ISLbp8
- Family ISNCY
- Group ISLbi1
Isoform Synonym(s)
| Accession number | Transposition | Origin | Host |
|---|---|---|---|
| CP000349 | ND | Leptospira borgpetersenii | Leptospira borgpetersenii serovar Hardjo-bovis L550 |
DNA section
IS Length : 1539 bp
Ends
IR Length : 17/21
IRL : CTTATTTCCTCATTTAAAAATATACTTGAAACACTGAACGTTTCCTCAAC
IRR : CTCGACTTTCCTCATGAAAAACGAGTATGAAACATGAGTTGTTTCGTTAT
Insertion site
| Left flank | Direct repeat | Right flank | DR Length |
|---|---|---|---|
| TGGGAAGTTG | GTGCCTGTTGC | 0 |
DNA sequence
CTTATTTCCTCATTTAAAAATATACTTGAAACACTGAACGTTTCCTCAACTAAAAACCTACACGAAACCTAATCAAAAATCAGCACTCTTTTAAGTGAGA
GGCTGTAAACATGAAACTATCTTTAGAGGAACGTAAGGTTATGATTAAGGTATTTCGAGAAAGATACAGATACGCCACTAAGAAAGAAAAGATAAGCATA
CTCAACGAGTTCGTGAGCCTGTCGGGCTTTAACAGAAATTATGCTTCTCAAGTTCTTAGAAAAAAAGAAGTTCTAAAAAAACTTTCGACTAAACCCAAAG
CACAGAATAAAAGAACAGTTTACTATGATGCATCTGTTCGAAAAGTTTTAGAAGATCTCTGGAAACTTTTGGATCACATTTGTAGTAAAAGATTAGTCCA
CGCAATTCCAGAAACAATTAAGAATCTAGAGAGGTTTCAGACCTATAAAATTTCTAAAGAAATAAAACAAAAACTGTTAAAAATCAGTGCTTCCACAATT
GAAAGGCTTTTAGTTCCAATTCAAAAAAAGCTTGGAATCAAAGGAACCTCGATGACGAAACAAAATAAATATCTTATCAATCGAATTCCGATTAAAACTT
TTGGAGAATGGAAAGACTCTCTTCCTGGATTTACACAGATTGATTTAATCGCTCATAACGGCGGGAATGTTTTCGGAGGTTTTTTCTCCACCCTCTGCGC
CACAGATGTTTGTACAGGCTGGACGATTTGTATCCTTGTACGCGATAAAACGATGCTACAGATACTCAAAGCCCTTATACGGCTAAAAAACGTATTTCCT
TATCCTCTCTTAGGGATTCACTCTGACAACGGTTCTGAATTCATTAATGAATCAATCATTCGATTTTCCGAAAAGTATCATCTAATCTTTACACGTGGCC
GTCCTTACAAAAAGAACGATAACCCTCACGTAGAACAAAAAAATTTTTCAGTTGTTCGAAGAAATACTGGTTATCTCAGATTCGATAAATCAGAACACTT
CGAAATTTTAGTAAAACTTTATTCTTTATTAAATCTTTATAATAATTACTTCTTGTCGGTTATGATGTTAAAAGAAAAGCATCGCATTGGTTCAAAATCA
ATGCGAAAATACGATATTCCAAAAACACCGCTCCAGAGAGTTTTAAAGAGAAGTGAAATTCCAAGTGTAAATAAATTAGAAATAAAATCCATTTACAAGA
ATTTCGACCTTTCCTCGATTAAAAATGAAATAAACCAACTACAAGACGATCTAATCAAAATTGCAGCGCCAATTCGATCACCTAATGTGAAAGTAAGAAA
GCGCAGAAAAAAGGCAATCTATCATACAACTCCAAAATGGAGACGAGAGTTTAGCCCTACTTCCTCGAATCCATTTTTACAACGTCAAAAAATGCAAGAA
TTAAGGAGGGCAGCCGAAACGGTTTGGAACAGGCAAAAATAGTATATTCAATCTCAAGAATTTAGGCTATATTTGGAGTAGATTTTTAGATAACGAAACA
ACTCATGTTTCATACTCGTTTTTCATGAGGAAAGTCGAG
GGCTGTAAACATGAAACTATCTTTAGAGGAACGTAAGGTTATGATTAAGGTATTTCGAGAAAGATACAGATACGCCACTAAGAAAGAAAAGATAAGCATA
CTCAACGAGTTCGTGAGCCTGTCGGGCTTTAACAGAAATTATGCTTCTCAAGTTCTTAGAAAAAAAGAAGTTCTAAAAAAACTTTCGACTAAACCCAAAG
CACAGAATAAAAGAACAGTTTACTATGATGCATCTGTTCGAAAAGTTTTAGAAGATCTCTGGAAACTTTTGGATCACATTTGTAGTAAAAGATTAGTCCA
CGCAATTCCAGAAACAATTAAGAATCTAGAGAGGTTTCAGACCTATAAAATTTCTAAAGAAATAAAACAAAAACTGTTAAAAATCAGTGCTTCCACAATT
GAAAGGCTTTTAGTTCCAATTCAAAAAAAGCTTGGAATCAAAGGAACCTCGATGACGAAACAAAATAAATATCTTATCAATCGAATTCCGATTAAAACTT
