGSSFTFVADLSGSQGIKGEKGDKGEKGDKGDKGDQGFSAYQVAVNAGFSGGVNDWLASLVGPKGDK
GDKGERGDAGIHVITQAEYDVLNDKSGVYFIEG

 

Blast result :
ORF 2
LengthBeginEndStrandFusion ORF
516 bp171 aa10171532+No

ORF sequence :

MNMPTINGKVCVVNGKPVDKVYSNGKQVYGRNLLVGIDKAIHQASTWIQLVATIPAKSIGMGQHLCFSAFINNAPYVKYNIHGSSYCSIQAIDSSGNILL
EQRGNAVNFDADGISQVSLVVPDKTDSISLFIYTDWMDQNTYYGYPKLEIGTVATPWTPAPEDVGAVVRSA

 

Blast result :
Comments
Note : this is a putative IS. KIS was isolated in bacteriophage LL-K, it is not present in the original host Lactobacillus delbrueckii subsp. Lactis genome.
ORF1 shows significant homology to MIS (accession number : L41843) of bacteriophage mv4 of Lactobacillus delbrueckii.
References
1] Forsman,P. and Alatossava,T.(1994) Arch. Virol. 137, 43-54