ISPa95
- Family IS5
- Group IS5
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
ND | Pseudomonas aeruginosa | Pseudomonas aeruginosa Pseudomonas aeruginosa megaplasmid pVIM200 |
DNA section
IS Length : 1192 bp
Ends
IR Length : 18
IRL : GGAAATCCTGAAAAAGACTTCCTGATTTTGGCAAAATACCCGGACTCCAC
IRR : GGATGGTCTGAAATAGCCCTGTATTTCTGACTGACTTCAGCCTACGCTGA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
TCTGCTAGGTGATGAGTCT | GTAATTGGCAATTCGCAG | 0 |
DNA sequence
GGAAATCCTGAAAAAGACTTCCTGATTTTGGCAAAATACCCGGACTCCACCCGCCGAGTTTTCCGATGAAGCAAATGACCTTCGCCGACGCCGAGTACGC
CGGCAAGCGCAAGCAGACCCGCAAAGAGCTGTTCCTGATCGAGATGGATCAGGTGGTGCCGTGGAAGGGGTTGATTGCCCTGATCGAGCCGCACTACCCG
AAGGGTGAAGGCGGTCGTCCGGCGTATCCGTTGATGGCGATGCTGCGCATACATCTGATGCAGAATTGGTTTGGCTACAGCGATCCGGCGATGGAGGAAG
CGCTGTACGAGACCACCATCCTGCGCCAGTTCGCCGGGTTGAGCCTGGAACGCATTCCTGATGAAACCACCATCCTCAACTTCCGTCGCCTGCTGGAAAA
ACATGAGCTGGCGGCCGGCATCCTCGGTGTGATCAACGGTTACCTGGGTGATCGTGGTCTGTCGCTGCGCCAGGGCACCATCGTCGATGCCACACTGATC
CATGCGCCGAGTTCGACCAAGAACAAGGACGGCAAGCGCGACCCGGAAATGCACCAGACCAAGAAAGGCCAGCAGTTCTACTTCGGCATGAAGGCGCACA
TCGGCGTGGATGACGAGTCGGGCCTGGTGCACAGCGTGGTGGGTACGGCGGCCAACGTTGCGGACGTTACTCAGGTCGACAAGTTGCTGCATGGCGACGA
GAACGTGGTTTGTACGGACGCGGGTTACACCGGCGTTGAGAAACGTCCAGAGCATGTCGATCGTAAGGTTATCTGGCAGGTGGCGGCACGCCGCAGCACC
TACAAGAAACTCGATAAGCGCAGCGCGCTGTACAAGGCCAAGCGCAAGATCGAGAAGGCCAAGGCCCAGGTGCGCGCCAAGGTCGAGCATCCATTTCGCG
TGATCAAGCGGCAGTTTGGCTACACCAAGGTGCGTTTCCGGGGGCTGGTGAAGAACACCGCGCAACTGGTGACGCTGTTCGCCCTGTCGAACCTATGGAT
GGCACGCCGACATTTACTGACGAATGCAGGAGAGGTGCGCTTGTAATGCAGAAAATGGCGCGGCGAGGTGCTCGCTGAGGCCAGAAACACCGAAATAAGC
GGGCGATTTGATCGTTTTTTGATCGGTTTACCGCTTTCAAAATCAGCGTAGGCTGAAGTCAGTCAGAAATACAGGGCTATTTCAGACCATCC
CGGCAAGCGCAAGCAGACCCGCAAAGAGCTGTTCCTGATCGAGATGGATCAGGTGGTGCCGTGGAAGGGGTTGATTGCCCTGATCGAGCCGCACTACCCG
AAGGGTGAAGGCGGTCGTCCGGCGTATCCGTTGATGGCGATGCTGCGCATACATCTGATGCAGAATTGGTTTGGCTACAGCGATCCGGCGATGGAGGAAG
CGCTGTACGAGACCACCATCCTGCGCCAGTTCGCCGGGTTGAGCCTGGAACGCATTCCTGATGAAACCACCATCCTCAACTTCCGTCGCCTGCTGGAAAA
ACATGAGCTGGCGGCCGGCATCCTCGGTGTGATCAACGGTTACCTGGGTGATCGTGGTCTGTCGCTGCGCCAGGGCACCATCGTCGATGCCACACTGATC
CATGCGCCGAGTTCGACCAAGAACAAGGACGGCAAGCGCGACCCGGAAATGCACCAGACCAAGAAAGGCCAGCAGTTCTACTTCGGCATGAAGGCGCACA
TCGGCGTGGATGACGAGTCGGGCCTGGTGCACAGCGTGGTGGGTACGGCGGCCAACGTTGCGGACGTTACTCAGGTCGACAAGTTGCTGCATGGCGACGA
GAACGTGGTTTGTACGGACGCGGGTTACACCGGCGTTGAGAAACGTCCAGAGCATGTCGATCGTAAGGTTATCTGGCAGGTGGCGGCACGCCGCAGCACC
TACAAGAAACTCGATAAGCGCAGCGCGCTGTACAAGGCCAAGCGCAAGATCGAGAAGGCCAAGGCCCAGGTGCGCGCCAAGGTCGAGCATCCATTTCGCG
TGATCAAGCGGCAGTTTGGCTACACCAAGGTGCGTTTCCGGGGGCTGGTGAAGAACACCGCGCAACTGGTGACGCTGTTCGCCCTGTCGAACCTATGGAT
GGCACGCCGACATTTACTGACGAATGCAGGAGAGGTGCGCTTGTAATGCAGAAAATGGCGCGGCGAGGTGCTCGCTGAGGCCAGAAACACCGAAATAAGC
GGGCGATTTGATCGTTTTTTGATCGGTTTACCGCTTTCAAAATCAGCGTAGGCTGAAGTCAGTCAGAAATACAGGGCTATTTCAGACCATCC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
981 bp | 326 aa | 66 | 1046 | + | No |
Chemistry : DDE
ORF sequence :
MKQMTFADAEYAGKRKQTRKELFLIEMDQVVPWKGLIALIEPHYPKGEGGRPAYPLMAMLRIHLMQNWFGYSDPAMEEALYETTILRQFAGLSLERIPDE
TTILNFRRLLEKHELAAGILGVINGYLGDRGLSLRQGTIVDATLIHAPSSTKNKDGKRDPEMHQTKKGQQFYFGMKAHIGVDDESGLVHSVVGTAANVAD
VTQVDKLLHGDENVVCTDAGYTGVEKRPEHVDRKVIWQVAARRSTYKKLDKRSALYKAKRKIEKAKAQVRAKVEHPFRVIKRQFGYTKVRFRGLVKNTAQ
LVTLFALSNLWMARRHLLTNAGEVRL
TTILNFRRLLEKHELAAGILGVINGYLGDRGLSLRQGTIVDATLIHAPSSTKNKDGKRDPEMHQTKKGQQFYFGMKAHIGVDDESGLVHSVVGTAANVAD
VTQVDKLLHGDENVVCTDAGYTGVEKRPEHVDRKVIWQVAARRSTYKKLDKRSALYKAKRKIEKAKAQVRAKVEHPFRVIKRQFGYTKVRFRGLVKNTAQ
LVTLFALSNLWMARRHLLTNAGEVRL
Blast result :
Comments
ISPa95 is 98% aa similar to ISPa16.
References
1] Javier Escobar-Perez (2018) Direct submission.