ISLbp1
- Family IS4
- Group IS4
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
CP000348 | ND | Leptospira borgpetersenii | Leptospira borgpetersenii serovar Hardjo-bovis L550 |
DNA section
IS Length : 1407 bp
Ends
IR Length : 19
IRL : CAATGCTGTCAATTTAAGAAAAAAGACTAAAGATTAAAGAATTTAGTACG
IRR : CAATGCTGTCAATTTAAGAGACTCTGCCGTAATAGATTTCAAACTTACGT
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
ACCCTAAGGGT | ACCCCTTAGG | 0 | |
ACGAAACGGC | G/ACCCCTTAGGA | AGCGTTTCAA | 11 |
DNA sequence
CAATGCTGTCAATTTAAGAAAAAAGACTAAAGATTAAAGAATTTAGTACGACAAGAAGACATGGGCAAGAAAGAATTACAATCATAGTCGAATTAGAAGC
TTGGATTTATTCCAGAAAGATTCTGGAAATCGCGCGAATGAAACCGAGCGCTTTTACTCGGAATCGTCAACTAACCCTACCGAGGTTGCTGATAGCCATG
ATAAACTTATTAAACAAAAGCTTAGCGGTCGAGTTATATAGATATTTTAAGAATTTAGGAAAGAAAGCTGTAACGAAACAGGCGTTTTCCTTTGCGCGGG
AGAATTTAAATCCGCAAGTGTTTGAATCGTTAAACGAAATATTTGTAAACAGCTACTACAAAAATGTAACGAATTGCAAAACGCATAAAGGTTATATAGT
TGCAGCTTGCGACGCAACAGGAATAAGCCTACCTAAAACGAAGGAGTTCGTGAAAGATTTTGGCTGTGTAAAAAATCAACTGGGGGAATCGGAATCGCCG
AATGCCAATAGTTCGATTATATTTGATATTTATAATGATATAATATTGAGTTCTACCGTTGGTCCGCATAGAACGAGTGAAAGGTCAATGGCGTTGCATC
ATATCGAGAAACTTAGATCGATCTCGGCTCTTCAAAATAAGAAATTGATTCTTCTTTTCGACAGGGGCTATCCATCGATGGAACTAATCGGAAAGTTAAT
GGCAAACGGAATCCATTTTATCGTTAGAAGCAACACCCGTTGGCTCAAAGAGGCAAAAATTGCAGGGGAATACAAAGAATACGACAAAGTTAAAAACATT
CTTATCACTAACAATATGCAAAAGAAGAAGGAATGGCTTAAGGAATATGCGAATACGAAAGGAAATCTGTTTTCATTACGTTTTGTCGGCTCAAGATATA
AAGACGGACAAGTCGGAATTTTTGTCACCGATCTTCCCGATTCCGAATTTTCAAGAGAAGCTATTGTTTCCCTCTACGGCAAACGTTGGAATATAGAAAC
TCATTTTCGTTTCGAAAAATATTCTCTTGAATTGGAGAATGTAGCATCCAAAACTTCAATCCGATTTCTTCAAGAATATTATGCAAAAATCTTAACATTT
AATCTTGCCTCTCTTCTAATCCAAGAAGCGCAAGAAGAATACGATCAATCGATTCAAAACAAAAAAGTAAAAACAAAATATGATTATAAAATTACTAGAA
ATATCGCGATCGGCATTCTAAAAGGAGAACTTCCAAGGTTACTTTCTGGAACTGAACCGATGAACTCCGTTTTTGATGAAATGAAAGCCGTACTTATAAA
ACATCGGCTACCTGTCATTCCAAATAGAACCTTCAATAGAAAACATAAAGTTCGAAAACGTAAGTTTGAAATCTATTACGGCAGAGTCTCTTAAATTGAC
AGCATTG
TTGGATTTATTCCAGAAAGATTCTGGAAATCGCGCGAATGAAACCGAGCGCTTTTACTCGGAATCGTCAACTAACCCTACCGAGGTTGCTGATAGCCATG
ATAAACTTATTAAACAAAAGCTTAGCGGTCGAGTTATATAGATATTTTAAGAATTTAGGAAAGAAAGCTGTAACGAAACAGGCGTTTTCCTTTGCGCGGG
AGAATTTAAATCCGCAAGTGTTTGAATCGTTAAACGAAATATTTGTAAACAGCTACTACAAAAATGTAACGAATTGCAAAACGCATAAAGGTTATATAGT
TGCAGCTTGCGACGCAACAGGAATAAGCCTACCTAAAACGAAGGAGTTCGTGAAAGATTTTGGCTGTGTAAAAAATCAACTGGGGGAATCGGAATCGCCG
