ISPmo2

  • Family IS5
  • Group IS5
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
MN310371 ND Pseudomonas monteilii
Pseudomonas monteilii
Pseudomonas monteilii QJ20133 plasmid pJ20133-VIM
DNA section
IS Length : 1188 bp

Ends


IR Length :

IRL : GGAAACTCTGAAGAGGACTTCCAGATTTGGCAGAATGTCTGATCTCAACC
IRR : GGATGGTCTGAAATAGCCGGAAATTTTCCGGCTATCGAGCAGCCAACACA

Insertion site


Left flankDirect repeatRight flankDR Length
CGCAAAACACCTAACAGGTGAGGC4

DNA sequence

GGAAACTCTGAAGAGGACTTCCAGATTTGGCAGAATGTCTGATCTCAACCGCCGAGACGCCTGATGAAGCAGATGACCTTCGCCGATGCCGAGTACGCCG
GCAAGCGTAAGCAGACCCGTAGAGAGCTGTTCCTGATCGAGATGGATCAGGTGGTGCCGTGGAAAGGCTTGATCGCCCTGATCGAGCCACATTATCCAAA
AGGCGAAGGCGGTCGACCGGCCTATCCGTTGATGGCGATGCTGCGCGTACATCTGCTGCAGAACTGGTTTGGCTACAGCGACCCGGCAATGGAAGAGGCG
CTGTATGAAACGACGATCCTGCGCCAGTTTTCTGGACTGAGCCTGGAACGAATCCCGGACGAAACCACCATTCTCAACTTCCGACGTCTACTGGAGAAGC
ATGAGTTGGCGGGTGAGATTCTCGGTGTCATCAATGAGTATCTGGGGGATCGTGGCTTATCGTTGCGTCAGGGCACCATCGTCGATGCCACCTTGATTCA
CGCGCCCAGTTCGACCAAAAACAAGGACGGCAAGCGCGATCCCGAGATGCATCAGACGAAGAAGGGCAATCAGTTTTACTTCGGCGCCAAAGCCCACATC
GGCGTCGATGATGAGTCGGGTCTGGTGCACAGCGTTGTGGTCACGGCAGCCAACGTTGCCGACGTCACTCAGGTCGACAAATTGCTGCACGGTAAGGAAA
ACGTGGTCTGTGCCGATGCCGGTTACACCGGTGTCGAAAAGCGCGAAGAGCACACTGGGCGTGAAGTTATTTGGCAGATTGCAGCCCGGCGCAGCACGTA
TAAGAAGCATGGCAAGCGCAGCGCCTTGTATGAAGCGACCCGCAAGATCGAGAAGGCCAAGGCCCAGGTGCGAGCCAAGGTCGAGCACCCGTTTCGGGTG
ATCAAGCGCCAGTTCGGCTATACGAAAGTACGCTTTCGAGGATTGGCCAAGAACACCGCGCAGATGCTGACGCTATTCGCTTTGTCGAACCTGTGGATGG
CACGCCGACATTTGTTGGCGTGCGCAGGAGAGGTGCGCGCGTAATGCAGGAAATGGCTGCTGCGAAGCACCTTGCAGTGATCGATGGGCCCGAAAAACAG
AGAATGTTGGTCAGGTTTCAACGTACGTCGTTTTTTGATGTGTTGGCTGCTCGATAGCCGGAAAATTTCCGGCTATTTCAGACCATCC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
981 bp326 aa641044+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MKQMTFADAEYAGKRKQTRRELFLIEMDQVVPWKGLIALIEPHYPKGEGGRPAYPLMAMLRVHLLQNWFGYSDPAMEEALYETTILRQFSGLSLERIPDE
TTILNFRRLLEKHELAGEILGVINEYLGDRGLSLRQGTIVDATLIHAPSSTKNKDGKRDPEMHQTKKGNQFYFGAKAHIGVDDESGLVHSVVVTAANVAD
VTQVDKLLHGKENVVCADAGYTGVEKREEHTGREVIWQIAARRSTYKKHGKRSALYEATRKIEKAKAQVRAKVEHPFRVIKRQFGYTKVRFRGLAKNTAQ
MLTLFALSNLWMARRHLLACAGEVRA

 

Blast result :
Comments
ISPmo2 is 97% aa similar to ISPsy2.
References
1] Dongsheng Zhou (2020) Direct submission.
2] Zhou,D. and Chen,F. (2019) Direct GenBank submission.