ISTeha4
- Family IS4
- Group ISPepr1
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
LC430898 | Y | Tetragenococcus halophilus | Tetragenococcus halophilus NBRC 12172 Tetragenococcus halophilus Tetragenococcus halophilus KUD23 Tetragenococcus halophilus plasmid pTDC-B Tetragenococcus halophilus plasmid pTDC-A Tetragenococcus halophilus plasmid pHDC-RI |
DNA section
IS Length : 1567 bp
Ends
IR Length : 13
IRL : CTAAAACTTGAAAGTTCAAAAATACAGTTCATCCCTTGATAAATAAACGT
IRR : CTAAAACTTGAAACCTACTTTTCGATACGTATCCCTTGGTATACCAAGGA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
CAACATAAGG | ATAATAA | ATTATCCAAT | 7 |
TTAGGTATAC | TAACAATAA | TACTAAATGG | 9 |
CAAAAATTTAGCTTAGACAT | TACTTATGAAGAGCAAAAAG | 0 |
DNA sequence
CTAAAACTTGAAAGTTCAAAAATACAGTTCATCCCTTGATAAATAAACGTTTTTTGATACAAAAATAGCATGAACGACTCAAAACTTGGTATAATAGAAT
TACCAAAAAACCAATAACCAAGGAGTGTTCATGCCATGTCAATTATAACACAAAAAACGTCAAATTCAGAAAAAATTTCTACCTCTGTGTCTGATTTTTT
TCATCGGTTCCATGTAGCTTCTGCGTTGAAAAAATCAAACGCAGTCCATAAAAGGGGTTTTTCGGTTCCTGTTATTTTTTCTTTTTTATTGGCCTCGATC
TTTACCAACGGTTCTACCTATCGGTTTTACCAAAAGCAGAAGGAACAATTGTCTTTTTCGGATAAGACCTTTCGCAATGTCTTGAATGATCCGCACATTC
ATTGGCAAAAATTACTGATCTTAGTGGCTAAATCTGTCATTACTTTCCTACGTCCATTGACGGGTGATGCCCGAAAAACCACATTTATCGTGGATGACTC
CATGTATACCCGCTCGAATGCGAAAAAAGTGGAATGTGCCGCTTTACAATACGACCATGCCAAGAAAAAATATTTCAAAGGATTTCGTTATTTACAATTA
GGCTGGAGTGATGGCAATAGCTTTGTCCCTGTTGCTTTTTCGTTGCTCTCCGGGAAAAGAAAGCTCCAATCTGATCTTGATATCGGGGATCAACGCACGA
ATAGGGGGAAACGTAAAGCTCAAGCGCTTCGTAAAGGCACGGAAGTGACACTGGAACTGCTTCGATCGGCTTTGAACCAAGGGATCTCTGCAGATTATGT
TTTATTTGACACCTGGTTTTCCAGTCCCAAAATGTTCCAACAGGTCCGTGACCTGAAATGCCACTGCGTAGCGATGGTTAAACGTAGTCAAAAGATCTAC
TATCGTTATCAAGGCCAAAAGATGGATGTCAAAGAAATCTTCAAACGAAATAAAAAGCGCCGCGGTCGTTCTCGCTATCTTTTGAGTGTCCAAGTAGAAG
CTGTCGTAGAAGGGAAAATCCTTCCCATTAAGTTGGTATATATTCGCAATCGCAATAAACGAAACGACTATTTGGTCTTAGCTTCGACCGATATCGATCT
GACCGAAGACGAGATCATTCAGCTCTATGCTAGACGCTGGTCGGTGGAAGTCTACTTCAAGATGTGCAAACAATACTTAAAATTAGCCAAGTACCAAGGG
ATTTCTTATGACGGGATCTTTGCGCATACGACACTGGTAGCTATCGGTTATATGATCCTAGCGGTGCAAGAACGTGAAAGTAAAGACGACCGAACGCTTG
GCGAGTTATTTTATCTTCTCATTGATGAGCTTTCTGAGCTTTCTGTATCGGAAGCCATTCTGCAATTACTCGTTTTATTCCAAGAAGCTTTTGCGGATGA
ATATGTTTTGGATGAAGCCGTATTAAATAACATTATCGAACAGTTCCTTGAAAAACTACCTTCCTCTATACAAAAACAGCTCAAGCAAGCAGGTTGAAGT
TAATTTTGTGCATGAGATCCTTGGTATACCAAGGGATACGTATCGAAAAGTAGGTTTCAAGTTTTAG
TACCAAAAAACCAATAACCAAGGAGTGTTCATGCCATGTCAATTATAACACAAAAAACGTCAAATTCAGAAAAAATTTCTACCTCTGTGTCTGATTTTTT
TCATCGGTTCCATGTAGCTTCTGCGTTGAAAAAATCAAACGCAGTCCATAAAAGGGGTTTTTCGGTTCCTGTTATTTTTTCTTTTTTATTGGCCTCGATC
