ISBlma6
- Family IS4
- Group IS4
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
NZ_PUHZ01000016 | ND | Blastopirellula marina | Blastopirellula marina Nap-Phe MGV |
DNA section
IS Length : 1567 bp
Ends
IR Length : 23/24
IRL : GAATGGCACGAGCTTAAGACTAAGACCCACGATGCGGTAACGGGCGAAAG
IRR : GAATGGCACGAGCTTAAGTCTAAGCCGTTGTCGTGTAACGATTTCTAGGC
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
AAAAAAGTTCATGCCT | AGGACAGGGGCTTTTTC | 0 |
DNA sequence
GAATGGCACGAGCTTAAGACTAAGACCCACGATGCGGTAACGGGCGAAAGGTGCTGTCGCAAGATCTTGCGACAGCAGGCGATCAGCACTGCAACTTAGC
GAGATGATTTGAAAAAGACGGCGGAGCTTCGCTGAATTGGTGGTGTAACAATCGCCGTTTCAGGAGGCCCCGCCGTGTCCGATCAGTTTAACGCTTCGCC
GCAGGAAGCACAAAGCAAGTTCCGTAACGTTTCGATCTTCGTCAGCGAGTTGCTGTTGCCCAGCGGCGTCGTCGCCGCGATCTGCCAAGAGATCGGCTTC
TCGTTTCGCCAGCGCGTTTACTCGCCGATGGTCGTCGTCTGGATGTTCGTCATGCAGACGCTGTCGGCCGATCATAGTTGTCAGCAAGTCGTGACTCGGC
TTAACGCGTGGCGAATGGCGCAGGGACTGCCGCGATCGAGCGGCGATACCACTTCTTACTGCCAAGCGCGGAGCCGCTTGCCGATTGCGTTGTTCGAACG
ACTGCTCGCATGGACAGCGCGAAAGTGCGACGAAGCTGGCGTCGGCGATTGGCGATTCCAGGGACGCGAAGTGGTCATCGTCGACGGCACGACCGTCACC
ATGGCCGACACGCGGGCGAATCAAGCAGCCTGCCCGCAAATCGCCAACCAGCAGCCTGGCTGCGGCTTTCCCTTGGCGCGGATCGTGCATGTCTTTTCGT
TGGCGACCGGCGCGGCGACGATGTTTGCGATGGGACGTTACGCTGGCAAGGAGACAGGCGAGACGTCGCTGTTGCGAACGCTCTTGTCGCAGTTTCACTC
GGGAGAAATCGTGCTCGCCGACCGTTACTACGCCAGCTTCTGGCTGCTCGCGTTATCGGAGCTGCGCGGGATCGACGTCGTGGCTCGTGCGCATCATCTT
CGCAAAATCGACTTCCGCCGCGGCTTGCGCCAAGGCGACTGCGATCAGGTCGTGGGCTATCGAAAGCCGCAGCGGCCGACGTGGATGACGCAGCGCGAAT
ATGAAAGCCACCCGTCGTCGATTCTCGTGCGTCACTTGCGATATCAAGTCACGCAGCCTGGGTTTCGCACGCGTCAAATCACGTTGGCGACGACGCTACT
GCAGGCCGACATTTATCGAGCGGAGGACCTGGCCGATTTGTATCGTCGCCGTTGGCAAGCGGAACTGCATATCCGGAGTTTGAAAACCCAGATGCAAATG
GATCACCTCCGTTGCAAAAGTCCGGCGATGGTTCACAAGGAACTTCACTGCCATATGATCGGCTACAATCTGGTGCGAGCCGCGATGCTGGCGACGGCGC
TGAAGTTTCGGCTTCCTCCCTGGCGGCCAAGCTTTACCGGCGCAATGCAGGCGATCGAAGAGTTCGCCGCCGCACTCCGCTGGAACCCCAAGCAAGGAGA
GGCTCAGTGGACCAACGTCTTGCAAACGATCCGCCAACTCGAAGTCGGCGCTCGCCCTGACCGGAACGAACCGCGAGAACTCAAACGGCGTGCGAAGGAA
TACAAACTAATGCAAACGCCTAGAAATCGTTACACGACAACGGCTTAGACTTAAGCTCGTGCCATTC
GAGATGATTTGAAAAAGACGGCGGAGCTTCGCTGAATTGGTGGTGTAACAATCGCCGTTTCAGGAGGCCCCGCCGTGTCCGATCAGTTTAACGCTTCGCC
GCAGGAAGCACAAAGCAAGTTCCGTAACGTTTCGATCTTCGTCAGCGAGTTGCTGTTGCCCAGCGGCGTCGTCGCCGCGATCTGCCAAGAGATCGGCTTC
TCGTTTCGCCAGCGCGTTTACTCGCCGATGGTCGTCGTCTGGATGTTCGTCATGCAGACGCTGTCGGCCGATCATAGTTGTCAGCAAGTCGTGACTCGGC
TTAACGCGTGGCGAATGGCGCAGGGACTGCCGCGATCGAGCGGCGATACCACTTCTTACTGCCAAGCGCGGAGCCGCTTGCCGATTGCGTTGTTCGAACG
