ISPa5

  • Family ISNCY
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s) IS-PA-5
Accession numberTranspositionOriginHost
U16785 ND Pseudomonas aeruginosa
Pseudomonas aeruginosa PAO-muc
DNA section
IS Length : 965 bp

Ends


IR Length : 0

IRL : CTCTCCGACTGCCCCCAACTCCTCGACAGCCCACGCCCGCTGATCCGGGC
IRR : CCGGTGGTGGGTGAACGACTAGGGTGGAGGTGCGGTGAGAACGTTGGAGA

Insertion site


Left flankDirect repeatRight flankDR Length

DNA sequence

CTCTCCGACTGCCCCCAACTCCTCGACAGCCCACGCCCGCTGATCCGGGCCTGACCCCCGTCATACGCCCTGAAAGGAGTCAGGGCTTGTAACAACAGCA
CGACCTTTGGCAACCTTTCCCCAATGCCCCGGCACGCTCGTCTGTACAGATCCTAGGACTGGATTTCCAAGCCCTGTTGCTACCCAGGGCCCCGCAGAAA
TACCAAAGCCAAGGTCCTTCCAAAGCCCCTCGTTCGAATCGTCTGGTAACCAGACAAACGGCCCGGAGCACTTACTGAAACTTATGCCACCACCAATAGA
GATCTAGATCACATTTTATTGTAAGCAGTGATGGCAAAGTTCCCGCAGAGCGACACAAAGACCACTGGAAGTCCACTTGAATGGCTCACCAGAAACGCTA
TTCGACTAATGAGAGGAACATGGTGAGCGACAAGAAGTGGTGCGTTATCGCTGTAGCAGCGCTTTATCTGCTCAGTGGAATACTCTTGATAAGGTCTCCG
ATCAGCCTGCCCCCCTTCGTCGAAAGCGTATGGAGGTTCTACAGCAGCATTGGTTTCGATATGAGTCGAGACATTGCGCGAGCTGTCATACTCTCTCTGA
GTCTTTCATGCTTGGCCCACGCATTAATAATACTCACGACTTATATCACCAATGGAGGGCTACCAAAGGTTCTCAGGGGGCATGAGCAGTATCTCTTCCT
CAGAGCGCTGTTTTACCTTGGCCTTTGCATTCTGGGTATTGGGGCGATGGGAGACAATATATCCGCAAGGAGAACCTCTTCATTCAGCAAGGAACTATCG
ATTCTGCTGGGAGCTTCTATCTGGGAGGAGTGGTTTGGACAGTGAGTGATTTGCTTGCGTCAATCATCCTGAAGTTTAAGAGGTGAGTACGACAGCCAAC
TCGCCTGGGGGCAATTCTCCAACGTTCTCACCGCACCTCCACCCTAGTCGTTCACCCACCACCGG
Protein section
ORF number : 0

 

Comments
ISPa5 is associated with the exotoxin A (toxA) gene. Note that ISPa5 DNA sequence displays some similarity with the RSF1010 plasmid and other segments of various virulence plasmids (Sokol et al., 1994).
References
1] Sokol, P.A., Luan, M.-Z., Storey, D.G., and Thirukkumaran, P. (1994) J. Bacteriol. 176, 553-562.