ISSen11
- Family IS21
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
CP006057 | ND | Salmonella enterica | Salmonella enterica Salmonella enterica subsp. enterica Serovar Cubana CFSAN002050 plasmid |
DNA section
IS Length : 2610 bp
Ends
IR Length : 28/35
IRL : TGCCTATTCCGGCCGATCGTGAACGGTCATTCCGGTTCAACGTGAACACC
IRR : TGCGTATTCCGGCGAAGTTGAACAGTGATTCCGGCCAACGTGAACACCGC
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
TATACCCAATTGGTGGGTGG | GGTGGGCCATAATGAATTCA | 0 |
DNA sequence
TGCCTATTCCGGCCGATCGTGAACGGTCATTCCGGTTCAACGTGAACACCGATTCTGGTTCAACGTGAACGCTCATTCCGGCCCAAGCTGAACACTTTTG
CCCCATTTTCCGGAATGGGTGTTCATGATGCCGGAACAGCTGTTCACGTTGTCCGGAATCTGTCTTAACGCATTGAATTAAAAACCTTTGGTAGTCTCTC
CCCTTTGCCGGGAAGAGACCATGTCCGCCAAGAGGATTGCAATGCGTAAAATTCGTGATGTTCTGCGACTACGGCTACAGGCCGGGCTCTCCTTCCGCCA
GATCAGCCTCAGCACCAAGGTCAGCGTCGGCGCCATCCAGAAGCTGCTCAAAACCGCCGAGCAGTTGCAGCTGGCCTGGCCGCTGCCGGACGGGCTGGAT
GACACCCAACTGGCCCGGCTGTTCTATCCCGCTGCCGACACCCGCGGCAGTTCCCGCTTCCAGCTCCCGGACTGGCCCACGGTGCATCAGGAGCTCAAGC
GCAAGGGCATGTCGATGCAACTGCTGTGGCAGGAATACACCGAGCGTTACCCCAACCGCTGCTACAGCTACTCCCAGTTCTGCGAGCGCTACCGGGGCTG
GTGCCAGCTGCAGAAGCGCTCCATGCGCCAGCAGCACAAGGCCGGCGAGAAGTGCTTTATCGACTACTGTGGCCCCACCGTGCCCATCGTCTCAGGCTCG
ACCGGCGAGATCCGCCAGGCTCAGATCTTTGTCGCGGTGCTTGGCGCCTCCAACTACACCTATGCCGAAGCCACCCTGACCCAATCGCTACCGGATTGGC
TGCACAGCCACGTCCGCGCCTTTGAATTCTTCGGCGGGACGCCGGCCCTGCTGGTGCCAGACAACCTCAAGAGCGGGGTGAACAAGGCCTGCCGTTATGA
GCCGGAGCTCAATCCCAGCTACCAGCAGCTGGCCGCCCATTACCAGCTGGCGGTGATGCCGGCGCGTCCTTACAAACCCAAGGACAAAGCCAAGGCGGAG
GTTGGGGTTCAGGTGGTCGAACGCTGGATCCTGGCGCGGTTACGCCATCACACCTTCTTCTCGCTGGCGGAGCTGAACCAGTGTCTCCGCGCGCTACTCA
CCGAGCTCAATGAGCGCCCGTTCAAGCAGCTACCGGGCAACCGCCGTCAGGCTTTCGAGCAGCTGGACCAGCCCGCGCTCACGCCGCTGCCACAGCAGCC
TTACCGTTACGTGGCGATCAAGTCGGTCAAGGTCAACATCGACTACCACGTACAGTTCGAGCAGCACCACTACTCGGCACCCCATCAGTACGTCGGCGAG
ACGCTGGAACTGCATGCCGGCGACCAGCTGGTGCAGCTCTACTTCCGCCAGCAGCTGGTGGCCAGCCATCCGCGCAAGCACCAGCCCGGCACCACCACCC