TTTACCAACGGTTCTACCTATCGGTTTTACCAAAAGCAGAAGGAACAATTGTCTTTTTCGGATAAGACCTTTCGCAATGTCTTGAATGATCCGCACATTC
ATTGGCAAAAATTACTGATCTTAGTGGCTAAATCTGTCATTACTTTCCTACGTCCATTGACGGGTGATGCCCGAAAAACCACATTTATCGTGGATGACTC
CATGTATACCCGCTCGAATGCGAAAAAAGTGGAATGTGCCGCTTTACAATACGACCATGCCAAGAAAAAATATTTCAAAGGATTTCGTTATTTACAATTA
GGCTGGAGTGATGGCAATAGCTTTGTCCCTGTTGCTTTTTCGTTGCTCTCCGGGAAAAGAAAGCTCCAATCTGATCTTGATATCGGGGATCAACGCACGA
ATAGGGGGAAACGTAAAGCTCAAGCGCTTCGTAAAGGCACGGAAGTGACACTGGAACTGCTTCGATCGGCTTTGAACCAAGGGATCTCTGCAGATTATGT
TTTATTTGACACCTGGTTTTCCAGTCCCAAAATGTTCCAACAGGTCCGTGACCTGAAATGCCACTGCGTAGCGATGGTTAAACGTAGTCAAAAGATCTAC
TATCGTTATCAAGGCCAAAAGATGGATGTCAAAGAAATCTTCAAACGAAATAAAAAGCGCCGCGGTCGTTCTCGCTATCTTTTGAGTGTCCAAGTAGAAG
CTGTCGTAGAAGGGAAAATCCTTCCCATTAAGTTGGTATATATTCGCAATCGCAATAAACGAAACGACTATTTGGTCTTAGCTTCGACCGATATCGATCT
GACCGAAGACGAGATCATTCAGCTCTATGCTAGACGCTGGTCGGTGGAAGTCTACTTCAAGATGTGCAAACAATACTTAAAATTAGCCAAGTACCAAGGG
ATTTCTTATGACGGGATCTTTGCGCATACGACACTGGTAGCTATCGGTTATATGATCCTAGCGGTGCAAGAACGTGAAAGTAAAGACGACCGAACGCTTG
GCGAGTTATTTTATCTTCTCATTGATGAGCTTTCTGAGCTTTCTGTATCGGAAGCCATTCTGCAATTACTCGTTTTATTCCAAGAAGCTTTTGCGGATGA
ATATGTTTTGGATGAAGCCGTATTAAATAACATTATCGAACAGTTCCTTGAAAAACTACCTTCCTCTATACAAAAACAGCTCAAGCAAGCAGGTTGAAGT
TAATTTTGTGCATGAGATCCTTGGTATACCAAGGGATACGTATCGAAAAGTAGGTTTCAAGTTTTAG
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1362 bp | 453 aa | 136 | 1497 | + | No |
Chemistry : DDE
ORF sequence :
MSIITQKTSNSEKISTSVSDFFHRFHVASALKKSNAVHKRGFSVPVIFSFLLASIFTNGSTYRFYQKQKEQLSFSDKTFRNVLNDPHIHWQKLLILVAKS
VITFLRPLTGDARKTTFIVDDSMYTRSNAKKVECAALQYDHAKKKYFKGFRYLQLGWSDGNSFVPVAFSLLSGKRKLQSDLDIGDQRTNRGKRKAQALRK
GTEVTLELLRSALNQGISADYVLFDTWFSSPKMFQQVRDLKCHCVAMVKRSQKIYYRYQGQKMDVKEIFKRNKKRRGRSRYLLSVQVEAVVEGKILPIKL
VYIRNRNKRNDYLVLASTDIDLTEDEIIQLYARRWSVEVYFKMCKQYLKLAKYQGISYDGIFAHTTLVAIGYMILAVQERESKDDRTLGELFYLLIDELS
ELSVSEAILQLLVLFQEAFADEYVLDEAVLNNIIEQFLEKLPSSIQKQLKQAG
VITFLRPLTGDARKTTFIVDDSMYTRSNAKKVECAALQYDHAKKKYFKGFRYLQLGWSDGNSFVPVAFSLLSGKRKLQSDLDIGDQRTNRGKRKAQALRK
GTEVTLELLRSALNQGISADYVLFDTWFSSPKMFQQVRDLKCHCVAMVKRSQKIYYRYQGQKMDVKEIFKRNKKRRGRSRYLLSVQVEAVVEGKILPIKL
VYIRNRNKRNDYLVLASTDIDLTEDEIIQLYARRWSVEVYFKMCKQYLKLAKYQGISYDGIFAHTTLVAIGYMILAVQERESKDDRTLGELFYLLIDELS
ELSVSEAILQLLVLFQEAFADEYVLDEAVLNNIIEQFLEKLPSSIQKQLKQAG
Blast result :
Comments
ISTeha4 is 61% aa similar to ISLre1.
Additionnal accession number : LC430900.
Additionnal accession number : LC430900.
References
1] Takura Wakinaka (2018) Direct submission.
2] Wakinaka, T., & Watanabe, J. (2019) Appl. Environ. Microbiol 2;85(10)
2] Wakinaka, T., & Watanabe, J. (2019) Appl. Environ. Microbiol 2;85(10)