ISAlw35
- Family IS481
- Group
Isoform Synonym(s)
| Accession number | Transposition | Origin | Host |
|---|---|---|---|
| CP019143 | ND | Acinetobacter lwoffii | Acinetobacter lwoffii Acinetobacter lwoffii ZS207 |
DNA section
IS Length : 1197 bp
Ends
IR Length : 20/26
IRL : TGTATTAGTTCAGACTTGATCGTACATTCTTCTTGAAAAAGAGAAAGTTA
IRR : TGTACTAGCTCAAACCTGATCTGACAGTTACCCATTTTTTATTGTGCCTG
Insertion site
| Left flank | Direct repeat | Right flank | DR Length |
|---|---|---|---|
| tttgggttggtaggagatattaaat | ctaatctccatccaaatcaattgagacact | 0 |
DNA sequence
TGTATTAGTTCAGACTTGATCGTACATTCTTCTTGAAAAAGAGAAAGTTACCCGTTTTGATAAAGGTGTCGAAATCTTAATCAAACAAAGGTAACTTTCT
TATGTTGCATACTAACAATCAAATCATTAAACACAAAGTAGGTCTGCTCAATTTAGCTGAAGAGCTTCAGAATGTATCCAGAGCATGCAAAGTGATGGGT
GTTTCAAGAGATACATTTTATCGCTATCAAGAGTTAGTGAAGTCTGGTGATATTGACGCACTGATCAATAAATCCCGTCGAGTACCAAATTTAAAAAACC
GTGTAGATGATGCTACTGAACAGGCCGTTATTGATTTCGCAATTCAATATCCCGCATATGGTCAGCACCGTACTAGTAATGAATTACGCAAGAAAGGTGT
ATTCGTTTCAGGGAGTGGGGTTCGCTCTATATGGCTTTGTCATGATTTAGAAAACTTTAAGAAGCGTTTAAAAGCACTTGAGGCTAAAGTGGCACAGGAT
GGTACTGAATTAAATGATCAGCAGATTGCGGCACTTGAACGTAAGCATGAGGATGACGTTGCTTGTGTTGAAATCGAAACAGCTCATCCAGGCTATTTAG
GCGCGCAAGACACCTTTTATGTCGGGAATCTCAAAGGTGTTGGACGAATCTACCAACAAACATTCATCGACATTTATAGCAAGGTCGTTCATTGCAAGCT
CTATACAACAAAAACACCGATTACAGCGGCTGATTTACTCAATGATCGTGTGTTGCCATTCTATCAATCTCAGGACTTACCAATGCTTCGCATCCTCACA
GACAGAGGTACTGAGTATTGCGGTAAGGTAGAACAACATGACTATGAGTTGTATCTGGCAGTTAATGATATTGATCACACGAAGACAAAAGCAGCTTCCC
CGCAAACAAATGGTATATGTGAGCGTTTCCATAAGACGATTTTGCAGGAGTTCTATCAAATTACGTTTAGGAAGAAGCTTTATAGCTCATTGGAAGAATT
ACAGGTTGATCTAGACGATTGGCTGAAATTCTATAATACTGAACGGACTCATCAAGGAAAAATGTGCTGTGGTCGTACACCACTTGAAACTTTACTTGAT
GGAAAACGGATTTGGGCTGAGAAGAATTTAGCTCAAATTTAACCTGACAGGCACAATAAAAAATGGGTAACTGTCAGATCAGGTTTGAGCTAGTACA
TATGTTGCATACTAACAATCAAATCATTAAACACAAAGTAGGTCTGCTCAATTTAGCTGAAGAGCTTCAGAATGTATCCAGAGCATGCAAAGTGATGGGT
GTTTCAAGAGATACATTTTATCGCTATCAAGAGTTAGTGAAGTCTGGTGATATTGACGCACTGATCAATAAATCCCGTCGAGTACCAAATTTAAAAAACC
GTGTAGATGATGCTACTGAACAGGCCGTTATTGATTTCGCAATTCAATATCCCGCATATGGTCAGCACCGTACTAGTAATGAATTACGCAAGAAAGGTGT