TGGCGGCGCACATGCCGGTGCGCCACAGCAAGCAGCAGGCCTGGACCCCGGGCCGACTCAAGCAGTGGGCGCAGGATATCGGCCCCGACACCCTGCGCTG
GGTGAGCGACCGGCTGGCCGAGAAAGCGCATCCGGAACAGGCCTACCGGCTCTGTCTGGGACTGCTCAACCTCACCCGCAGCTACCCGCCAGAGCGGGTG
AACGGCTGCTGCCAACTCGCCAACCGCGAGGGGTTAAGCCGTCTTAAGCAGCTCAAATCGGTACTCGCCAGCAACCGTGACCAACTGCCTGAGCAACCGA
GCTTCACCTTGGAGCTCCCCCAAAGCCACGACAACATCCGTGGCCCCAACCACTTCCACTAAGCGGAGAACAGCATGAGCCAACAGACCCTCAACCGCCT
GCGCGAGCTCAGACTCGGCGGCATGGCCGCTGCCCTGCAGCAGCAACAAGAACAGGTCGCGACCTACGACGGCCTGTCGTTTATCGAACGGCTGGGACTC
TTGGTCGAGCAAGAACATCTGGCGCGCGAGCAACGCAAACAGGCGCGGCTGGTGCGCCACGCTCGCCTCAAGCTGAGCGCCACCACCCAAGAGATCGACT
ACCAGCACCCGCGCAACATCGACCGAGCCCAGATCGCCCGGCTGGCCCAGGGCGACTGGCTGCAACGCGGGCAGAACCTGCTGATCACCGGCCCCTGCGG
CAGCGGCAAGACCTATCTGGCCTGCGCCTTGGGCTATCAGGCCTGTCTGCAGGGCTACGGCACCCACTACCACCGCCTGTCACGGCTGCTGCAGAGCCTG
ACCCAGGCCAAGGCCGACGGTAGCTACGGCCGGCTATTGGCCCAGTTGGCCAAGGTCGAGCTGCTGATCCTCGATGACTGGGGGCTGGAGCCGCTGCTAC
CCGCCCAGCGCCACGATCTGCTGGAGATCATGGACGACCGTCACGGCCGCCATTCGACCGTGGTGATCAGCCAGCTGCCGACCGACCAGTGGTACGCCAG
CATCGGTGACAGCACCCTCGCTGAAGCGATCCTCGATCGGCTCATGCACAACGCCCACCGGCTGCAACTGAAGGGCGAATCGATGCGCAAACAACGATCG
CCATTGACCCAAGATGAACAGCCGCGCTAAAAAGCCGGCAAGGGAAATGCGCTAAGACGAGCGGTGTTCACGTTGGCCGGAATCACTGTTCAACTTCGCC
GGAATACGCA
CCCCATTTTCCGGAATGGGTGTTCATGATGCCGGAACAGCTGTTCACGTTGTCCGGAATCTGTCTTAACGCATTGAATTAAAAACCTTTGGTAGTCTCTC
CCCTTTGCCGGGAAGAGACCATGTCCGCCAAGAGGATTGCAATGCGTAAAATTCGTGATGTTCTGCGACTACGGCTACAGGCCGGGCTCTCCTTCCGCCA
GATCAGCCTCAGCACCAAGGTCAGCGTCGGCGCCATCCAGAAGCTGCTCAAAACCGCCGAGCAGTTGCAGCTGGCCTGGCCGCTGCCGGACGGGCTGGAT
GACACCCAACTGGCCCGGCTGTTCTATCCCGCTGCCGACACCCGCGGCAGTTCCCGCTTCCAGCTCCCGGACTGGCCCACGGTGCATCAGGAGCTCAAGC
GCAAGGGCATGTCGATGCAACTGCTGTGGCAGGAATACACCGAGCGTTACCCCAACCGCTGCTACAGCTACTCCCAGTTCTGCGAGCGCTACCGGGGCTG
GTGCCAGCTGCAGAAGCGCTCCATGCGCCAGCAGCACAAGGCCGGCGAGAAGTGCTTTATCGACTACTGTGGCCCCACCGTGCCCATCGTCTCAGGCTCG
ACCGGCGAGATCCGCCAGGCTCAGATCTTTGTCGCGGTGCTTGGCGCCTCCAACTACACCTATGCCGAAGCCACCCTGACCCAATCGCTACCGGATTGGC
