ISPlge2
- Family IS21
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
CP014777 | ND | Pluralibacter gergoviae | Pluralibacter gergoviae Pluralibacter gergoviae strain FB2 |
DNA section
IS Length : 2409 bp
Ends
IR Length : 34/46
IRL : TATTAGGCGACAATTACCCCGTCCGCTTCGCGACAATTACTCTGGCCTGT
IRR : TATTAGACGTCAACTACCTTGGCCGGTACGCGTCAACTACTCTGGCCGCC
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
CTTCAGCACGAA | ACCTGCC | CAAGCAGCACCAAT | 7 |
DNA sequence
TATTAGGCGACAATTACCCCGTCCGCTTCGCGACAATTACTCTGGCCTGTTTGTAATCTGAGCGTCCTGTTTCTTCTTTCCAGGGAGAGGTTGTGACGCT
GAATACCAGACAGGTCAGTTTTTACATGGCTCAACGTAATAAAGGTCTTACGCAGGAAGCCGCTGCGGCCACCACCGGCATCTCTGTTCGCTCCGGACGA
CGTATTGAAAAAGGGCAGTGGCAATCATCAGGTGAGCGACACTGGCGGACACGTCAGGATCCTCTGGAAGCGGTCTGGCTCAGTGATGTGCTTCCTTTAC
TCGCTTCCCGTCCGCAGATCTCGCCGACAACGGTTCTCGAATATCTGCAGGATAAATATCCGGGCCAGTATCCCGATAAGGTGCGCCGGACGCTGCAGCG
CCGTATCCGTACCTGGAAAGCCTGCCACGGTGAGGAACGGGAGATCATGTTCCGCCAGGAGCATCAACCGGGAATGCGGGCGCTGTCAGATTTTACCCAG
CTGAAAGGCACGGTTATCACCATTAACGGCTGCCCGCTGGAACACAAGCTCTTCCACTTCCGCCTTGAATGGAGTCGCTGGAGCTGGATGCGGGTTGTCA
CCGGCGGCGAGAGCTTCACCGCTCTGGCCGAAGGACTACAGGAGGCGCTGGGTCAGCTGGGTGGTGTACCAGCGGAGCACCGTACAGATAGTCTGGCCGC
AGCATGGAAAAACCTGAGCGAGGAAGACCACCGGGATCAGACAGCGCGCTATGCCGGGTTGTGTGAACACTACGGCATGACCCCTTCCCGCAATAACAGC
GGACGGGGCCATGAGAATGGTTCAGTGGAGTCGGCTCACGGACACCTCAAGGAGCGTATACGGCAGGCCCTGCTGCTGCGCGGAAATAACGACTTCGGTT
CCCTGAATGAATATCGTCAGTTCGTTACACAGCAGGTGCTGCGTCATAACCAGCGCAATCAGGATCTGGTCCGTCAGGAACTGGCACTTCTGAAGCCCCT
TCCTCAGCGACGGTGTGCTGACTACGAAGAGTTGTCTGTCCGGGTCAGCAGCAGTAGTACCATCAACGTCCGGCACGTTGTGTACAGCGTGCCATCCAGA
CTTATCGGACAGATGCTGAAGGTTCGTCTGTGGGATGACAGACTGAGTTGTTACGTTGGAAGCGATGAAGTAATGAGCTGTCAGCGGATCCGGGCACCGA
AAGGTAAACGGCGGGCCCGCAGTATCAACTTCCGACACGTGATCGGTAGTCTTGTCATGAAACCCGGGGCGTTCTATCACGCCACACTGCGTAACGACAT
CCTGCCGGATGATGAATGGCGGCAGCTGTGGCAGCGGATGTGTTCACGTCTTGCCCCTCAGCTGGCCAGTCGCCTGATGGTTAATGCCCTGAAGCTGGCG
GCAGAGCGGGAAGACATCTCAGCGGTCGCGAAGGGGCTGAACCACCTGCTGCTGGAGCCGGGAGAGCCGGATCTGCAGAAGCTGCTCAACTGGCTGGGCG
TGAAGGATAAACGCCCGCTGCCGGACGGGAAACTGGTTCAGCACAGCCTGCAGGGTTATGACAACCTGATGCGTAAAGGAGGCCTGCAGTGACCGATATC
CATACGCTTGAAAGGTTGCTCAGAAGGTTACGTCTGACGCGCATAGCCACCGAGTGGCACAGCCAGGAGAAACGCGCGCTGGCCGAAGGGTGGACCCCTT
CGCGTTATCTGCTGTCACTCTGCAGTGAAGAGGCGACGCACAGGGAAAGCGAACGGCTGCGGCGGTATATAAAGGATGCGCGGTTGCCAGTGGGGAAAAC
GCTGGCCGAATATGACTTCGGCCAGGTCCCGGAGCTGAATGCCGCACAGGTGCGTCAGCTGTGTGAAACGACGGACTGGGTGGACAGCGGGGAGAATGTC