ACTGCTCGCATGGACAGCGCGAAAGTGCGACGAAGCTGGCGTCGGCGATTGGCGATTCCAGGGACGCGAAGTGGTCATCGTCGACGGCACGACCGTCACC
ATGGCCGACACGCGGGCGAATCAAGCAGCCTGCCCGCAAATCGCCAACCAGCAGCCTGGCTGCGGCTTTCCCTTGGCGCGGATCGTGCATGTCTTTTCGT
TGGCGACCGGCGCGGCGACGATGTTTGCGATGGGACGTTACGCTGGCAAGGAGACAGGCGAGACGTCGCTGTTGCGAACGCTCTTGTCGCAGTTTCACTC
GGGAGAAATCGTGCTCGCCGACCGTTACTACGCCAGCTTCTGGCTGCTCGCGTTATCGGAGCTGCGCGGGATCGACGTCGTGGCTCGTGCGCATCATCTT
CGCAAAATCGACTTCCGCCGCGGCTTGCGCCAAGGCGACTGCGATCAGGTCGTGGGCTATCGAAAGCCGCAGCGGCCGACGTGGATGACGCAGCGCGAAT
ATGAAAGCCACCCGTCGTCGATTCTCGTGCGTCACTTGCGATATCAAGTCACGCAGCCTGGGTTTCGCACGCGTCAAATCACGTTGGCGACGACGCTACT
GCAGGCCGACATTTATCGAGCGGAGGACCTGGCCGATTTGTATCGTCGCCGTTGGCAAGCGGAACTGCATATCCGGAGTTTGAAAACCCAGATGCAAATG
GATCACCTCCGTTGCAAAAGTCCGGCGATGGTTCACAAGGAACTTCACTGCCATATGATCGGCTACAATCTGGTGCGAGCCGCGATGCTGGCGACGGCGC
TGAAGTTTCGGCTTCCTCCCTGGCGGCCAAGCTTTACCGGCGCAATGCAGGCGATCGAAGAGTTCGCCGCCGCACTCCGCTGGAACCCCAAGCAAGGAGA
GGCTCAGTGGACCAACGTCTTGCAAACGATCCGCCAACTCGAAGTCGGCGCTCGCCCTGACCGGAACGAACCGCGAGAACTCAAACGGCGTGCGAAGGAA
TACAAACTAATGCAAACGCCTAGAAATCGTTACACGACAACGGCTTAGACTTAAGCTCGTGCCATTC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1374 bp | 457 aa | 175 | 1548 | + | No |
Chemistry : DDE
ORF sequence :
MSDQFNASPQEAQSKFRNVSIFVSELLLPSGVVAAICQEIGFSFRQRVYSPMVVVWMFVMQTLSADHSCQQVVTRLNAWRMAQGLPRSSGDTTSYCQARS
RLPIALFERLLAWTARKCDEAGVGDWRFQGREVVIVDGTTVTMADTRANQAACPQIANQQPGCGFPLARIVHVFSLATGAATMFAMGRYAGKETGETSLL
RTLLSQFHSGEIVLADRYYASFWLLALSELRGIDVVARAHHLRKIDFRRGLRQGDCDQVVGYRKPQRPTWMTQREYESHPSSILVRHLRYQVTQPGFRTR
QITLATTLLQADIYRAEDLADLYRRRWQAELHIRSLKTQMQMDHLRCKSPAMVHKELHCHMIGYNLVRAAMLATALKFRLPPWRPSFTGAMQAIEEFAAA
LRWNPKQGEAQWTNVLQTIRQLEVGARPDRNEPRELKRRAKEYKLMQTPRNRYTTTA
RLPIALFERLLAWTARKCDEAGVGDWRFQGREVVIVDGTTVTMADTRANQAACPQIANQQPGCGFPLARIVHVFSLATGAATMFAMGRYAGKETGETSLL
RTLLSQFHSGEIVLADRYYASFWLLALSELRGIDVVARAHHLRKIDFRRGLRQGDCDQVVGYRKPQRPTWMTQREYESHPSSILVRHLRYQVTQPGFRTR
QITLATTLLQADIYRAEDLADLYRRRWQAELHIRSLKTQMQMDHLRCKSPAMVHKELHCHMIGYNLVRAAMLATALKFRLPPWRPSFTGAMQAIEEFAAA
LRWNPKQGEAQWTNVLQTIRQLEVGARPDRNEPRELKRRAKEYKLMQTPRNRYTTTA
Blast result :
Comments
ISBlma6 is 60% aa similar to ISArch10.
References
1] ISfinder submission (2018)
2] Araujo,J.E., Taketani,R.G., Silva,M.C.P., Loureco,M.V. and Andreote,F.D. (20185) Direct GenBank submission.
2] Araujo,J.E., Taketani,R.G., Silva,M.C.P., Loureco,M.V. and Andreote,F.D. (20185) Direct GenBank submission.