TTGGAGAATGGAAAGACTCTCTTCCTGGATTTACACAGATTGATTTAATCGCTCATAACGGCGGGAATGTTTTCGGAGGTTTTTTCTCCACCCTCTGCGC
CACAGATGTTTGTACAGGCTGGACGATTTGTATCCTTGTACGCGATAAAACGATGCTACAGATACTCAAAGCCCTTATACGGCTAAAAAACGTATTTCCT
TATCCTCTCTTAGGGATTCACTCTGACAACGGTTCTGAATTCATTAATGAATCAATCATTCGATTTTCCGAAAAGTATCATCTAATCTTTACACGTGGCC
GTCCTTACAAAAAGAACGATAACCCTCACGTAGAACAAAAAAATTTTTCAGTTGTTCGAAGAAATACTGGTTATCTCAGATTCGATAAATCAGAACACTT
CGAAATTTTAGTAAAACTTTATTCTTTATTAAATCTTTATAATAATTACTTCTTGTCGGTTATGATGTTAAAAGAAAAGCATCGCATTGGTTCAAAATCA
ATGCGAAAATACGATATTCCAAAAACACCGCTCCAGAGAGTTTTAAAGAGAAGTGAAATTCCAAGTGTAAATAAATTAGAAATAAAATCCATTTACAAGA
ATTTCGACCTTTCCTCGATTAAAAATGAAATAAACCAACTACAAGACGATCTAATCAAAATTGCAGCGCCAATTCGATCACCTAATGTGAAAGTAAGAAA
GCGCAGAAAAAAGGCAATCTATCATACAACTCCAAAATGGAGACGAGAGTTTAGCCCTACTTCCTCGAATCCATTTTTACAACGTCAAAAAATGCAAGAA
TTAAGGAGGGCAGCCGAAACGGTTTGGAACAGGCAAAAATAGTATATTCAATCTCAAGAATTTAGGCTATATTTGGAGTAGATTTTTAGATAACGAAACA
ACTCATGTTTCATACTCGTTTTTCATGAGGAAAGTCGAG
Protein section
ORF number : 1
ORF 1
| Length | Begin | End | Strand | Fusion ORF | |
|---|---|---|---|---|---|
| 1332 bp | 443 aa | 111 | 1442 | + | No |
Chemistry : Unknow
ORF sequence :
MKLSLEERKVMIKVFRERYRYATKKEKISILNEFVSLSGFNRNYASQVLRKKEVLKKLSTKPKAQNKRTVYYDASVRKVLEDLWKLLDHICSKRLVHAIP
ETIKNLERFQTYKISKEIKQKLLKISASTIERLLVPIQKKLGIKGTSMTKQNKYLINRIPIKTFGEWKDSLPGFTQIDLIAHNGGNVFGGFFSTLCATDV
CTGWTICILVRDKTMLQILKALIRLKNVFPYPLLGIHSDNGSEFINESIIRFSEKYHLIFTRGRPYKKNDNPHVEQKNFSVVRRNTGYLRFDKSEHFEIL
VKLYSLLNLYNNYFLSVMMLKEKHRIGSKSMRKYDIPKTPLQRVLKRSEIPSVNKLEIKSIYKNFDLSSIKNEINQLQDDLIKIAAPIRSPNVKVRKRRK
KAIYHTTPKWRREFSPTSSNPFLQRQKMQELRRAAETVWNRQK
ETIKNLERFQTYKISKEIKQKLLKISASTIERLLVPIQKKLGIKGTSMTKQNKYLINRIPIKTFGEWKDSLPGFTQIDLIAHNGGNVFGGFFSTLCATDV
CTGWTICILVRDKTMLQILKALIRLKNVFPYPLLGIHSDNGSEFINESIIRFSEKYHLIFTRGRPYKKNDNPHVEQKNFSVVRRNTGYLRFDKSEHFEIL
VKLYSLLNLYNNYFLSVMMLKEKHRIGSKSMRKYDIPKTPLQRVLKRSEIPSVNKLEIKSIYKNFDLSSIKNEINQLQDDLIKIAAPIRSPNVKVRKRRK
KAIYHTTPKWRREFSPTSSNPFLQRQKMQELRRAAETVWNRQK
Blast result :
Comments
ISLbp8 is 78% aa similar to ISLbi1.
References
1] ISfinder submission (2018)
2] Bulach,D.M., Zuerner,R.L., Wilson,P., Seemann,T., McGrath,A., Cullen,P.A., Davis,J., Johnson,M., Kuczek,E., Alt,D.P., Peterson-Burch,B., Coppel,R.L., Rood,J.I., Davies,J.K. and Adler,B. (2006)
Proc. Natl. Acad. Sci. U.S.A. 103 (39), 14560-14565 .
2] Bulach,D.M., Zuerner,R.L., Wilson,P., Seemann,T., McGrath,A., Cullen,P.A., Davis,J., Johnson,M., Kuczek,E., Alt,D.P., Peterson-Burch,B., Coppel,R.L., Rood,J.I., Davies,J.K. and Adler,B. (2006)
Proc. Natl. Acad. Sci. U.S.A. 103 (39), 14560-14565 .