ISPlge4

  • Family IS110
  • Group IS1111
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
CP014777 ND Pluralibacter gergoviae
Pluralibacter gergoviae
Pluralibacter gergoviae FB2
DNA section
IS Length : 1342 bp

Ends


IR Length : 13

IRL : TAATGAGATGGTCACCCCCACCCTGTAGCGGTAAGCTGACAGGGTGTTTT
IRR : TCTATGGTCACCCCCATTTTTGCAAGACTGTTTTTTGACTAATGATGGCT

Comments : IRs are not at the termini of the sequence according to the rules of this group.

Insertion site


Left flankDirect repeatRight flankDR Length
TTAACTACGGGGCTTTCTGCTTTCTG0

DNA sequence

TAATGAGATGGTCACCCCCACCCTGTAGCGGTAAGCTGACAGGGTGTTTTGTTTTGGGAGAACCATCATGAATAACGTCTCTTTGATTGGTATTGATCTC
GGCAAAAATTCATTCCACGTCCATTGCCAGGACGCCACAGGCAAAGCTCTTAGCCGTAAAAAATTCACGCGAGCGAAATTATTCGAATTTCTTGCCAATT
GCCCTTCTGCAACTGTTGTTATGGAAGCCTGTGCAGGAGCTCACTATATAGCTCGTAAAATTTCTGACATGGGTCATAAACCAAAGCTGATTTCTCCTCA
ATTTGTCCGGCCATTCGTTAAAAGCAATAAGAATGATTTCGTTGATGCTGAAGCCATATGTGAAGCGGCATCAAGACCATCGATGCGATTTGTAGCACCA
AGAACTGAGTCCCAGCAGGAAATACTTGCTTTACATCGCATACGAGAATCTCTCGTCAGAGATAAAGTCAAAACAACCAACCAAATGCATGCTTTTTTAC
TCGAATTTGGGATCAGCATGCCAAAAGGTCTTGCAGTTATACGGAGACTATCCGTAGTCCTCACGGAAAATGAATTGCCTCCCTATTTGGCAAAATTGTT
AGTGAAGTTACAGAGCCATTATTTATATCTGGTTGAACAAATTCGCGATATAGAAAATGAACTAAAACTAGCAGCGAATCAAGATGATACAACCCAAAGG
CTTATGTCTATCCCTTCAGTTGGCCCGATTACAGCAAGCGTCCTGATGGCAAACCTCGGTAACGGTCAACAATATAAACAGAGCAGGGATTTTGCTGCGG
CAACTGGTCTTGTCCCCAGGCAATACAGCACTGGCGGCCGACCAACATTGTTAGGGATCAGTAAGCGGGGAAACAAAAATTTGCGAAGGTTATTAGTACA
ATGTGCAAGGGTGTACATCCTTCACCTCGAGCATCAGTCGGGTTATCTGGCAGAATGGGTGAGACACCAACTATCAAAAAAACACTCATGCGTTGTAGCT
TGCGGTCTGGCAAATAAACTCGCACGAATTGCCTGGGCGATTACGACAAAACAGAGCGTATATATGGCTTAGTTTTTTTATAGATTCACTAAAATTTGTT
GAAACAGCAGTTACCACCTGGTTTTGCGAAGACTGGAAATTGATGACATGAACGGCAAACCGGCCAGATGAAAAACCCTTTAAAGCAGATAGGCTCTATG
AAGCCGCGGGCTTTTTTATGGTTCATCTGGCGCAGACCTCATCGTGGCGCAGGTACATGTTACCTATAAACGACGCCGGATAGATTCAAGCAAGCCATCA
TTAGTCAAAAAACAGTCTTGCAAAAATGGGGGTGACCATAGA
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1005 bp334 aa681072+No
ORF function : Transposase
Chemistry : DEDD

ORF sequence :

MNNVSLIGIDLGKNSFHVHCQDATGKALSRKKFTRAKLFEFLANCPSATVVMEACAGAHYIARKISDMGHKPKLISPQFVRPFVKSNKNDFVDAEAICEA
ASRPSMRFVAPRTESQQEILALHRIRESLVRDKVKTTNQMHAFLLEFGISMPKGLAVIRRLSVVLTENELPPYLAKLLVKLQSHYLYLVEQIRDIENELK
LAANQDDTTQRLMSIPSVGPITASVLMANLGNGQQYKQSRDFAAATGLVPRQYSTGGRPTLLGISKRGNKNLRRLLVQCARVYILHLEHQSGYLAEWVRH
QLSKKHSCVVACGLANKLARIAWAITTKQSVYMA

 

Blast result :
Comments
ISPlge4 is 87% aa similar to ISplu13.
References
1] Zhe Zhan (2018) Direct submission.
2] Tan,J.-Y. and Chan,K.-G. (2016) Direct GenBank submission.