ISDev1
- Family IS21
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
CP026747 | ND | Devosia sp. | Devosia sp. I507 Aquamicrobium sp. |
DNA section
IS Length : 2491 bp
Ends
IR Length : 20/26
IRL : TGTTGAATGTCACTGAGATCTGACCCTCTAGGGGCAGAAGTTTTCACTGA
IRR : TGTTGATTGTCGCCAGGAACTGACCCGGGATTGTCATTGAGAACTGACCC
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
CTCTGTGCTCAGGTCCTCGACAC | TCATGTC | CGTTTGCAGTCGATTGATCGCGC | 7 |
AGATGCTGAATCCAAAGAACATTGTGAAAG | GCCGGTTGTTTATGAACCGCCTGATCGAAC | 0 | |
TGAAAGCATCCGTGCCATCGATG | CCAGGGG | CCCAAATTCCGGGAAACCACTGG | 7 |
GGCAAGCCTAAGCTGCGGGTTGACGCTGAT | AATAGTCGTCAGGCGGGCTCGTACGTGTGG | 0 |
DNA sequence
TGTTGAATGTCACTGAGATCTGACCCTCTAGGGGCAGAAGTTTTCACTGAGAAATGACCCATGTTTTGATCGTCCCCTGGCTGTTGGTCGGGGGATCCAG
GAGTGATCGACATGGCGTTATTGAGCGTAATCCGGCGCTGGCATTTTCGTGAGGGGATGCCGATCCGGGAGATCGAGCGGCGCACGGGCTTGTCGCGCAA
CACCATCCGCAAGTATCTGCGATCCGACACGGTGGAGCCCAGGTTCAAGGTGCCGGCGCGGCCCAGCAAGCTGGACGCGTTTGCCCAGAAGCTTTCCGAT
TGGCTGCGCGTGGAAGCGGGTAAATCGCGCAAGCAGCGGCGCACGGCCAGGCAGATGCACCGCGATCTTGTGGTTCTGGGCTATGAAGGCTCGTATGAGC
GTGTCGCGGCGTTTGTGCGGGCCTGGAAGACCGGGCGGCAGCAGGAGCAGCAAACTAGCGGTCGTGGCACCTTCGTACCCCTGGTGTTCGGTGCGGGCGA
GGCCTTCCAGTTCGACTGGAGCGAAGACTGGGCCATCCTGGGCGGCGAGCGCACCAAGCTGCAGGTGGCTCATACCAAGCTGTCGCACAGCCGGGCCTTC
ATCGTGCGGGCCTATCTGCTTCAGACCCATGAGATGCTGTTCGACGCGATGACCCAGGCGTTCCGGGTTCTTGGGGGCGTGCCCCGTCGCGGCATCTTCG
ACAACATGAAGACCGCCGTCGACCGGATCGGCTCGGGCAAGGCTCGGCAGATCAATGCCCGGTTCGCGGCCATGGCCAGCCATTACCTGTTCGAGCCCGA
GTTCTGCAATCCCGCTTCAGGATGGGAAAAGGGTCAGGTGGAAAAGAACGTGCAGGATGCCCGCCGGCGTCTGTGGCAGCCGCTGCCCAGCTTCCCTGAC
CTCGACAGTCTGAACGCCTGGCTGGAAGAGCAGTGCATCGCGCAATGGAGCCAGATCGTGCATGGCGGCCTTCCGGGCAGCGTCGCCGACGTGCATGCCG
GCGAGGTCTCGAGCCTGATGGCATTGGGGCGACCCTTCGATGGCTTTATCGAACAGACCAAGCGCGTCTCCCCGACGTGCCTGGTTCACTTCGATCGCAA
TCGCTACAGCGTGCCGGCCTCGTTCGCCAACCGGCCGGTCAGTCTGCGGATTTACCCCGAGCGGATCGCCGTCGTGGCCGAGGGGCAGGTCCTGTGCGAG
