ISEsa2

  • Family IS110
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s) ISCfr15
Accession numberTranspositionOriginHost
MF344582 ND Enterobacter sakazakii
Enterobacter sakazakii
Citrobacter freundii 525011 p525011-HI2
Cronobacter sakazakii 505108 p505108-MDR
DNA section
IS Length : 1493 bp

Ends


Left end : TATAGTCATTCGTACCCTGAGAATTACACTTTGAAGTGATTCAGGGTATGCGCTTACTGGTTACGAATATTGAGCGAGAATCATGTGATGATCGCCGCTT
Right end : AGAACCTGTTATGACGAAGCGAAATATTTGCTGGCTCTCGAAGCGAGACACTCGCCCTTACTGAAGCCATAAAAAGCTTGTCGAATGTCTCAGGGCGTGA

Insertion site


Left flankDirect repeatRight flankDR Length
AAGAGCGAGAAGCGGACATT0

DNA sequence

TATAGTCATTCGTACCCTGAGAATTACACTTTGAAGTGATTCAGGGTATGCGCTTACTGGTTACGAATATTGAGCGAGAATCATGTGATGATCGCCGCTT
TTCTTTCGAGCCAGTAGGTGCTCCACGTTCGCTAACGAATACTCAGGGCATGCAGATAAACTGCTGGCTATATTTCTTTCGAAGAGCGTGGAATGCATAC
CAATCCCCGATAAAAAGGAGTTGGTGATGACTGTGACTAATCAATTTGCTGCGCACGTTGGTCTGGACTGGGCTGATAAAAAACACGATGTCTGTGTTCA
GTTTAAAAACGGTGAACGCGTATTCGATGTGATTGAACATACAGCAGAAGCGCTTGATGCCTGGCTTACTGAGTTACACCAGAAAGTAAAAGGTAGAATC
GCAATAGCTCTCGAACTGAAGAAGGGCCCCGTGGTATATGCTCTTCAAAAATACCCCTTTATCACCGTTTTCCCCGTCCACGCATTGTCCCTGGCTCGTT
ATCGGCAAGCCTTCTCGCCCAGCGGCGCTAAAGATGATCCGCAGGATGCCGAGCTGGCATTAGAGTTAATGCTGCGTTACCCCCAGAAGATAAAAGCTAT
TGAACCCGACAATGCGGATATTCGCTTACTTCAGCAACTGGTTGAGCAACGTCGTCAGTTGGTTGAAGATAAACGACGCTTTGTGAACCGGATAATCAAC
ACGCTTAAACAGTATTATCCTCAGCCACTGGAGTGGTTCTCACATCGGGGTAGCTTACTGTTGTGTGAGCTGATTATCCGGTGGCCCAGTCTGCAACAAC
TGAAACGAGCCAGACGCGACACGATCCGCAACTTTCTGAATGCCAAAGGTGGTCGCGCTATGGCCCTTACCGAGCAACGTGTTGCGAGTATTGATAATGC
GATCCCATTGACTACAGACCCGAGTGTTATAGAGGCTAATGCTTTGATGGCAGCAGCACTGGCGACACAAATTAAAGTCGTGAGTGAAATCATCAAAACC
TATGACGAACGAATCGAAACGCTGTTTGACACATTGCCAGATGCGGGGCTGTTCAAATCACTTCCGGGCATGGGACCGTGCATGGGCCCACGGATGCTTG
CTGCACTTGGTGATAATCGTGACCGGTTTAACAGCGCTGAAGAAATTCAAAACTACGCAGGTATAGCACCGGTGACCGAACGAAGCGGCCAAAAATCATG
GGTTCACTGGCGATGGCAATGTGCCAAGTTCGTCAGGCAGACCTTTGTTGAATGGGCTGCCAAGACGGTTAATTCATCATACTGGGCCAAACTGTATTAT
CAGGGCCTTAGAGAAAAGGGCAAATCTCATCAGTCTGCGATCCGGGCACTGGCGTTCAAATGGATAAGGATCATTTACCGCTGCTGGAAGGCCAGAACCT
GTTATGACGAAGCGAAATATTTGCTGGCTCTCGAAGCGAGACACTCGCCCTTACTGAAGCCATAAAAAGCTTGTCGAATGTCTCAGGGCGTGA
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1239 bp412 aa2271465+No
ORF function : Transposase
Chemistry : DEDD

ORF sequence :

MTVTNQFAAHVGLDWADKKHDVCVQFKNGERVFDVIEHTAEALDAWLTELHQKVKGRIAIALELKKGPVVYALQKYPFITVFPVHALSLARYRQAFSPSG
AKDDPQDAELALELMLRYPQKIKAIEPDNADIRLLQQLVEQRRQLVEDKRRFVNRIINTLKQYYPQPLEWFSHRGSLLLCELIIRWPSLQQLKRARRDTI
RNFLNAKGGRAMALTEQRVASIDNAIPLTTDPSVIEANALMAAALATQIKVVSEIIKTYDERIETLFDTLPDAGLFKSLPGMGPCMGPRMLAALGDNRDR
FNSAEEIQNYAGIAPVTERSGQKSWVHWRWQCAKFVRQTFVEWAAKTVNSSYWAKLYYQGLREKGKSHQSAIRALAFKWIRIIYRCWKARTCYDEAKYLL
ALEARHSPLLKP

 

Blast result :
Comments
ISEsa2 is 93% aa similar to ISCfr3.
There is an empty site in Cronobacter sakazakii strain MOD1_LR757 (PTOR01000025 ).
References
1] Quanhui Liang (2016) Direct submission.
2] Jiang,X., Feng,J., Zeng,L., Zhang,D., Zhan,Z., Zhao,Y., Luo,W. and Zhou,D. (2017) Direct GenBank submission.