ISRm7
- Family IS3
- Group IS407
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
L76274 | Rhizobium meliloti | Rhizobium meliloti plasmid pRmJT5 |
DNA section
IS Length : 912 bp
Ends
IR Length :
IRL : N
IRR : N
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|
DNA sequence
GCATGCGGCCGTTGCACCTCTCGACATAGCCGTGTCTCACATCGGCTTTCCCGGTGCGATGTAGTGCCACTCGACCTTGTGCGCCTTCGATCAGGCAAGG
ATGGCTTCCGAGGTGAACTCCATGCCATGATCGGAGACGATCATGCCAGGTTTCCCGCGCCGTTCAAGGAGCGCCGTCACCTCCCGTGCTACACGACGCC
GGGCGATCGAGGTGTCTGGGATCGCTGCCAGACATTCGCGTGTCACGTCATCGACGATGTAGAGCACACGGAACCTCCTTCCGCAGGCGAACTGGTCGTG
TACGAAATCCAGCGACCAGCGGGCATTGGTTTTAGCCTTGACGAGGATCGGCGGACGCGTGCCGACGGCACGCCGTCTGGCTTCCGTTTGCGAACCGAAA
GCGCTTCTTGCGGTACAGCCGATAGACGCGGTTGACCCCGGACGGCTCTTCTCCCGCCTGAGCAGGACGAACAGCCGCCGATAGCCGAAGCGCCGTCGCT
CGTTGGCGAGCTCTCGCAGTCTCGCTCGCAGTTCGACCTCCGGCGGTCGGCAAGACCGATAGCGCACCATCTTCCGATCAGCGGATATGATCTGGCAGGC
CCGCCGCTCCGAGAGGCCCATGACGGTCTTCAGATGGGCGACGGCTTCACGCCTGGCGGCAGGCCGTAACATTGAAGAAGCTCGCGGAGTGCGGCGGCAC
CCAGCATCTGCCCGGACAGCATCTTCTTCAGCTTGGCGTTCTCCTCTTCGAGCGCCTTCAGGCGCTTCGCCTCGGAAACCTCCATGCCGCCGTGTTTGGC
TTTCCAGTTGTAAAAGGTCGCTTCCGAAATCCCGTGCTTGCGGCAGAGCTCAGCCACCTTCGCACGGCCCCCTGCACCTTCAGCATGCAATAATCTGCTC
TTCCGTAGATCT
ATGGCTTCCGAGGTGAACTCCATGCCATGATCGGAGACGATCATGCCAGGTTTCCCGCGCCGTTCAAGGAGCGCCGTCACCTCCCGTGCTACACGACGCC
GGGCGATCGAGGTGTCTGGGATCGCTGCCAGACATTCGCGTGTCACGTCATCGACGATGTAGAGCACACGGAACCTCCTTCCGCAGGCGAACTGGTCGTG
TACGAAATCCAGCGACCAGCGGGCATTGGTTTTAGCCTTGACGAGGATCGGCGGACGCGTGCCGACGGCACGCCGTCTGGCTTCCGTTTGCGAACCGAAA
GCGCTTCTTGCGGTACAGCCGATAGACGCGGTTGACCCCGGACGGCTCTTCTCCCGCCTGAGCAGGACGAACAGCCGCCGATAGCCGAAGCGCCGTCGCT
CGTTGGCGAGCTCTCGCAGTCTCGCTCGCAGTTCGACCTCCGGCGGTCGGCAAGACCGATAGCGCACCATCTTCCGATCAGCGGATATGATCTGGCAGGC
CCGCCGCTCCGAGAGGCCCATGACGGTCTTCAGATGGGCGACGGCTTCACGCCTGGCGGCAGGCCGTAACATTGAAGAAGCTCGCGGAGTGCGGCGGCAC
CCAGCATCTGCCCGGACAGCATCTTCTTCAGCTTGGCGTTCTCCTCTTCGAGCGCCTTCAGGCGCTTCGCCTCGGAAACCTCCATGCCGCCGTGTTTGGC
TTTCCAGTTGTAAAAGGTCGCTTCCGAAATCCCGTGCTTGCGGCAGAGCTCAGCCACCTTCGCACGGCCCCCTGCACCTTCAGCATGCAATAATCTGCTC
TTCCGTAGATCT
Protein section
ORF number : 0
Comments
ISRm7 is located between the syrM (regulatory gene of nodD3 and syrA) and nodD3 (regulatory gene of syrM and nod regulon genes such as nodABC) genes (Barnett et al., 1996). ISRm7 is a 912-bp relic element 88 % identical to ISRm6 (from position 75 to 989).
References
1] Barnett, M.J., Rushing, B.G., Fisher, R.F., and Long, S.R. (1996) J. Bacteriol. 178, 1782-1787.