CATCCGCGCATTATCGAGCGGTCCCATCACCAGCCTGGGCGCACGGTCTATGACTGGCGGCACTATCTGGCGGTGATCCAGCGCAAGCCAGGCGCCCTGC
GCAATGGCGCCCCCTTCGCTGATCTGCCCGAGGCGTTCCGTCGCCTGCAGGGCCACCTGCTCAAGCATCCAGGCGGCGATCGGGAAATGGTCGAGATCCT
GGCGCTGGTGCTGCATCACGACGAGCAAGCGGTGCTCAAAGCCGTAGAGGTCGCGCTCGAGGCCGGCGTTCCCACCAAAACCCATGTGCTCAACCTCCTG
CACCGCCTGGTCGATGGCAAGGCCAGCCAGGTCGAAGCGATCGATGCGCCGCAGGCCCTGGTGCTGCGCCAGGAGCCCAGGGCCAACGTTGCCCGCTATG
ACACGCTGCGCGGCAAGGATGTTCGCCATGCGTCATGACCCTGCCAGTGCCGCCGTTATGGTCATGCTCCGCAGCCTCAAGATGCATGGTATGGCCCAGG
CTGTGGGCGAACTGCTCGAACAGGGTGCACCTGCCTTCGATACCGCCGTGCCGATCCTGTCCCAGTTGCTCAAGGCCGAGCTCGCCGAGCGGGAGGTCCG
GTCCATCGCCTATCAGCTCAAGGCTGCCCGCTTCCCCGCCTTCAAGGATCTGTCCGGCTTCGACTTCGCCTCCAGCGAGATTAATGAGGCCATGGTCCAG
CAGCTTTACCGCGGCGCGTTCATCGAGGGCGCCGACAATGTGGTGCTGATCGGTGGCCCGGGCACTGGCAAAACCCACATCGCTACTGCACTCGGCATCC
AGGCGGTGCAGCATCACCACAAGAAGGTCCGCTTCTTCGCCACCGTCGATCTGGTCAATGCGCTCGAGCAGGAAAAGGCCTTCAACAAGGCCGGCCAGTT
GGCCGAGCGCCTGCTGCGCCTCGATCTGATAATCCTCGACGAACTGGGCTACCTGCCGTTTAGCCCGTCAGGCGGGGCGCTGCTGTTCCATCTGCTCAGC
AAGCTCTACGAGCAGACCAGCGTCGTTATCACCACCAACCTCAGCTTCAGCGAATGGGCCGGTGTGTTCGGCGATGCCAAGATGACCACCGCGCTGCTCG
ATCGGCTCACCCATCACTGCCATATCCTGGAGACCGGCAACGACAGCTTCCGCTTCAGGGCGAGCGCCGCGGCGCCCAAAACACGAAAGGAAAAACCCGC
CACTTGACCGTCCCCGCAGCGCGGGAAACTATCGTCCAACCGGGTCAGTTCTCAATGACAATCCCGGGTCAGTTCCTGGCGACAATCAACA
GAGTGATCGACATGGCGTTATTGAGCGTAATCCGGCGCTGGCATTTTCGTGAGGGGATGCCGATCCGGGAGATCGAGCGGCGCACGGGCTTGTCGCGCAA
CACCATCCGCAAGTATCTGCGATCCGACACGGTGGAGCCCAGGTTCAAGGTGCCGGCGCGGCCCAGCAAGCTGGACGCGTTTGCCCAGAAGCTTTCCGAT
TGGCTGCGCGTGGAAGCGGGTAAATCGCGCAAGCAGCGGCGCACGGCCAGGCAGATGCACCGCGATCTTGTGGTTCTGGGCTATGAAGGCTCGTATGAGC
GTGTCGCGGCGTTTGTGCGGGCCTGGAAGACCGGGCGGCAGCAGGAGCAGCAAACTAGCGGTCGTGGCACCTTCGTACCCCTGGTGTTCGGTGCGGGCGA
GGCCTTCCAGTTCGACTGGAGCGAAGACTGGGCCATCCTGGGCGGCGAGCGCACCAAGCTGCAGGTGGCTCATACCAAGCTGTCGCACAGCCGGGCCTTC
ATCGTGCGGGCCTATCTGCTTCAGACCCATGAGATGCTGTTCGACGCGATGACCCAGGCGTTCCGGGTTCTTGGGGGCGTGCCCCGTCGCGGCATCTTCG
