ISEsa2
- Family IS110
- Group
Isoform Synonym(s) ISCfr15
Accession number | Transposition | Origin | Host |
---|---|---|---|
MF344582 | ND | Enterobacter sakazakii | Enterobacter sakazakii Citrobacter freundii 525011 p525011-HI2 Cronobacter sakazakii 505108 p505108-MDR |
DNA section
IS Length : 1493 bp
Ends
Left end : TATAGTCATTCGTACCCTGAGAATTACACTTTGAAGTGATTCAGGGTATGCGCTTACTGGTTACGAATATTGAGCGAGAATCATGTGATGATCGCCGCTT
Right end : AGAACCTGTTATGACGAAGCGAAATATTTGCTGGCTCTCGAAGCGAGACACTCGCCCTTACTGAAGCCATAAAAAGCTTGTCGAATGTCTCAGGGCGTGA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
AAGAGCGAGA | AGCGGACATT | 0 |
DNA sequence
TATAGTCATTCGTACCCTGAGAATTACACTTTGAAGTGATTCAGGGTATGCGCTTACTGGTTACGAATATTGAGCGAGAATCATGTGATGATCGCCGCTT
TTCTTTCGAGCCAGTAGGTGCTCCACGTTCGCTAACGAATACTCAGGGCATGCAGATAAACTGCTGGCTATATTTCTTTCGAAGAGCGTGGAATGCATAC
CAATCCCCGATAAAAAGGAGTTGGTGATGACTGTGACTAATCAATTTGCTGCGCACGTTGGTCTGGACTGGGCTGATAAAAAACACGATGTCTGTGTTCA
GTTTAAAAACGGTGAACGCGTATTCGATGTGATTGAACATACAGCAGAAGCGCTTGATGCCTGGCTTACTGAGTTACACCAGAAAGTAAAAGGTAGAATC
GCAATAGCTCTCGAACTGAAGAAGGGCCCCGTGGTATATGCTCTTCAAAAATACCCCTTTATCACCGTTTTCCCCGTCCACGCATTGTCCCTGGCTCGTT
ATCGGCAAGCCTTCTCGCCCAGCGGCGCTAAAGATGATCCGCAGGATGCCGAGCTGGCATTAGAGTTAATGCTGCGTTACCCCCAGAAGATAAAAGCTAT
TGAACCCGACAATGCGGATATTCGCTTACTTCAGCAACTGGTTGAGCAACGTCGTCAGTTGGTTGAAGATAAACGACGCTTTGTGAACCGGATAATCAAC
ACGCTTAAACAGTATTATCCTCAGCCACTGGAGTGGTTCTCACATCGGGGTAGCTTACTGTTGTGTGAGCTGATTATCCGGTGGCCCAGTCTGCAACAAC
TGAAACGAGCCAGACGCGACACGATCCGCAACTTTCTGAATGCCAAAGGTGGTCGCGCTATGGCCCTTACCGAGCAACGTGTTGCGAGTATTGATAATGC
GATCCCATTGACTACAGACCCGAGTGTTATAGAGGCTAATGCTTTGATGGCAGCAGCACTGGCGACACAAATTAAAGTCGTGAGTGAAATCATCAAAACC
TATGACGAACGAATCGAAACGCTGTTTGACACATTGCCAGATGCGGGGCTGTTCAAATCACTTCCGGGCATGGGACCGTGCATGGGCCCACGGATGCTTG
CTGCACTTGGTGATAATCGTGACCGGTTTAACAGCGCTGAAGAAATTCAAAACTACGCAGGTATAGCACCGGTGACCGAACGAAGCGGCCAAAAATCATG
GGTTCACTGGCGATGGCAATGTGCCAAGTTCGTCAGGCAGACCTTTGTTGAATGGGCTGCCAAGACGGTTAATTCATCATACTGGGCCAAACTGTATTAT
CAGGGCCTTAGAGAAAAGGGCAAATCTCATCAGTCTGCGATCCGGGCACTGGCGTTCAAATGGATAAGGATCATTTACCGCTGCTGGAAGGCCAGAACCT
GTTATGACGAAGCGAAATATTTGCTGGCTCTCGAAGCGAGACACTCGCCCTTACTGAAGCCATAAAAAGCTTGTCGAATGTCTCAGGGCGTGA
TTCTTTCGAGCCAGTAGGTGCTCCACGTTCGCTAACGAATACTCAGGGCATGCAGATAAACTGCTGGCTATATTTCTTTCGAAGAGCGTGGAATGCATAC
CAATCCCCGATAAAAAGGAGTTGGTGATGACTGTGACTAATCAATTTGCTGCGCACGTTGGTCTGGACTGGGCTGATAAAAAACACGATGTCTGTGTTCA
GTTTAAAAACGGTGAACGCGTATTCGATGTGATTGAACATACAGCAGAAGCGCTTGATGCCTGGCTTACTGAGTTACACCAGAAAGTAAAAGGTAGAATC
