ISSen15

  • Family IS6
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
CP030205 ND Salmonella enterica
Salmonella enterica
DNA section
IS Length : 818 bp

Ends


IR Length : 14

IRL : GGCACTGTTGCAAAAATCTGGCAGTGATAAACTTATTGCCCCTTTGCTGA
IRR : GGCACTGTTGCAAAGTTCGCGACGAGGTAGCCTTTTATCTTATTGAAAGG

Insertion site


Left flankDirect repeatRight flankDR Length
TATCGATGGGGCCTGTATATAGCAGGGTCCAACTGGTGCGCCTCAATGGGAGTCGT0

DNA sequence

GGCACTGTTGCAAAAATCTGGCAGTGATAAACTTATTGCCCCTTTGCTGACGGAGCTGCACATGAACCCATTCAAAGGACGGCATTTTCAGCGTGACATC
ATCCTGTGGGCGGTACGCTGGGACTGCAAATACGGCATCAGCTACCGTGAACTGCAGGAGATGCTGGCCGAGCGTGGTGTGAATGTCGCTCACTCCACTA
TTTACCGCTGGGTTCAGCGTTATGCACCTGAAATAGAAAAGCGACTGCGCTGGTACTGGCGTAACCCTTCCGATCTTTGCCCGTGGCACATTGATGAAAC
GTACGTGAAGGTCAATGGTCGCCGGGCTTATCTTTATCGGGCCGTTGACAACAGGGGCCGCACTGTCGATTTTTACCTCTCCCCACGTCGTAACAGCAAG
GCGGCATACCGGTTTCTCGGTAAAATATTCAACAACGTGAAGAAGTGGCAGATCCCTCGATCCATCAACACGGATAAAGCGCCCACCTATGGCCGTGCGC
TCGCTCTGCTCAAACGCGAAGGTCGATGTCCGCCTGATGTTGAACACCGACAGATTAAGTATCGGAATAACGTCATTGAATGCGATCATGGCAAGCTGAA
AAGGATAATCGGCGCCACGCTGGGATTTAAATCCATGAAGACGGCTTACACCACAATTAAAGGTATTGAGGTGATGCGTGCACTACACAAAGGCCAGGCC
TCAGCGTTTTATTATGGTGATCCCCTGGGCGAGATGCGCCTGGTAAGAAAAGTCTTTGAAATATAATGCCTTTCAATAAGATAAAAGGCTACCTCGTCGC
GAACTTTGCAACAGTGCC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
705 bp234 aa63767+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MNPFKGRHFQRDIILWAVRWDCKYGISYRELQEMLAERGVNVAHSTIYRWVQRYAPEIEKRLRWYWRNPSDLCPWHIDETYVKVNGRRAYLYRAVDNRGR
TVDFYLSPRRNSKAAYRFLGKIFNNVKKWQIPRSINTDKAPTYGRALALLKREGRCPPDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYTTIK
GIEVMRALHKGQASAFYYGDPLGEMRLVRKVFEI

 

Blast result :
Comments
ISSen15 is 91% similar to IS15DIV
References
1] Dongsheng Zhou (2021) Direct submission.
2] Nash,J.H.E., Robertson,J. and Bessonov,K. (2018) Direct GenBank submission.