TGCACAGCCACGTCCGCGCCTTTGAATTCTTCGGCGGGACGCCGGCCCTGCTGGTGCCAGACAACCTCAAGAGCGGGGTGAACAAGGCCTGCCGTTATGA
GCCGGAGCTCAATCCCAGCTACCAGCAGCTGGCCGCCCATTACCAGCTGGCGGTGATGCCGGCGCGTCCTTACAAACCCAAGGACAAAGCCAAGGCGGAG
GTTGGGGTTCAGGTGGTCGAACGCTGGATCCTGGCGCGGTTACGCCATCACACCTTCTTCTCGCTGGCGGAGCTGAACCAGTGTCTCCGCGCGCTACTCA
CCGAGCTCAATGAGCGCCCGTTCAAGCAGCTACCGGGCAACCGCCGTCAGGCTTTCGAGCAGCTGGACCAGCCCGCGCTCACGCCGCTGCCACAGCAGCC
TTACCGTTACGTGGCGATCAAGTCGGTCAAGGTCAACATCGACTACCACGTACAGTTCGAGCAGCACCACTACTCGGCACCCCATCAGTACGTCGGCGAG
ACGCTGGAACTGCATGCCGGCGACCAGCTGGTGCAGCTCTACTTCCGCCAGCAGCTGGTGGCCAGCCATCCGCGCAAGCACCAGCCCGGCACCACCACCC
TGGCGGCGCACATGCCGGTGCGCCACAGCAAGCAGCAGGCCTGGACCCCGGGCCGACTCAAGCAGTGGGCGCAGGATATCGGCCCCGACACCCTGCGCTG
GGTGAGCGACCGGCTGGCCGAGAAAGCGCATCCGGAACAGGCCTACCGGCTCTGTCTGGGACTGCTCAACCTCACCCGCAGCTACCCGCCAGAGCGGGTG
AACGGCTGCTGCCAACTCGCCAACCGCGAGGGGTTAAGCCGTCTTAAGCAGCTCAAATCGGTACTCGCCAGCAACCGTGACCAACTGCCTGAGCAACCGA
GCTTCACCTTGGAGCTCCCCCAAAGCCACGACAACATCCGTGGCCCCAACCACTTCCACTAAGCGGAGAACAGCATGAGCCAACAGACCCTCAACCGCCT
GCGCGAGCTCAGACTCGGCGGCATGGCCGCTGCCCTGCAGCAGCAACAAGAACAGGTCGCGACCTACGACGGCCTGTCGTTTATCGAACGGCTGGGACTC
TTGGTCGAGCAAGAACATCTGGCGCGCGAGCAACGCAAACAGGCGCGGCTGGTGCGCCACGCTCGCCTCAAGCTGAGCGCCACCACCCAAGAGATCGACT
ACCAGCACCCGCGCAACATCGACCGAGCCCAGATCGCCCGGCTGGCCCAGGGCGACTGGCTGCAACGCGGGCAGAACCTGCTGATCACCGGCCCCTGCGG
CAGCGGCAAGACCTATCTGGCCTGCGCCTTGGGCTATCAGGCCTGTCTGCAGGGCTACGGCACCCACTACCACCGCCTGTCACGGCTGCTGCAGAGCCTG
ACCCAGGCCAAGGCCGACGGTAGCTACGGCCGGCTATTGGCCCAGTTGGCCAAGGTCGAGCTGCTGATCCTCGATGACTGGGGGCTGGAGCCGCTGCTAC
CCGCCCAGCGCCACGATCTGCTGGAGATCATGGACGACCGTCACGGCCGCCATTCGACCGTGGTGATCAGCCAGCTGCCGACCGACCAGTGGTACGCCAG
CATCGGTGACAGCACCCTCGCTGAAGCGATCCTCGATCGGCTCATGCACAACGCCCACCGGCTGCAACTGAAGGGCGAATCGATGCGCAAACAACGATCG
CCATTGACCCAAGATGAACAGCCGCGCTAAAAAGCCGGCAAGGGAAATGCGCTAAGACGAGCGGTGTTCACGTTGGCCGGAATCACTGTTCAACTTCGCC
GGAATACGCA
Protein section
ORF number : 2