AATGCCAATAGTTCGATTATATTTGATATTTATAATGATATAATATTGAGTTCTACCGTTGGTCCGCATAGAACGAGTGAAAGGTCAATGGCGTTGCATC
ATATCGAGAAACTTAGATCGATCTCGGCTCTTCAAAATAAGAAATTGATTCTTCTTTTCGACAGGGGCTATCCATCGATGGAACTAATCGGAAAGTTAAT
GGCAAACGGAATCCATTTTATCGTTAGAAGCAACACCCGTTGGCTCAAAGAGGCAAAAATTGCAGGGGAATACAAAGAATACGACAAAGTTAAAAACATT
CTTATCACTAACAATATGCAAAAGAAGAAGGAATGGCTTAAGGAATATGCGAATACGAAAGGAAATCTGTTTTCATTACGTTTTGTCGGCTCAAGATATA
AAGACGGACAAGTCGGAATTTTTGTCACCGATCTTCCCGATTCCGAATTTTCAAGAGAAGCTATTGTTTCCCTCTACGGCAAACGTTGGAATATAGAAAC
TCATTTTCGTTTCGAAAAATATTCTCTTGAATTGGAGAATGTAGCATCCAAAACTTCAATCCGATTTCTTCAAGAATATTATGCAAAAATCTTAACATTT
AATCTTGCCTCTCTTCTAATCCAAGAAGCGCAAGAAGAATACGATCAATCGATTCAAAACAAAAAAGTAAAAACAAAATATGATTATAAAATTACTAGAA
ATATCGCGATCGGCATTCTAAAAGGAGAACTTCCAAGGTTACTTTCTGGAACTGAACCGATGAACTCCGTTTTTGATGAAATGAAAGCCGTACTTATAAA
ACATCGGCTACCTGTCATTCCAAATAGAACCTTCAATAGAAAACATAAAGTTCGAAAACGTAAGTTTGAAATCTATTACGGCAGAGTCTCTTAAATTGAC
AGCATTG
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1257 bp | 418 aa | 138 | 1394 | + | No |
Chemistry : DDE
ORF sequence :
MKPSAFTRNRQLTLPRLLIAMINLLNKSLAVELYRYFKNLGKKAVTKQAFSFARENLNPQVFESLNEIFVNSYYKNVTNCKTHKGYIVAACDATGISLPK
TKEFVKDFGCVKNQLGESESPNANSSIIFDIYNDIILSSTVGPHRTSERSMALHHIEKLRSISALQNKKLILLFDRGYPSMELIGKLMANGIHFIVRSNT
RWLKEAKIAGEYKEYDKVKNILITNNMQKKKEWLKEYANTKGNLFSLRFVGSRYKDGQVGIFVTDLPDSEFSREAIVSLYGKRWNIETHFRFEKYSLELE
NVASKTSIRFLQEYYAKILTFNLASLLIQEAQEEYDQSIQNKKVKTKYDYKITRNIAIGILKGELPRLLSGTEPMNSVFDEMKAVLIKHRLPVIPNRTFN
RKHKVRKRKFEIYYGRVS
TKEFVKDFGCVKNQLGESESPNANSSIIFDIYNDIILSSTVGPHRTSERSMALHHIEKLRSISALQNKKLILLFDRGYPSMELIGKLMANGIHFIVRSNT
RWLKEAKIAGEYKEYDKVKNILITNNMQKKKEWLKEYANTKGNLFSLRFVGSRYKDGQVGIFVTDLPDSEFSREAIVSLYGKRWNIETHFRFEKYSLELE
NVASKTSIRFLQEYYAKILTFNLASLLIQEAQEEYDQSIQNKKVKTKYDYKITRNIAIGILKGELPRLLSGTEPMNSVFDEMKAVLIKHRLPVIPNRTFN
RKHKVRKRKFEIYYGRVS
Blast result :
Comments
ISLbp1 is 46% aa similar to ISPa45.
References
1] ISfinder submission (2018)
2] Bulach,D.M., Zuerner,R.L., Wilson,P., Seemann,T., McGrath,A., Cullen,P.A., Davis,J., Johnson,M., Kuczek,E., Alt,D.P., Peterson-Burch,B., Coppel,R.L., Rood,J.I., Davies,J.K. and Adler,B. (2006) Proc. Natl. Acad. Sci. U.S.A. 103 (39), 14560-14565.
2] Bulach,D.M., Zuerner,R.L., Wilson,P., Seemann,T., McGrath,A., Cullen,P.A., Davis,J., Johnson,M., Kuczek,E., Alt,D.P., Peterson-Burch,B., Coppel,R.L., Rood,J.I., Davies,J.K. and Adler,B. (2006) Proc. Natl. Acad. Sci. U.S.A. 103 (39), 14560-14565.