ISVlu1

  • Family ISL3
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
CP081833 Y Vagococcus lutrae
Vagococcus lutrae
Vagococcus lutrae BN31
Enterococcus faecalis EFs17-1 plasmid pEFs17-1
DNA section
IS Length : 1526 bp

Ends


IR Length : 21/29

IRL : GGCTCTATAATTTAAAGGACTGATGAATCAAATTTTGATTCATCAGTCCT
IRR : GGCTCTTTGTCAAATCGGACTGATGAGTCGGATATATAAGATGATAAACT

Insertion site


Left flankDirect repeatRight flankDR Length
TCGCAGGGTGTAAAAAAAAGCCAACTACCGTC8
AGCTTAGGACTATTTTTTTGAAACTCAAAAGGTCTTCAC0
AGAGTAGAGGAGCAAAATTGTTTTTTTGTGCAACAAAAAA0

DNA sequence

GGCTCTATAATTTAAAGGACTGATGAATCAAATTTTGATTCATCAGTCCTTTTTTAGTTTATTTAAATATAAAACATGTCGTCTATCTAGTAAAATTTAA
GTACGACCAAAAATCTAAGATAGAAAGGACGACATGTCTTGAATAATCATATCAAAAAAATGCTACGAATTACAGATGAACATTTAGATTTAACAAATAC
GGAGGAATATAAAATTAAAGGGAAGAACACTTTAGTTATCTTTGGAGTCTATTCTCCCATGCCTTCGGCTTGTAGGAACTGTGGTTCAACTATTGTTGAT
AATGAAGGGAAAAGTGTAGTTGTTAGAAATGGAAAAAAGGAAGTAACTATTCAGTTAGATTCTTATCAAAATATGCCCACTATTTTAAAACTGAAGAAAC
AACGATTCCATTGTAAAAGCTGTTCGCACAATTGGACGGCACAGTGTTCTATTGTTGAAAAAAACTGTCATATCAGTAAATTTATTACTTTGAAAATTTT
AGAATTATTAACTGAGAAAATCTCTATGACATTTATAGCTAAACAATGCCACGTTTCATTAACTACAGTTTTAAGAGTTCTTAAGTCAGTTGAATCACAA
CTCCCGCAACAACTTAAACCACGGAGTTTTCCAGAAGTTTTAATGGTAGATGAGTTTAGATCTCACGCTAGTTATGAAGATAAAATGAGCTTCATATGTG
CTGATGGAGAAACAGGTGAATTAGTAGATATTTTACCTAGTAGGAAATTAGATAAAATAACCCCTTACTTCAATCGCTCTCCGTTGGAGGAAAGGGAAAA
AGTTAAATTTTTAGTAACAGATATGAATGCTGCTTACTTTCAATTAACTAAAAATGTCTTTCCTACTGCTAAATTAATCATTGATAGGTTCCATATTGTG
AAGCATTTGAACACCGCTTTTAATGATTTTAGAGTCCGAGAAATGAAGAGATTAATTACCAATAAGAAAAAGTCAAAAGCAAATAAATTAAAATCAAACT
GGAAATTACTTCTAAAAAATCAAACAAATATTTCCATTTCAGAGTTCAAAACTTGGAGAAGTTTTCCTTCTCCAAAGTACCATCTTTTAACGGAATCTAT
GGTGATTGATCGACTACTCTCATTTTCTTCTGAACTAAAAGAAGCTTATGACATTTTCCATTTATTAATGTATCACTTTAGAAACAAAGATGACCGTTCC
TTTTTCGAACTATTGAAAAATCTACCTGATAGCTTGGATACACAATTTAGAGATAAAATAGAAAATCTGATTTCCTATGAAGAAGGTATTAGAAACGCTC
TTAAATATAATTTTTCCAATGGAAAAATTGAAGCTAAGAACACTCATATAAAAACACTTAAAAGAGTTTCCTACGGATTCAACTCATTTACAAATATGCG
TATAAGAATTTTCTTGATAAACGGCCTTATTAAAATTAAATAACTAAAAAAGATGATAAATCTGAGAGTAATCTCAAGTTTATCATCTTATATATCCGAC
TCATCAGTCCGATTTGACAAAGAGCC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1305 bp434 aa1391443+No
ORF function : Transposase
Chemistry : Unknow

ORF sequence :

MNNHIKKMLRITDEHLDLTNTEEYKIKGKNTLVIFGVYSPMPSACRNCGSTIVDNEGKSVVVRNGKKEVTIQLDSYQNMPTILKLKKQRFHCKSCSHNWT
AQCSIVEKNCHISKFITLKILELLTEKISMTFIAKQCHVSLTTVLRVLKSVESQLPQQLKPRSFPEVLMVDEFRSHASYEDKMSFICADGETGELVDILP
SRKLDKITPYFNRSPLEEREKVKFLVTDMNAAYFQLTKNVFPTAKLIIDRFHIVKHLNTAFNDFRVREMKRLITNKKKSKANKLKSNWKLLLKNQTNISI
SEFKTWRSFPSPKYHLLTESMVIDRLLSFSSELKEAYDIFHLLMYHFRNKDDRSFFELLKNLPDSLDTQFRDKIENLISYEEGIRNALKYNFSNGKIEAK
NTHIKTLKRVSYGFNSFTNMRIRIFLINGLIKIK

 

Blast result :
Comments
ISVlu1 is 76% aa similar to ISEfa5.
References
1] Zhu,Y., Zhang, W., Liu, S. (2021) Direct submission.
2] Zhu,Y. (2021) Direct GenBank submission.