ATTCGTTTCAGGGAGTGGGGTTCGCTCTATATGGCTTTGTCATGATTTAGAAAACTTTAAGAAGCGTTTAAAAGCACTTGAGGCTAAAGTGGCACAGGAT
GGTACTGAATTAAATGATCAGCAGATTGCGGCACTTGAACGTAAGCATGAGGATGACGTTGCTTGTGTTGAAATCGAAACAGCTCATCCAGGCTATTTAG
GCGCGCAAGACACCTTTTATGTCGGGAATCTCAAAGGTGTTGGACGAATCTACCAACAAACATTCATCGACATTTATAGCAAGGTCGTTCATTGCAAGCT
CTATACAACAAAAACACCGATTACAGCGGCTGATTTACTCAATGATCGTGTGTTGCCATTCTATCAATCTCAGGACTTACCAATGCTTCGCATCCTCACA
GACAGAGGTACTGAGTATTGCGGTAAGGTAGAACAACATGACTATGAGTTGTATCTGGCAGTTAATGATATTGATCACACGAAGACAAAAGCAGCTTCCC
CGCAAACAAATGGTATATGTGAGCGTTTCCATAAGACGATTTTGCAGGAGTTCTATCAAATTACGTTTAGGAAGAAGCTTTATAGCTCATTGGAAGAATT
ACAGGTTGATCTAGACGATTGGCTGAAATTCTATAATACTGAACGGACTCATCAAGGAAAAATGTGCTGTGGTCGTACACCACTTGAAACTTTACTTGAT
GGAAAACGGATTTGGGCTGAGAAGAATTTAGCTCAAATTTAACCTGACAGGCACAATAAAAAATGGGTAACTGTCAGATCAGGTTTGAGCTAGTACA
Protein section
ORF number : 1
ORF 1
| Length | Begin | End | Strand | Fusion ORF | |
|---|---|---|---|---|---|
| 1041 bp | 346 aa | 102 | 1142 | + | No |
Chemistry : DDE
ORF sequence :
MLHTNNQIIKHKVGLLNLAEELQNVSRACKVMGVSRDTFYRYQELVKSGDIDALINKSRRVPNLKNRVDDATEQAVIDFAIQYPAYGQHRTSNELRKKGV
FVSGSGVRSIWLCHDLENFKKRLKALEAKVAQDGTELNDQQIAALERKHEDDVACVEIETAHPGYLGAQDTFYVGNLKGVGRIYQQTFIDIYSKVVHCKL
YTTKTPITAADLLNDRVLPFYQSQDLPMLRILTDRGTEYCGKVEQHDYELYLAVNDIDHTKTKAASPQTNGICERFHKTILQEFYQITFRKKLYSSLEEL
QVDLDDWLKFYNTERTHQGKMCCGRTPLETLLDGKRIWAEKNLAQI
FVSGSGVRSIWLCHDLENFKKRLKALEAKVAQDGTELNDQQIAALERKHEDDVACVEIETAHPGYLGAQDTFYVGNLKGVGRIYQQTFIDIYSKVVHCKL
YTTKTPITAADLLNDRVLPFYQSQDLPMLRILTDRGTEYCGKVEQHDYELYLAVNDIDHTKTKAASPQTNGICERFHKTILQEFYQITFRKKLYSSLEEL
QVDLDDWLKFYNTERTHQGKMCCGRTPLETLLDGKRIWAEKNLAQI
Blast result :
Comments
ISAlw35 is 92% aa similar to ISSod13.
The closest relatives of ISAlw35 (99% similar) occur in Acinetobacter johnsonii LXL_C1 (CP031011.1), Acinetobacter sp. LoGeW2-3 (CP024011.1) chromosome and Acinetobacter pittii 2014N21-145 plasmid p2014N21-145-1 (CP033569.1).
The closest relatives of ISAlw35 (99% similar) occur in Acinetobacter johnsonii LXL_C1 (CP031011.1), Acinetobacter sp. LoGeW2-3 (CP024011.1) chromosome and Acinetobacter pittii 2014N21-145 plasmid p2014N21-145-1 (CP033569.1).
References