ISRor3
- Family ISNCY
- Group ISPlu15
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
ND | Raoultella ornithinolytica | Raoultella ornithinolytica Klebsiella grimontii WCHKG020121 plasmid pKPC2_020121 |
DNA section
IS Length : 1019 bp
Ends
IR Length : 8/12
IRL : CAATTTTCAGAGCCAGGGCTGATGAAGAAGAAAAACAGCACACCCACTCC
IRR : CAGTATTCACTGATGGCCGGACAGGGAGTGCCAGGAAAGGGGGATTAGTG
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
CTGTGATAGCATATCCGGGT | GTGGGGCAGGGAGGCACCAG | 0 |
DNA sequence
CAATTTTCAGAGCCAGGGCTGATGAAGAAGAAAAACAGCACACCCACTCCTCACGATGCTACGTTCAGGCAGTTTCTGACGCAACCGGATATTGCCCGGG
ATTTCATGGAGCTGCACCTCCCGGCAGAGCTGCAGGCCATCTGCGACCTCAGCACACTGAAACTGGAATCCGGCTCGTTTATTGAGGATGATCTCCGCCA
GTATTTCAGCGACGTTCTCTACAGCCTGAAAACTACCGCCGGGGATGGCTACGTTCACGTGCTCATTGAGCATCAGTCCTCACCCGACAAACATATGGCT
TTTCGCCTGATACGCTATGCGGTGGCCGCCATGCAGCGACACCTGGAAGCTGGCCATAAGAAGCTGCCACTGGTGATACCGGTCCTTTTCTATACCGGTA
AACGCAGCCCGTATCCGTACTCCACCCGCTGGCTGGATGAGTTTGACGACCCGATTCTGGCCGGAACACTCTACAGCAGCGCTTTCCCGCTGGTAGACGT
CACGGTCATTCCGGATGATGAAATCGCCGGGCATCGCAGTATGGCTGCCCTGACCTTGCTGCAGAAACATATTCATCAGCGCGATCTCGCTGAACTGGTT
GACCGCCTGGCGCCCATTTTGCTGGCCGGATATCTGTCTTCATCACAGGTAGTATCGCTGGTACACTATATCGTGCAGGCAGGTGAAACATCGGACGCCG
AAGCCTTTGTACGCGAACTGGCACAGCGTGTGCCGCAACACGGAGACGCCCTCATGACGATCGCACAACAGCTCGAGCAAAAAGGTATTGAGAAGGGTAT
CCAGCAGGGGATCGAGCAGGGCATCCAGCTGGGTGAACAACGTGGTATTGAAAAAGGCGAGCGCGAAGCTACTCTTAAAATTGCCCGTACCATGCTGCAG
AACGGCATTGACCGCAATACTGTCATGAAAGTGACCGGTCTGACGGAAGAAGACCTGGCGCAGATCCGCCACTAATCCCCCTTTCCTGGCACTCCCTGTC
CGGCCATCAGTGAATACTG
ATTTCATGGAGCTGCACCTCCCGGCAGAGCTGCAGGCCATCTGCGACCTCAGCACACTGAAACTGGAATCCGGCTCGTTTATTGAGGATGATCTCCGCCA
GTATTTCAGCGACGTTCTCTACAGCCTGAAAACTACCGCCGGGGATGGCTACGTTCACGTGCTCATTGAGCATCAGTCCTCACCCGACAAACATATGGCT
TTTCGCCTGATACGCTATGCGGTGGCCGCCATGCAGCGACACCTGGAAGCTGGCCATAAGAAGCTGCCACTGGTGATACCGGTCCTTTTCTATACCGGTA
AACGCAGCCCGTATCCGTACTCCACCCGCTGGCTGGATGAGTTTGACGACCCGATTCTGGCCGGAACACTCTACAGCAGCGCTTTCCCGCTGGTAGACGT
CACGGTCATTCCGGATGATGAAATCGCCGGGCATCGCAGTATGGCTGCCCTGACCTTGCTGCAGAAACATATTCATCAGCGCGATCTCGCTGAACTGGTT
GACCGCCTGGCGCCCATTTTGCTGGCCGGATATCTGTCTTCATCACAGGTAGTATCGCTGGTACACTATATCGTGCAGGCAGGTGAAACATCGGACGCCG
AAGCCTTTGTACGCGAACTGGCACAGCGTGTGCCGCAACACGGAGACGCCCTCATGACGATCGCACAACAGCTCGAGCAAAAAGGTATTGAGAAGGGTAT
CCAGCAGGGGATCGAGCAGGGCATCCAGCTGGGTGAACAACGTGGTATTGAAAAAGGCGAGCGCGAAGCTACTCTTAAAATTGCCCGTACCATGCTGCAG
AACGGCATTGACCGCAATACTGTCATGAAAGTGACCGGTCTGACGGAAGAAGACCTGGCGCAGATCCGCCACTAATCCCCCTTTCCTGGCACTCCCTGTC
CGGCCATCAGTGAATACTG
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
954 bp | 317 aa | 22 | 975 | + | No |
Chemistry : Unknow
ORF sequence :
MKKKNSTPTPHDATFRQFLTQPDIARDFMELHLPAELQAICDLSTLKLESGSFIEDDLRQYFSDVLYSLKTTAGDGYVHVLIEHQSSPDKHMAFRLIRYA
VAAMQRHLEAGHKKLPLVIPVLFYTGKRSPYPYSTRWLDEFDDPILAGTLYSSAFPLVDVTVIPDDEIAGHRSMAALTLLQKHIHQRDLAELVDRLAPIL
LAGYLSSSQVVSLVHYIVQAGETSDAEAFVRELAQRVPQHGDALMTIAQQLEQKGIEKGIQQGIEQGIQLGEQRGIEKGEREATLKIARTMLQNGIDRNT
VMKVTGLTEEDLAQIRH
VAAMQRHLEAGHKKLPLVIPVLFYTGKRSPYPYSTRWLDEFDDPILAGTLYSSAFPLVDVTVIPDDEIAGHRSMAALTLLQKHIHQRDLAELVDRLAPIL
LAGYLSSSQVVSLVHYIVQAGETSDAEAFVRELAQRVPQHGDALMTIAQQLEQKGIEKGIQQGIEQGIQLGEQRGIEKGEREATLKIARTMLQNGIDRNT
VMKVTGLTEEDLAQIRH
Blast result :
Comments
ISRor3 is 95% aa similar to ISSen7.
There is an ambiguity about the ends of this sequence, no clear evidence.
There is an ambiguity about the ends of this sequence, no clear evidence.
References
1] Dongsheng Zhou (2018) Direct submission.