CTGCTGTTCGGTGCCAGCGGTCTGGGCAAAAGCCACCTTGCCGCAGCGATCGCGGACGGCGTAGTGAGCCAGGGCTATCGGGTCCGGTTCTACAGCGCCG
GCGAGTTGTTGCAGGAGCTGCGTAAAGCCCGGTCGTTGCTGAGGCTGAACGAGATGCTTCTGAAGCTGGATCGCTACCGGGTGATAGTGATAGACGACCT
GGGCTATGTCAAACGGGATAACGCGGAAACGGGCGTGCTGTTCGAACTTATCGCGCACCGGTACGAAAGAGGAAGTCTGATCATCACAAGTAACCATCCG
TTCAGCACATGGGGCAGTATCTTCGTGGACGAAACAATGGCGGTGGCAGCGGCGGACAGGCTGATCCACCACGGGTACATCTTCGAAGTTACAGGAGAAA
GTTACAGAAAGAAAACATCAAAAGCAGTCACCCAGCAGTCAGCTAAGAAATAACTCAAAGGCGGCCAGAGTAGTTGACGCGTACCGGCCAAGGTAGTTGA
CGTCTAATA
GAATACCAGACAGGTCAGTTTTTACATGGCTCAACGTAATAAAGGTCTTACGCAGGAAGCCGCTGCGGCCACCACCGGCATCTCTGTTCGCTCCGGACGA
CGTATTGAAAAAGGGCAGTGGCAATCATCAGGTGAGCGACACTGGCGGACACGTCAGGATCCTCTGGAAGCGGTCTGGCTCAGTGATGTGCTTCCTTTAC
TCGCTTCCCGTCCGCAGATCTCGCCGACAACGGTTCTCGAATATCTGCAGGATAAATATCCGGGCCAGTATCCCGATAAGGTGCGCCGGACGCTGCAGCG
CCGTATCCGTACCTGGAAAGCCTGCCACGGTGAGGAACGGGAGATCATGTTCCGCCAGGAGCATCAACCGGGAATGCGGGCGCTGTCAGATTTTACCCAG
CTGAAAGGCACGGTTATCACCATTAACGGCTGCCCGCTGGAACACAAGCTCTTCCACTTCCGCCTTGAATGGAGTCGCTGGAGCTGGATGCGGGTTGTCA
CCGGCGGCGAGAGCTTCACCGCTCTGGCCGAAGGACTACAGGAGGCGCTGGGTCAGCTGGGTGGTGTACCAGCGGAGCACCGTACAGATAGTCTGGCCGC
AGCATGGAAAAACCTGAGCGAGGAAGACCACCGGGATCAGACAGCGCGCTATGCCGGGTTGTGTGAACACTACGGCATGACCCCTTCCCGCAATAACAGC
GGACGGGGCCATGAGAATGGTTCAGTGGAGTCGGCTCACGGACACCTCAAGGAGCGTATACGGCAGGCCCTGCTGCTGCGCGGAAATAACGACTTCGGTT
CCCTGAATGAATATCGTCAGTTCGTTACACAGCAGGTGCTGCGTCATAACCAGCGCAATCAGGATCTGGTCCGTCAGGAACTGGCACTTCTGAAGCCCCT
TCCTCAGCGACGGTGTGCTGACTACGAAGAGTTGTCTGTCCGGGTCAGCAGCAGTAGTACCATCAACGTCCGGCACGTTGTGTACAGCGTGCCATCCAGA
CTTATCGGACAGATGCTGAAGGTTCGTCTGTGGGATGACAGACTGAGTTGTTACGTTGGAAGCGATGAAGTAATGAGCTGTCAGCGGATCCGGGCACCGA
AAGGTAAACGGCGGGCCCGCAGTATCAACTTCCGACACGTGATCGGTAGTCTTGTCATGAAACCCGGGGCGTTCTATCACGCCACACTGCGTAACGACAT
CCTGCCGGATGATGAATGGCGGCAGCTGTGGCAGCGGATGTGTTCACGTCTTGCCCCTCAGCTGGCCAGTCGCCTGATGGTTAATGCCCTGAAGCTGGCG
GCAGAGCGGGAAGACATCTCAGCGGTCGCGAAGGGGCTGAACCACCTGCTGCTGGAGCCGGGAGAGCCGGATCTGCAGAAGCTGCTCAACTGGCTGGGCG
TGAAGGATAAACGCCCGCTGCCGGACGGGAAACTGGTTCAGCACAGCCTGCAGGGTTATGACAACCTGATGCGTAAAGGAGGCCTGCAGTGACCGATATC
CATACGCTTGAAAGGTTGCTCAGAAGGTTACGTCTGACGCGCATAGCCACCGAGTGGCACAGCCAGGAGAAACGCGCGCTGGCCGAAGGGTGGACCCCTT
CGCGTTATCTGCTGTCACTCTGCAGTGAAGAGGCGACGCACAGGGAAAGCGAACGGCTGCGGCGGTATATAAAGGATGCGCGGTTGCCAGTGGGGAAAAC
GCTGGCCGAATATGACTTCGGCCAGGTCCCGGAGCTGAATGCCGCACAGGTGCGTCAGCTGTGTGAAACGACGGACTGGGTGGACAGCGGGGAGAATGTC
