ISSen15
- Family IS6
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
CP030205 | ND | Salmonella enterica | Salmonella enterica |
DNA section
IS Length : 818 bp
Ends
IR Length : 14
IRL : GGCACTGTTGCAAAAATCTGGCAGTGATAAACTTATTGCCCCTTTGCTGA
IRR : GGCACTGTTGCAAAGTTCGCGACGAGGTAGCCTTTTATCTTATTGAAAGG
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
TATCGATGGGGCCTGTATATAGCAGGGTC | CAACTGGTGCGCCTCAATGGGAGTCGT | 0 |
DNA sequence
GGCACTGTTGCAAAAATCTGGCAGTGATAAACTTATTGCCCCTTTGCTGACGGAGCTGCACATGAACCCATTCAAAGGACGGCATTTTCAGCGTGACATC
ATCCTGTGGGCGGTACGCTGGGACTGCAAATACGGCATCAGCTACCGTGAACTGCAGGAGATGCTGGCCGAGCGTGGTGTGAATGTCGCTCACTCCACTA
TTTACCGCTGGGTTCAGCGTTATGCACCTGAAATAGAAAAGCGACTGCGCTGGTACTGGCGTAACCCTTCCGATCTTTGCCCGTGGCACATTGATGAAAC
GTACGTGAAGGTCAATGGTCGCCGGGCTTATCTTTATCGGGCCGTTGACAACAGGGGCCGCACTGTCGATTTTTACCTCTCCCCACGTCGTAACAGCAAG
GCGGCATACCGGTTTCTCGGTAAAATATTCAACAACGTGAAGAAGTGGCAGATCCCTCGATCCATCAACACGGATAAAGCGCCCACCTATGGCCGTGCGC
TCGCTCTGCTCAAACGCGAAGGTCGATGTCCGCCTGATGTTGAACACCGACAGATTAAGTATCGGAATAACGTCATTGAATGCGATCATGGCAAGCTGAA
AAGGATAATCGGCGCCACGCTGGGATTTAAATCCATGAAGACGGCTTACACCACAATTAAAGGTATTGAGGTGATGCGTGCACTACACAAAGGCCAGGCC
TCAGCGTTTTATTATGGTGATCCCCTGGGCGAGATGCGCCTGGTAAGAAAAGTCTTTGAAATATAATGCCTTTCAATAAGATAAAAGGCTACCTCGTCGC
GAACTTTGCAACAGTGCC
ATCCTGTGGGCGGTACGCTGGGACTGCAAATACGGCATCAGCTACCGTGAACTGCAGGAGATGCTGGCCGAGCGTGGTGTGAATGTCGCTCACTCCACTA
TTTACCGCTGGGTTCAGCGTTATGCACCTGAAATAGAAAAGCGACTGCGCTGGTACTGGCGTAACCCTTCCGATCTTTGCCCGTGGCACATTGATGAAAC
GTACGTGAAGGTCAATGGTCGCCGGGCTTATCTTTATCGGGCCGTTGACAACAGGGGCCGCACTGTCGATTTTTACCTCTCCCCACGTCGTAACAGCAAG
GCGGCATACCGGTTTCTCGGTAAAATATTCAACAACGTGAAGAAGTGGCAGATCCCTCGATCCATCAACACGGATAAAGCGCCCACCTATGGCCGTGCGC
TCGCTCTGCTCAAACGCGAAGGTCGATGTCCGCCTGATGTTGAACACCGACAGATTAAGTATCGGAATAACGTCATTGAATGCGATCATGGCAAGCTGAA
AAGGATAATCGGCGCCACGCTGGGATTTAAATCCATGAAGACGGCTTACACCACAATTAAAGGTATTGAGGTGATGCGTGCACTACACAAAGGCCAGGCC
TCAGCGTTTTATTATGGTGATCCCCTGGGCGAGATGCGCCTGGTAAGAAAAGTCTTTGAAATATAATGCCTTTCAATAAGATAAAAGGCTACCTCGTCGC
GAACTTTGCAACAGTGCC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
705 bp | 234 aa | 63 | 767 | + | No |
Chemistry : DDE
ORF sequence :
MNPFKGRHFQRDIILWAVRWDCKYGISYRELQEMLAERGVNVAHSTIYRWVQRYAPEIEKRLRWYWRNPSDLCPWHIDETYVKVNGRRAYLYRAVDNRGR
TVDFYLSPRRNSKAAYRFLGKIFNNVKKWQIPRSINTDKAPTYGRALALLKREGRCPPDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYTTIK
GIEVMRALHKGQASAFYYGDPLGEMRLVRKVFEI
TVDFYLSPRRNSKAAYRFLGKIFNNVKKWQIPRSINTDKAPTYGRALALLKREGRCPPDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYTTIK
GIEVMRALHKGQASAFYYGDPLGEMRLVRKVFEI
Blast result :
Comments
ISSen15 is 91% similar to IS15DIV
References
1] Dongsheng Zhou (2021) Direct submission.
2] Nash,J.H.E., Robertson,J. and Bessonov,K. (2018) Direct GenBank submission.
2] Nash,J.H.E., Robertson,J. and Bessonov,K. (2018) Direct GenBank submission.