ISPa5
- Family ISNCY
- Group
Isoform Synonym(s) IS-PA-5
Accession number | Transposition | Origin | Host |
---|---|---|---|
U16785 | ND | Pseudomonas aeruginosa | Pseudomonas aeruginosa PAO-muc |
DNA section
IS Length : 965 bp
Ends
IR Length : 0
IRL : CTCTCCGACTGCCCCCAACTCCTCGACAGCCCACGCCCGCTGATCCGGGC
IRR : CCGGTGGTGGGTGAACGACTAGGGTGGAGGTGCGGTGAGAACGTTGGAGA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|
DNA sequence
CTCTCCGACTGCCCCCAACTCCTCGACAGCCCACGCCCGCTGATCCGGGCCTGACCCCCGTCATACGCCCTGAAAGGAGTCAGGGCTTGTAACAACAGCA
CGACCTTTGGCAACCTTTCCCCAATGCCCCGGCACGCTCGTCTGTACAGATCCTAGGACTGGATTTCCAAGCCCTGTTGCTACCCAGGGCCCCGCAGAAA
TACCAAAGCCAAGGTCCTTCCAAAGCCCCTCGTTCGAATCGTCTGGTAACCAGACAAACGGCCCGGAGCACTTACTGAAACTTATGCCACCACCAATAGA
GATCTAGATCACATTTTATTGTAAGCAGTGATGGCAAAGTTCCCGCAGAGCGACACAAAGACCACTGGAAGTCCACTTGAATGGCTCACCAGAAACGCTA
TTCGACTAATGAGAGGAACATGGTGAGCGACAAGAAGTGGTGCGTTATCGCTGTAGCAGCGCTTTATCTGCTCAGTGGAATACTCTTGATAAGGTCTCCG
ATCAGCCTGCCCCCCTTCGTCGAAAGCGTATGGAGGTTCTACAGCAGCATTGGTTTCGATATGAGTCGAGACATTGCGCGAGCTGTCATACTCTCTCTGA
GTCTTTCATGCTTGGCCCACGCATTAATAATACTCACGACTTATATCACCAATGGAGGGCTACCAAAGGTTCTCAGGGGGCATGAGCAGTATCTCTTCCT
CAGAGCGCTGTTTTACCTTGGCCTTTGCATTCTGGGTATTGGGGCGATGGGAGACAATATATCCGCAAGGAGAACCTCTTCATTCAGCAAGGAACTATCG
ATTCTGCTGGGAGCTTCTATCTGGGAGGAGTGGTTTGGACAGTGAGTGATTTGCTTGCGTCAATCATCCTGAAGTTTAAGAGGTGAGTACGACAGCCAAC
TCGCCTGGGGGCAATTCTCCAACGTTCTCACCGCACCTCCACCCTAGTCGTTCACCCACCACCGG
CGACCTTTGGCAACCTTTCCCCAATGCCCCGGCACGCTCGTCTGTACAGATCCTAGGACTGGATTTCCAAGCCCTGTTGCTACCCAGGGCCCCGCAGAAA
TACCAAAGCCAAGGTCCTTCCAAAGCCCCTCGTTCGAATCGTCTGGTAACCAGACAAACGGCCCGGAGCACTTACTGAAACTTATGCCACCACCAATAGA
GATCTAGATCACATTTTATTGTAAGCAGTGATGGCAAAGTTCCCGCAGAGCGACACAAAGACCACTGGAAGTCCACTTGAATGGCTCACCAGAAACGCTA
TTCGACTAATGAGAGGAACATGGTGAGCGACAAGAAGTGGTGCGTTATCGCTGTAGCAGCGCTTTATCTGCTCAGTGGAATACTCTTGATAAGGTCTCCG
ATCAGCCTGCCCCCCTTCGTCGAAAGCGTATGGAGGTTCTACAGCAGCATTGGTTTCGATATGAGTCGAGACATTGCGCGAGCTGTCATACTCTCTCTGA
GTCTTTCATGCTTGGCCCACGCATTAATAATACTCACGACTTATATCACCAATGGAGGGCTACCAAAGGTTCTCAGGGGGCATGAGCAGTATCTCTTCCT
CAGAGCGCTGTTTTACCTTGGCCTTTGCATTCTGGGTATTGGGGCGATGGGAGACAATATATCCGCAAGGAGAACCTCTTCATTCAGCAAGGAACTATCG
ATTCTGCTGGGAGCTTCTATCTGGGAGGAGTGGTTTGGACAGTGAGTGATTTGCTTGCGTCAATCATCCTGAAGTTTAAGAGGTGAGTACGACAGCCAAC
TCGCCTGGGGGCAATTCTCCAACGTTCTCACCGCACCTCCACCCTAGTCGTTCACCCACCACCGG
Protein section
ORF number : 0
Comments
ISPa5 is associated with the exotoxin A (toxA) gene. Note that ISPa5 DNA sequence displays some similarity with the RSF1010 plasmid and other segments of various virulence plasmids (Sokol et al., 1994).
References
1] Sokol, P.A., Luan, M.-Z., Storey, D.G., and Thirukkumaran, P. (1994) J. Bacteriol. 176, 553-562.