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1521 bp | 506 aa | 242 | 1762 | + | No |
Chemistry : DDE
ORF sequence :
MRKIRDVLRLRLQAGLSFRQISLSTKVSVGAIQKLLKTAEQLQLAWPLPDGLDDTQLARLFYPAADTRGSSRFQLPDWPTVHQELKRKGMSMQLLWQEYT
ERYPNRCYSYSQFCERYRGWCQLQKRSMRQQHKAGEKCFIDYCGPTVPIVSGSTGEIRQAQIFVAVLGASNYTYAEATLTQSLPDWLHSHVRAFEFFGGT
PALLVPDNLKSGVNKACRYEPELNPSYQQLAAHYQLAVMPARPYKPKDKAKAEVGVQVVERWILARLRHHTFFSLAELNQCLRALLTELNERPFKQLPGN
RRQAFEQLDQPALTPLPQQPYRYVAIKSVKVNIDYHVQFEQHHYSAPHQYVGETLELHAGDQLVQLYFRQQLVASHPRKHQPGTTTLAAHMPVRHSKQQA
WTPGRLKQWAQDIGPDTLRWVSDRLAEKAHPEQAYRLCLGLLNLTRSYPPERVNGCCQLANREGLSRLKQLKSVLASNRDQLPEQPSFTLELPQSHDNIR
GPNHFH
ERYPNRCYSYSQFCERYRGWCQLQKRSMRQQHKAGEKCFIDYCGPTVPIVSGSTGEIRQAQIFVAVLGASNYTYAEATLTQSLPDWLHSHVRAFEFFGGT
PALLVPDNLKSGVNKACRYEPELNPSYQQLAAHYQLAVMPARPYKPKDKAKAEVGVQVVERWILARLRHHTFFSLAELNQCLRALLTELNERPFKQLPGN
RRQAFEQLDQPALTPLPQQPYRYVAIKSVKVNIDYHVQFEQHHYSAPHQYVGETLELHAGDQLVQLYFRQQLVASHPRKHQPGTTTLAAHMPVRHSKQQA
WTPGRLKQWAQDIGPDTLRWVSDRLAEKAHPEQAYRLCLGLLNLTRSYPPERVNGCCQLANREGLSRLKQLKSVLASNRDQLPEQPSFTLELPQSHDNIR
GPNHFH
Blast result :ORF 2
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
756 bp | 251 aa | 1775 | 2530 | + | No |
AG : IS21 helper
ORF sequence :
MSQQTLNRLRELRLGGMAAALQQQQEQVATYDGLSFIERLGLLVEQEHLAREQRKQARLVRHARLKLSATTQEIDYQHPRNIDRAQIARLAQGDWLQRGQ
NLLITGPCGSGKTYLACALGYQACLQGYGTHYHRLSRLLQSLTQAKADGSYGRLLAQLAKVELLILDDWGLEPLLPAQRHDLLEIMDDRHGRHSTVVISQ
LPTDQWYASIGDSTLAEAILDRLMHNAHRLQLKGESMRKQRSPLTQDEQPR
NLLITGPCGSGKTYLACALGYQACLQGYGTHYHRLSRLLQSLTQAKADGSYGRLLAQLAKVELLILDDWGLEPLLPAQRHDLLEIMDDRHGRHSTVVISQ
LPTDQWYASIGDSTLAEAILDRLMHNAHRLQLKGESMRKQRSPLTQDEQPR
Blast result :
Comments
ISSen11 is 87% aa (transposase) similar to ISAs29.
References
1] Dongsheng Zhou (2020) Direct submission.
2] Strain,E.A., Allard,M.W., Payne,J. and Timme,R. (2013) Direct GenBank submission.
2] Strain,E.A., Allard,M.W., Payne,J. and Timme,R. (2013) Direct GenBank submission.