ISPa141
- Family IS30
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
CP045554 | ND | Pseudomonas aeruginosa | Pseudomonas aeruginosa Pseudomonas sp. 14181154 |
DNA section
IS Length : 1113 bp
Ends
IR Length : 20/27
IRL : GGCGGCGGCGAAAACTGAGTGCAACACCTGACCTTTCCGGTACGGTGCTG
IRR : GGCGGTTACAGGAGCTGAGTGCAACACGGTTATTGAATTGAAGCTGGAGC
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
CCTCGCAGTGATAATAAGGG | CTGTGTAATTTCTTACATTG | 0 |
DNA sequence
GGCGGCGGCGAAAACTGAGTGCAACACCTGACCTTTCCGGTACGGTGCTGTCCCTATGTCTTATTCCGAACTCAGCGTTGAAGAGCGCGCCACCATTCAA
ATCGGTCATGCCCAAGGTTTCAGCCTGCGCGGGATTGCCTGCTTGATCAACCGATCCCCTTCGACCATCAGCCGGGAGCTGCGCCGCAATCGAGATGCCT
GTGGCGGCTACTCGGCCCGCGTGGCCCAGCAGCAGATGCAGGCCCGCCGTCAGGTGTGTCGACCGAAGCAAAAGCTGTTGCCGGGTAGCGAGCGCTTCGA
ATTGGTGGCGCATATGCTGCGTGAGCGTTTGTCTCCCGAGCAGATTGCCGGCAAGCTGCGCAGCATGAATATTCCCAGCCTCAGAGATGCCTACGTCTGT
CGCGAGACGATCTATAACGCGATCTATGCCTTGCCAGTCGGCGAGCTGCGTAAAGAGCTGATCATCTGCCTGCGCCAAAGCAAGACGATGCGCAGGCCGC
GCTCTGGCGGCGTGGATCGGCGCGGTCAGATCCCTGAGAGGGTCAGTATTCATGTACGTCCGCCGGAGATCGAAGACCGACTGATGCCAGGGCATTGGGA
AGGCGACCTGATCAAGGGCAAGGCCAACGCCTCGTCTGTAGGTACGCTGGTGGAGCGCACCAGTGGCTACCTGATGCTGGTGAAGATGAACGACGCGACG
GCGACCTCGGCGATGGAAGGCTTCAGTGCAGCGCTCAATGGCATGCCGCTGGCGATGCGCAAGAGCATGACCTACGACCAGGGCCGAGAAATGGCGCGGC
ATGCTGAAATCACCCAGCAGACCGGGGTGGCGATTTACTTCTGCGACCCGCACAGCCCTTGGCAGCGCGGCAGTAACGAAAACATCAATGGCCTGATCCG
CCAGTACCTGCCCAAGGGCACGGACTTGTCGGTGCATAGCCAGGAGGAACTGGATGCCATCGCACTGCAACTGAACATGCGCCCCCGTAAGCGCTTCGAC
TTCAAGTGTCCGATCGAGGTTATGGACGAGGTGATGCAGGAAGCTATGGCTATGCGGCATGATGCTCCAGCTTCAATTCAATAACCGTGTTGCACTCAGC
TCCTGTAACCGCC
ATCGGTCATGCCCAAGGTTTCAGCCTGCGCGGGATTGCCTGCTTGATCAACCGATCCCCTTCGACCATCAGCCGGGAGCTGCGCCGCAATCGAGATGCCT
GTGGCGGCTACTCGGCCCGCGTGGCCCAGCAGCAGATGCAGGCCCGCCGTCAGGTGTGTCGACCGAAGCAAAAGCTGTTGCCGGGTAGCGAGCGCTTCGA
ATTGGTGGCGCATATGCTGCGTGAGCGTTTGTCTCCCGAGCAGATTGCCGGCAAGCTGCGCAGCATGAATATTCCCAGCCTCAGAGATGCCTACGTCTGT
CGCGAGACGATCTATAACGCGATCTATGCCTTGCCAGTCGGCGAGCTGCGTAAAGAGCTGATCATCTGCCTGCGCCAAAGCAAGACGATGCGCAGGCCGC
GCTCTGGCGGCGTGGATCGGCGCGGTCAGATCCCTGAGAGGGTCAGTATTCATGTACGTCCGCCGGAGATCGAAGACCGACTGATGCCAGGGCATTGGGA
AGGCGACCTGATCAAGGGCAAGGCCAACGCCTCGTCTGTAGGTACGCTGGTGGAGCGCACCAGTGGCTACCTGATGCTGGTGAAGATGAACGACGCGACG
GCGACCTCGGCGATGGAAGGCTTCAGTGCAGCGCTCAATGGCATGCCGCTGGCGATGCGCAAGAGCATGACCTACGACCAGGGCCGAGAAATGGCGCGGC
ATGCTGAAATCACCCAGCAGACCGGGGTGGCGATTTACTTCTGCGACCCGCACAGCCCTTGGCAGCGCGGCAGTAACGAAAACATCAATGGCCTGATCCG
CCAGTACCTGCCCAAGGGCACGGACTTGTCGGTGCATAGCCAGGAGGAACTGGATGCCATCGCACTGCAACTGAACATGCGCCCCCGTAAGCGCTTCGAC
TTCAAGTGTCCGATCGAGGTTATGGACGAGGTGATGCAGGAAGCTATGGCTATGCGGCATGATGCTCCAGCTTCAATTCAATAACCGTGTTGCACTCAGC
TCCTGTAACCGCC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1029 bp | 342 aa | 56 | 1084 | + | No |
ORF sequence :
MSYSELSVEERATIQIGHAQGFSLRGIACLINRSPSTISRELRRNRDACGGYSARVAQQQMQARRQVCRPKQKLLPGSERFELVAHMLRERLSPEQIAGK
LRSMNIPSLRDAYVCRETIYNAIYALPVGELRKELIICLRQSKTMRRPRSGGVDRRGQIPERVSIHVRPPEIEDRLMPGHWEGDLIKGKANASSVGTLVE
RTSGYLMLVKMNDATATSAMEGFSAALNGMPLAMRKSMTYDQGREMARHAEITQQTGVAIYFCDPHSPWQRGSNENINGLIRQYLPKGTDLSVHSQEELD
AIALQLNMRPRKRFDFKCPIEVMDEVMQEAMAMRHDAPASIQ
LRSMNIPSLRDAYVCRETIYNAIYALPVGELRKELIICLRQSKTMRRPRSGGVDRRGQIPERVSIHVRPPEIEDRLMPGHWEGDLIKGKANASSVGTLVE
RTSGYLMLVKMNDATATSAMEGFSAALNGMPLAMRKSMTYDQGREMARHAEITQQTGVAIYFCDPHSPWQRGSNENINGLIRQYLPKGTDLSVHSQEELD
AIALQLNMRPRKRFDFKCPIEVMDEVMQEAMAMRHDAPASIQ
Blast result :
Comments
ISPa141 is 96% aa similar to ISPsp7.
References
1] Hong Du (2021) Direct submission.