CTGCTGTTCGGTGCCAGCGGTCTGGGCAAAAGCCACCTTGCCGCAGCGATCGCGGACGGCGTAGTGAGCCAGGGCTATCGGGTCCGGTTCTACAGCGCCG
GCGAGTTGTTGCAGGAGCTGCGTAAAGCCCGGTCGTTGCTGAGGCTGAACGAGATGCTTCTGAAGCTGGATCGCTACCGGGTGATAGTGATAGACGACCT
GGGCTATGTCAAACGGGATAACGCGGAAACGGGCGTGCTGTTCGAACTTATCGCGCACCGGTACGAAAGAGGAAGTCTGATCATCACAAGTAACCATCCG
TTCAGCACATGGGGCAGTATCTTCGTGGACGAAACAATGGCGGTGGCAGCGGCGGACAGGCTGATCCACCACGGGTACATCTTCGAAGTTACAGGAGAAA
GTTACAGAAAGAAAACATCAAAAGCAGTCACCCAGCAGTCAGCTAAGAAATAACTCAAAGGCGGCCAGAGTAGTTGACGCGTACCGGCCAAGGTAGTTGA
CGTCTAATA
Protein section
ORF number : 2
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1500 bp | 499 aa | 93 | 1592 | + | No |
Chemistry : DDE
ORF sequence :
MTLNTRQVSFYMAQRNKGLTQEAAAATTGISVRSGRRIEKGQWQSSGERHWRTRQDPLEAVWLSDVLPLLASRPQISPTTVLEYLQDKYPGQYPDKVRRT
LQRRIRTWKACHGEEREIMFRQEHQPGMRALSDFTQLKGTVITINGCPLEHKLFHFRLEWSRWSWMRVVTGGESFTALAEGLQEALGQLGGVPAEHRTDS
LAAAWKNLSEEDHRDQTARYAGLCEHYGMTPSRNNSGRGHENGSVESAHGHLKERIRQALLLRGNNDFGSLNEYRQFVTQQVLRHNQRNQDLVRQELALL
KPLPQRRCADYEELSVRVSSSSTINVRHVVYSVPSRLIGQMLKVRLWDDRLSCYVGSDEVMSCQRIRAPKGKRRARSINFRHVIGSLVMKPGAFYHATLR
NDILPDDEWRQLWQRMCSRLAPQLASRLMVNALKLAAEREDISAVAKGLNHLLLEPGEPDLQKLLNWLGVKDKRPLPDGKLVQHSLQGYDNLMRKGGLQ
LQRRIRTWKACHGEEREIMFRQEHQPGMRALSDFTQLKGTVITINGCPLEHKLFHFRLEWSRWSWMRVVTGGESFTALAEGLQEALGQLGGVPAEHRTDS
LAAAWKNLSEEDHRDQTARYAGLCEHYGMTPSRNNSGRGHENGSVESAHGHLKERIRQALLLRGNNDFGSLNEYRQFVTQQVLRHNQRNQDLVRQELALL
KPLPQRRCADYEELSVRVSSSSTINVRHVVYSVPSRLIGQMLKVRLWDDRLSCYVGSDEVMSCQRIRAPKGKRRARSINFRHVIGSLVMKPGAFYHATLR
NDILPDDEWRQLWQRMCSRLAPQLASRLMVNALKLAAEREDISAVAKGLNHLLLEPGEPDLQKLLNWLGVKDKRPLPDGKLVQHSLQGYDNLMRKGGLQ
Blast result :ORF 2
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
765 bp | 254 aa | 1589 | 2353 | + | No |
AG : IS21 helper
ORF sequence :
MTDIHTLERLLRRLRLTRIATEWHSQEKRALAEGWTPSRYLLSLCSEEATHRESERLRRYIKDARLPVGKTLAEYDFGQVPELNAAQVRQLCETTDWVDS
GENVLLFGASGLGKSHLAAAIADGVVSQGYRVRFYSAGELLQELRKARSLLRLNEMLLKLDRYRVIVIDDLGYVKRDNAETGVLFELIAHRYERGSLIIT
SNHPFSTWGSIFVDETMAVAAADRLIHHGYIFEVTGESYRKKTSKAVTQQSAKK
GENVLLFGASGLGKSHLAAAIADGVVSQGYRVRFYSAGELLQELRKARSLLRLNEMLLKLDRYRVIVIDDLGYVKRDNAETGVLFELIAHRYERGSLIIT
SNHPFSTWGSIFVDETMAVAAADRLIHHGYIFEVTGESYRKKTSKAVTQQSAKK
Blast result :
Comments
ISPlge2 is 81% aa (transposase) similar to ISEc10.
References
1] Zhe Zhan (2018) Direct submission.
2] Tan,J.-Y. and Chan,K.-G. (2016) Direct GenBank submission.
2] Tan,J.-Y. and Chan,K.-G. (2016) Direct GenBank submission.