ISRor3

  • Family ISNCY
  • Group ISPlu15
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
ND Raoultella ornithinolytica
Raoultella ornithinolytica
Klebsiella grimontii WCHKG020121 plasmid pKPC2_020121
DNA section
IS Length : 1019 bp

Ends


IR Length : 8/12

IRL : CAATTTTCAGAGCCAGGGCTGATGAAGAAGAAAAACAGCACACCCACTCC
IRR : CAGTATTCACTGATGGCCGGACAGGGAGTGCCAGGAAAGGGGGATTAGTG

Insertion site


Left flankDirect repeatRight flankDR Length
CTGTGATAGCATATCCGGGTGTGGGGCAGGGAGGCACCAG0

DNA sequence

CAATTTTCAGAGCCAGGGCTGATGAAGAAGAAAAACAGCACACCCACTCCTCACGATGCTACGTTCAGGCAGTTTCTGACGCAACCGGATATTGCCCGGG
ATTTCATGGAGCTGCACCTCCCGGCAGAGCTGCAGGCCATCTGCGACCTCAGCACACTGAAACTGGAATCCGGCTCGTTTATTGAGGATGATCTCCGCCA
GTATTTCAGCGACGTTCTCTACAGCCTGAAAACTACCGCCGGGGATGGCTACGTTCACGTGCTCATTGAGCATCAGTCCTCACCCGACAAACATATGGCT
TTTCGCCTGATACGCTATGCGGTGGCCGCCATGCAGCGACACCTGGAAGCTGGCCATAAGAAGCTGCCACTGGTGATACCGGTCCTTTTCTATACCGGTA
AACGCAGCCCGTATCCGTACTCCACCCGCTGGCTGGATGAGTTTGACGACCCGATTCTGGCCGGAACACTCTACAGCAGCGCTTTCCCGCTGGTAGACGT
CACGGTCATTCCGGATGATGAAATCGCCGGGCATCGCAGTATGGCTGCCCTGACCTTGCTGCAGAAACATATTCATCAGCGCGATCTCGCTGAACTGGTT
GACCGCCTGGCGCCCATTTTGCTGGCCGGATATCTGTCTTCATCACAGGTAGTATCGCTGGTACACTATATCGTGCAGGCAGGTGAAACATCGGACGCCG
AAGCCTTTGTACGCGAACTGGCACAGCGTGTGCCGCAACACGGAGACGCCCTCATGACGATCGCACAACAGCTCGAGCAAAAAGGTATTGAGAAGGGTAT
CCAGCAGGGGATCGAGCAGGGCATCCAGCTGGGTGAACAACGTGGTATTGAAAAAGGCGAGCGCGAAGCTACTCTTAAAATTGCCCGTACCATGCTGCAG
AACGGCATTGACCGCAATACTGTCATGAAAGTGACCGGTCTGACGGAAGAAGACCTGGCGCAGATCCGCCACTAATCCCCCTTTCCTGGCACTCCCTGTC
CGGCCATCAGTGAATACTG
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
954 bp317 aa22975+No
ORF function : Transposase
Chemistry : Unknow

ORF sequence :

MKKKNSTPTPHDATFRQFLTQPDIARDFMELHLPAELQAICDLSTLKLESGSFIEDDLRQYFSDVLYSLKTTAGDGYVHVLIEHQSSPDKHMAFRLIRYA
VAAMQRHLEAGHKKLPLVIPVLFYTGKRSPYPYSTRWLDEFDDPILAGTLYSSAFPLVDVTVIPDDEIAGHRSMAALTLLQKHIHQRDLAELVDRLAPIL
LAGYLSSSQVVSLVHYIVQAGETSDAEAFVRELAQRVPQHGDALMTIAQQLEQKGIEKGIQQGIEQGIQLGEQRGIEKGEREATLKIARTMLQNGIDRNT
VMKVTGLTEEDLAQIRH

 

Blast result :
Comments
ISRor3 is 95% aa similar to ISSen7.
There is an ambiguity about the ends of this sequence, no clear evidence.
References
1] Dongsheng Zhou (2018) Direct submission.