ISBce22
- Family IS200/IS605
- Group IS1341
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
NZ_CP009589.1 | ND | Bacillus cereus | Bacillus cereus Bacillus cereus G9241 |
DNA section
IS Length : 1523 bp
Ends
Left end : AAGGGTGGTAGTTATGAAGAATACTAATTTAATAACAAAAATTGAGATAAAAGGGTTAGAAAGACTCAAAGAATTAGTAGAGGAGTTGAATAATCTTGAA II struct. : Yes
Right end : ACGGGGCTAGCCTACTAAGATAACCGAAGGATACTTTGGTGTTCGTAGGAATCCCTCACTTCAAGCAACCTGTAAGGATGTTAAGTGACGGGTAGTTCAA II struct. : Yes
Insertion site
Left flank | LE cleavage site | Right flank | RE cleavage site |
---|---|---|---|
CATTATACCAAATTAAAAA | TTGA | CACTCTAGCTAAAT | TCAA |
DNA sequence
AAGGGTGGTAGTTATGAAGAATACTAATTTAATAACAAAAATTGAGATAAAAGGGTTAGAAAGACTCAAAGAATTAGTAGAGGAGTTGAATAATCTTGAA
TTAGAAGTTGTTGTACATGAAGTAAAACAAGAAGAGGATTGAAGCCAATGGATAAACAGCAGCGGGACAAAGAAGAGAAAGTAAACATCATCAAAATGAT
ACGTGATTTAAGAGCTAGAGGGATACATAACAGCGCAGATAAGGTTGAGGAAATGCATAAGGAGTTTATTACTCTAGATAAGGAGGTGTATCATGCATAA
ATCATTTAAATTTCGTATATATCCAACTCAAGAACAAGAAATACTGATTGCTAAAACAATAGGTTGTTCACGCTTCGTATTCAATCATTTCCTTTCAAAA
TGGAACGATGTGTACAAAGAAACCGGAAAAGGATTAACATACAATACTTGCTCTTCTCAATTAACGCAACTCAAGAAAGAATTGGTTTGGTTAAAGGAAG
TAGATAGTATTGCTGTTCAATCATCACTTAAAAATCTCGCTGATTCGTACGCTAGATTCTTCAAGAAGCAAAATAAAGCACCACGATTCAAATCTAAAAA
GAACAGCGGGCAATCATATACAACGAAATACACGAAGGGAAATATTGCTATCGTCGGAAACAAAATTAAACTACCGAAACTTAGATTTGTTCGTTTTGCG
AAAAGTCGAGAAGTAGATGGTCGTATATTGAGAGCTACTGTTAAACGTAATCCCAGCGGAAAATACTTTGTATCTATCCTTGTAGAAACAGAAATAGAAG
AATTACCTAAAACGAACTCATCTGTTGGCATTGATGTAGGTCTGAAAGATTTTGCTATTTTGTCAACTGGTGAAGTTTTTTCTAATCCGAAATGGTTCCG
TAAAATCGAAAATAAGTTGATTGATGCACAACGCATTCTTTCTAGACGTCAGGAATTGGCTTTGAAACGAAAATGCAAGCTAGATGAAGCAAAAAACTAT
CAAAAACAAAAACGTAAAGTGGCACGAATTCACGAGCGAATTGCGAATGCAAGAACGGATTACTTGCAAAAAATCTCTACTCATATCATCAAAAATCACG
ATGTTATAGGTATTGAAGATTTACAAGTAACCAATATGTTAAAGAACCACAAGTTAGCGAAAGCAATTAGTGAAGTATCATGGTCACAATTTAGAACGAT
GCTTGAATATAAAGCAAAATGGTACAGAAAACAAGTTGTTGCTGTTTCTAAAACATTTGCTAGTTCTCAACTGTGTTCATGTTGCGGATATAAAAACAAA
GACGTTAAGAATCTAAATCTCCGTAAATGGGATTGTCCAGAGTGTAGCGCACATCATGACAGAGACATTAACGCAAGTATCAATCTAAAAAATGAAGCGA
TAAGACTTCTAACCGTAGGGACTACGGGGCTAGCCTACTAAGATAACCGAAGGATACTTTGGTGTTCGTAGGAATCCCTCACTTCAAGCAACCTGTAAGG
ATGTTAAGTGACGGGTAGTTCAA
TTAGAAGTTGTTGTACATGAAGTAAAACAAGAAGAGGATTGAAGCCAATGGATAAACAGCAGCGGGACAAAGAAGAGAAAGTAAACATCATCAAAATGAT
ACGTGATTTAAGAGCTAGAGGGATACATAACAGCGCAGATAAGGTTGAGGAAATGCATAAGGAGTTTATTACTCTAGATAAGGAGGTGTATCATGCATAA
ATCATTTAAATTTCGTATATATCCAACTCAAGAACAAGAAATACTGATTGCTAAAACAATAGGTTGTTCACGCTTCGTATTCAATCATTTCCTTTCAAAA
