ISBlma6

  • Family IS4
  • Group IS4
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
NZ_PUHZ01000016 ND Blastopirellula marina
Blastopirellula marina Nap-Phe MGV
DNA section
IS Length : 1567 bp

Ends


IR Length : 23/24

IRL : GAATGGCACGAGCTTAAGACTAAGACCCACGATGCGGTAACGGGCGAAAG
IRR : GAATGGCACGAGCTTAAGTCTAAGCCGTTGTCGTGTAACGATTTCTAGGC

Insertion site


Left flankDirect repeatRight flankDR Length
AAAAAAGTTCATGCCTAGGACAGGGGCTTTTTC0

DNA sequence

GAATGGCACGAGCTTAAGACTAAGACCCACGATGCGGTAACGGGCGAAAGGTGCTGTCGCAAGATCTTGCGACAGCAGGCGATCAGCACTGCAACTTAGC
GAGATGATTTGAAAAAGACGGCGGAGCTTCGCTGAATTGGTGGTGTAACAATCGCCGTTTCAGGAGGCCCCGCCGTGTCCGATCAGTTTAACGCTTCGCC
GCAGGAAGCACAAAGCAAGTTCCGTAACGTTTCGATCTTCGTCAGCGAGTTGCTGTTGCCCAGCGGCGTCGTCGCCGCGATCTGCCAAGAGATCGGCTTC
TCGTTTCGCCAGCGCGTTTACTCGCCGATGGTCGTCGTCTGGATGTTCGTCATGCAGACGCTGTCGGCCGATCATAGTTGTCAGCAAGTCGTGACTCGGC
TTAACGCGTGGCGAATGGCGCAGGGACTGCCGCGATCGAGCGGCGATACCACTTCTTACTGCCAAGCGCGGAGCCGCTTGCCGATTGCGTTGTTCGAACG
ACTGCTCGCATGGACAGCGCGAAAGTGCGACGAAGCTGGCGTCGGCGATTGGCGATTCCAGGGACGCGAAGTGGTCATCGTCGACGGCACGACCGTCACC
ATGGCCGACACGCGGGCGAATCAAGCAGCCTGCCCGCAAATCGCCAACCAGCAGCCTGGCTGCGGCTTTCCCTTGGCGCGGATCGTGCATGTCTTTTCGT
TGGCGACCGGCGCGGCGACGATGTTTGCGATGGGACGTTACGCTGGCAAGGAGACAGGCGAGACGTCGCTGTTGCGAACGCTCTTGTCGCAGTTTCACTC
GGGAGAAATCGTGCTCGCCGACCGTTACTACGCCAGCTTCTGGCTGCTCGCGTTATCGGAGCTGCGCGGGATCGACGTCGTGGCTCGTGCGCATCATCTT
CGCAAAATCGACTTCCGCCGCGGCTTGCGCCAAGGCGACTGCGATCAGGTCGTGGGCTATCGAAAGCCGCAGCGGCCGACGTGGATGACGCAGCGCGAAT
ATGAAAGCCACCCGTCGTCGATTCTCGTGCGTCACTTGCGATATCAAGTCACGCAGCCTGGGTTTCGCACGCGTCAAATCACGTTGGCGACGACGCTACT
GCAGGCCGACATTTATCGAGCGGAGGACCTGGCCGATTTGTATCGTCGCCGTTGGCAAGCGGAACTGCATATCCGGAGTTTGAAAACCCAGATGCAAATG
GATCACCTCCGTTGCAAAAGTCCGGCGATGGTTCACAAGGAACTTCACTGCCATATGATCGGCTACAATCTGGTGCGAGCCGCGATGCTGGCGACGGCGC
TGAAGTTTCGGCTTCCTCCCTGGCGGCCAAGCTTTACCGGCGCAATGCAGGCGATCGAAGAGTTCGCCGCCGCACTCCGCTGGAACCCCAAGCAAGGAGA
GGCTCAGTGGACCAACGTCTTGCAAACGATCCGCCAACTCGAAGTCGGCGCTCGCCCTGACCGGAACGAACCGCGAGAACTCAAACGGCGTGCGAAGGAA
TACAAACTAATGCAAACGCCTAGAAATCGTTACACGACAACGGCTTAGACTTAAGCTCGTGCCATTC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1374 bp457 aa1751548+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MSDQFNASPQEAQSKFRNVSIFVSELLLPSGVVAAICQEIGFSFRQRVYSPMVVVWMFVMQTLSADHSCQQVVTRLNAWRMAQGLPRSSGDTTSYCQARS
RLPIALFERLLAWTARKCDEAGVGDWRFQGREVVIVDGTTVTMADTRANQAACPQIANQQPGCGFPLARIVHVFSLATGAATMFAMGRYAGKETGETSLL
RTLLSQFHSGEIVLADRYYASFWLLALSELRGIDVVARAHHLRKIDFRRGLRQGDCDQVVGYRKPQRPTWMTQREYESHPSSILVRHLRYQVTQPGFRTR
QITLATTLLQADIYRAEDLADLYRRRWQAELHIRSLKTQMQMDHLRCKSPAMVHKELHCHMIGYNLVRAAMLATALKFRLPPWRPSFTGAMQAIEEFAAA
LRWNPKQGEAQWTNVLQTIRQLEVGARPDRNEPRELKRRAKEYKLMQTPRNRYTTTA

 

Blast result :
Comments
ISBlma6 is 60% aa similar to ISArch10.
References
1] ISfinder submission (2018)
2] Araujo,J.E., Taketani,R.G., Silva,M.C.P., Loureco,M.V. and Andreote,F.D. (20185) Direct GenBank submission.