ISRm7

  • Family IS3
  • Group IS407
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
L76274 Rhizobium meliloti
Rhizobium meliloti plasmid pRmJT5
DNA section
IS Length : 912 bp

Ends


IR Length :

IRL : N
IRR : N

Insertion site


Left flankDirect repeatRight flankDR Length

DNA sequence

GCATGCGGCCGTTGCACCTCTCGACATAGCCGTGTCTCACATCGGCTTTCCCGGTGCGATGTAGTGCCACTCGACCTTGTGCGCCTTCGATCAGGCAAGG
ATGGCTTCCGAGGTGAACTCCATGCCATGATCGGAGACGATCATGCCAGGTTTCCCGCGCCGTTCAAGGAGCGCCGTCACCTCCCGTGCTACACGACGCC
GGGCGATCGAGGTGTCTGGGATCGCTGCCAGACATTCGCGTGTCACGTCATCGACGATGTAGAGCACACGGAACCTCCTTCCGCAGGCGAACTGGTCGTG
TACGAAATCCAGCGACCAGCGGGCATTGGTTTTAGCCTTGACGAGGATCGGCGGACGCGTGCCGACGGCACGCCGTCTGGCTTCCGTTTGCGAACCGAAA
GCGCTTCTTGCGGTACAGCCGATAGACGCGGTTGACCCCGGACGGCTCTTCTCCCGCCTGAGCAGGACGAACAGCCGCCGATAGCCGAAGCGCCGTCGCT
CGTTGGCGAGCTCTCGCAGTCTCGCTCGCAGTTCGACCTCCGGCGGTCGGCAAGACCGATAGCGCACCATCTTCCGATCAGCGGATATGATCTGGCAGGC
CCGCCGCTCCGAGAGGCCCATGACGGTCTTCAGATGGGCGACGGCTTCACGCCTGGCGGCAGGCCGTAACATTGAAGAAGCTCGCGGAGTGCGGCGGCAC
CCAGCATCTGCCCGGACAGCATCTTCTTCAGCTTGGCGTTCTCCTCTTCGAGCGCCTTCAGGCGCTTCGCCTCGGAAACCTCCATGCCGCCGTGTTTGGC
TTTCCAGTTGTAAAAGGTCGCTTCCGAAATCCCGTGCTTGCGGCAGAGCTCAGCCACCTTCGCACGGCCCCCTGCACCTTCAGCATGCAATAATCTGCTC
TTCCGTAGATCT
Protein section
ORF number : 0

 

Comments
ISRm7 is located between the syrM (regulatory gene of nodD3 and syrA) and nodD3 (regulatory gene of syrM and nod regulon genes such as nodABC) genes (Barnett et al., 1996). ISRm7 is a 912-bp relic element 88 % identical to ISRm6 (from position 75 to 989).
References
1] Barnett, M.J., Rushing, B.G., Fisher, R.F., and Long, S.R. (1996) J. Bacteriol. 178, 1782-1787.