TGGAACGATGTGTACAAAGAAACCGGAAAAGGATTAACATACAATACTTGCTCTTCTCAATTAACGCAACTCAAGAAAGAATTGGTTTGGTTAAAGGAAG
TAGATAGTATTGCTGTTCAATCATCACTTAAAAATCTCGCTGATTCGTACGCTAGATTCTTCAAGAAGCAAAATAAAGCACCACGATTCAAATCTAAAAA
GAACAGCGGGCAATCATATACAACGAAATACACGAAGGGAAATATTGCTATCGTCGGAAACAAAATTAAACTACCGAAACTTAGATTTGTTCGTTTTGCG
AAAAGTCGAGAAGTAGATGGTCGTATATTGAGAGCTACTGTTAAACGTAATCCCAGCGGAAAATACTTTGTATCTATCCTTGTAGAAACAGAAATAGAAG
AATTACCTAAAACGAACTCATCTGTTGGCATTGATGTAGGTCTGAAAGATTTTGCTATTTTGTCAACTGGTGAAGTTTTTTCTAATCCGAAATGGTTCCG
TAAAATCGAAAATAAGTTGATTGATGCACAACGCATTCTTTCTAGACGTCAGGAATTGGCTTTGAAACGAAAATGCAAGCTAGATGAAGCAAAAAACTAT
CAAAAACAAAAACGTAAAGTGGCACGAATTCACGAGCGAATTGCGAATGCAAGAACGGATTACTTGCAAAAAATCTCTACTCATATCATCAAAAATCACG
ATGTTATAGGTATTGAAGATTTACAAGTAACCAATATGTTAAAGAACCACAAGTTAGCGAAAGCAATTAGTGAAGTATCATGGTCACAATTTAGAACGAT
GCTTGAATATAAAGCAAAATGGTACAGAAAACAAGTTGTTGCTGTTTCTAAAACATTTGCTAGTTCTCAACTGTGTTCATGTTGCGGATATAAAAACAAA
GACGTTAAGAATCTAAATCTCCGTAAATGGGATTGTCCAGAGTGTAGCGCACATCATGACAGAGACATTAACGCAAGTATCAATCTAAAAAATGAAGCGA
TAAGACTTCTAACCGTAGGGACTACGGGGCTAGCCTACTAAGATAACCGAAGGATACTTTGGTGTTCGTAGGAATCCCTCACTTCAAGCAACCTGTAAGG
ATGTTAAGTGACGGGTAGTTCAA
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1149 bp | 382 aa | 293 | 1441 | + | No |
AG : TnpB
ORF sequence :
GKGLTYNTCSSQLTQLKKELVWLKEVDSIAVQSSLKNLADSYARFFKKQNKAPRFKSKKNSGQSYTTKYTKGNIAIVGNKIKLPKLRFVRFAKSREVDGR
ILRATVKRNPSGKYFVSILVETEIEELPKTNSSVGIDVGLKDFAILSTGEVFSNPKWFRKIENKLIDAQRILSRRQELALKRKCKLDEAKNYQKQKRKVA
RIHERIANARTDYLQKISTHIIKNHDVIGIEDLQVTNMLKNHKLAKAISEVSWSQFRTMLEYKAKWYRKQVVAVSKTFASSQLCSCCGYKNKDVKNLNLR
KWDCPECSAHHDRDINASINLKNEAIRLLTVGTTGLAY
ILRATVKRNPSGKYFVSILVETEIEELPKTNSSVGIDVGLKDFAILSTGEVFSNPKWFRKIENKLIDAQRILSRRQELALKRKCKLDEAKNYQKQKRKVA
RIHERIANARTDYLQKISTHIIKNHDVIGIEDLQVTNMLKNHKLAKAISEVSWSQFRTMLEYKAKWYRKQVVAVSKTFASSQLCSCCGYKNKDVKNLNLR
KWDCPECSAHHDRDINASINLKNEAIRLLTVGTTGLAY
Blast result :
Comments
ISBce22 is 86% aa similar to ISBth17.
References
1] JiayaoGuan (2020) Direct submission.
2] Johnson,S.L., Daligault,H.E., Davenport,K.W., Jaissle,J., Frey,K.G., Ladner,J.T., Broomall,S.M., Bishop-Lilly,K.A., Bruce,D.C., Gibbons,H.S., Coyne,S.R., Lo,C.C., Meincke,L., Munk,A.C., Koroleva,G.I., Rosenzweig,C.N., Palacios,G.F., Redden,C.L., Minogue,T.D. and Chain,P.S.(2015)Genome Announc 3 (2), e00151-15.
2] Johnson,S.L., Daligault,H.E., Davenport,K.W., Jaissle,J., Frey,K.G., Ladner,J.T., Broomall,S.M., Bishop-Lilly,K.A., Bruce,D.C., Gibbons,H.S., Coyne,S.R., Lo,C.C., Meincke,L., Munk,A.C., Koroleva,G.I., Rosenzweig,C.N., Palacios,G.F., Redden,C.L., Minogue,T.D. and Chain,P.S.(2015)Genome Announc 3 (2), e00151-15.