GCAATAGCTCTCGAACTGAAGAAGGGCCCCGTGGTATATGCTCTTCAAAAATACCCCTTTATCACCGTTTTCCCCGTCCACGCATTGTCCCTGGCTCGTT
ATCGGCAAGCCTTCTCGCCCAGCGGCGCTAAAGATGATCCGCAGGATGCCGAGCTGGCATTAGAGTTAATGCTGCGTTACCCCCAGAAGATAAAAGCTAT
TGAACCCGACAATGCGGATATTCGCTTACTTCAGCAACTGGTTGAGCAACGTCGTCAGTTGGTTGAAGATAAACGACGCTTTGTGAACCGGATAATCAAC
ACGCTTAAACAGTATTATCCTCAGCCACTGGAGTGGTTCTCACATCGGGGTAGCTTACTGTTGTGTGAGCTGATTATCCGGTGGCCCAGTCTGCAACAAC
TGAAACGAGCCAGACGCGACACGATCCGCAACTTTCTGAATGCCAAAGGTGGTCGCGCTATGGCCCTTACCGAGCAACGTGTTGCGAGTATTGATAATGC
GATCCCATTGACTACAGACCCGAGTGTTATAGAGGCTAATGCTTTGATGGCAGCAGCACTGGCGACACAAATTAAAGTCGTGAGTGAAATCATCAAAACC
TATGACGAACGAATCGAAACGCTGTTTGACACATTGCCAGATGCGGGGCTGTTCAAATCACTTCCGGGCATGGGACCGTGCATGGGCCCACGGATGCTTG
CTGCACTTGGTGATAATCGTGACCGGTTTAACAGCGCTGAAGAAATTCAAAACTACGCAGGTATAGCACCGGTGACCGAACGAAGCGGCCAAAAATCATG
GGTTCACTGGCGATGGCAATGTGCCAAGTTCGTCAGGCAGACCTTTGTTGAATGGGCTGCCAAGACGGTTAATTCATCATACTGGGCCAAACTGTATTAT
CAGGGCCTTAGAGAAAAGGGCAAATCTCATCAGTCTGCGATCCGGGCACTGGCGTTCAAATGGATAAGGATCATTTACCGCTGCTGGAAGGCCAGAACCT
GTTATGACGAAGCGAAATATTTGCTGGCTCTCGAAGCGAGACACTCGCCCTTACTGAAGCCATAAAAAGCTTGTCGAATGTCTCAGGGCGTGA
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1239 bp | 412 aa | 227 | 1465 | + | No |
Chemistry : DEDD
ORF sequence :
MTVTNQFAAHVGLDWADKKHDVCVQFKNGERVFDVIEHTAEALDAWLTELHQKVKGRIAIALELKKGPVVYALQKYPFITVFPVHALSLARYRQAFSPSG
AKDDPQDAELALELMLRYPQKIKAIEPDNADIRLLQQLVEQRRQLVEDKRRFVNRIINTLKQYYPQPLEWFSHRGSLLLCELIIRWPSLQQLKRARRDTI
RNFLNAKGGRAMALTEQRVASIDNAIPLTTDPSVIEANALMAAALATQIKVVSEIIKTYDERIETLFDTLPDAGLFKSLPGMGPCMGPRMLAALGDNRDR
FNSAEEIQNYAGIAPVTERSGQKSWVHWRWQCAKFVRQTFVEWAAKTVNSSYWAKLYYQGLREKGKSHQSAIRALAFKWIRIIYRCWKARTCYDEAKYLL
ALEARHSPLLKP
AKDDPQDAELALELMLRYPQKIKAIEPDNADIRLLQQLVEQRRQLVEDKRRFVNRIINTLKQYYPQPLEWFSHRGSLLLCELIIRWPSLQQLKRARRDTI
RNFLNAKGGRAMALTEQRVASIDNAIPLTTDPSVIEANALMAAALATQIKVVSEIIKTYDERIETLFDTLPDAGLFKSLPGMGPCMGPRMLAALGDNRDR
FNSAEEIQNYAGIAPVTERSGQKSWVHWRWQCAKFVRQTFVEWAAKTVNSSYWAKLYYQGLREKGKSHQSAIRALAFKWIRIIYRCWKARTCYDEAKYLL
ALEARHSPLLKP
Blast result :
Comments
ISEsa2 is 93% aa similar to ISCfr3.
There is an empty site in Cronobacter sakazakii strain MOD1_LR757 (PTOR01000025 ).
There is an empty site in Cronobacter sakazakii strain MOD1_LR757 (PTOR01000025 ).
References
1] Quanhui Liang (2016) Direct submission.
2] Jiang,X., Feng,J., Zeng,L., Zhang,D., Zhan,Z., Zhao,Y., Luo,W. and Zhou,D. (2017) Direct GenBank submission.
2] Jiang,X., Feng,J., Zeng,L., Zhang,D., Zhan,Z., Zhao,Y., Luo,W. and Zhou,D. (2017) Direct GenBank submission.