ACAACATGAAGACCGCCGTCGACCGGATCGGCTCGGGCAAGGCTCGGCAGATCAATGCCCGGTTCGCGGCCATGGCCAGCCATTACCTGTTCGAGCCCGA
GTTCTGCAATCCCGCTTCAGGATGGGAAAAGGGTCAGGTGGAAAAGAACGTGCAGGATGCCCGCCGGCGTCTGTGGCAGCCGCTGCCCAGCTTCCCTGAC
CTCGACAGTCTGAACGCCTGGCTGGAAGAGCAGTGCATCGCGCAATGGAGCCAGATCGTGCATGGCGGCCTTCCGGGCAGCGTCGCCGACGTGCATGCCG
GCGAGGTCTCGAGCCTGATGGCATTGGGGCGACCCTTCGATGGCTTTATCGAACAGACCAAGCGCGTCTCCCCGACGTGCCTGGTTCACTTCGATCGCAA
TCGCTACAGCGTGCCGGCCTCGTTCGCCAACCGGCCGGTCAGTCTGCGGATTTACCCCGAGCGGATCGCCGTCGTGGCCGAGGGGCAGGTCCTGTGCGAG
CATCCGCGCATTATCGAGCGGTCCCATCACCAGCCTGGGCGCACGGTCTATGACTGGCGGCACTATCTGGCGGTGATCCAGCGCAAGCCAGGCGCCCTGC
GCAATGGCGCCCCCTTCGCTGATCTGCCCGAGGCGTTCCGTCGCCTGCAGGGCCACCTGCTCAAGCATCCAGGCGGCGATCGGGAAATGGTCGAGATCCT
GGCGCTGGTGCTGCATCACGACGAGCAAGCGGTGCTCAAAGCCGTAGAGGTCGCGCTCGAGGCCGGCGTTCCCACCAAAACCCATGTGCTCAACCTCCTG
CACCGCCTGGTCGATGGCAAGGCCAGCCAGGTCGAAGCGATCGATGCGCCGCAGGCCCTGGTGCTGCGCCAGGAGCCCAGGGCCAACGTTGCCCGCTATG
ACACGCTGCGCGGCAAGGATGTTCGCCATGCGTCATGACCCTGCCAGTGCCGCCGTTATGGTCATGCTCCGCAGCCTCAAGATGCATGGTATGGCCCAGG
CTGTGGGCGAACTGCTCGAACAGGGTGCACCTGCCTTCGATACCGCCGTGCCGATCCTGTCCCAGTTGCTCAAGGCCGAGCTCGCCGAGCGGGAGGTCCG
GTCCATCGCCTATCAGCTCAAGGCTGCCCGCTTCCCCGCCTTCAAGGATCTGTCCGGCTTCGACTTCGCCTCCAGCGAGATTAATGAGGCCATGGTCCAG
CAGCTTTACCGCGGCGCGTTCATCGAGGGCGCCGACAATGTGGTGCTGATCGGTGGCCCGGGCACTGGCAAAACCCACATCGCTACTGCACTCGGCATCC
AGGCGGTGCAGCATCACCACAAGAAGGTCCGCTTCTTCGCCACCGTCGATCTGGTCAATGCGCTCGAGCAGGAAAAGGCCTTCAACAAGGCCGGCCAGTT
GGCCGAGCGCCTGCTGCGCCTCGATCTGATAATCCTCGACGAACTGGGCTACCTGCCGTTTAGCCCGTCAGGCGGGGCGCTGCTGTTCCATCTGCTCAGC
AAGCTCTACGAGCAGACCAGCGTCGTTATCACCACCAACCTCAGCTTCAGCGAATGGGCCGGTGTGTTCGGCGATGCCAAGATGACCACCGCGCTGCTCG
ATCGGCTCACCCATCACTGCCATATCCTGGAGACCGGCAACGACAGCTTCCGCTTCAGGGCGAGCGCCGCGGCGCCCAAAACACGAAAGGAAAAACCCGC
CACTTGACCGTCCCCGCAGCGCGGGAAACTATCGTCCAACCGGGTCAGTTCTCAATGACAATCCCGGGTCAGTTCCTGGCGACAATCAACA
Protein section
ORF number : 2
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1527 bp | 508 aa | 112 | 1638 | + | No |
Chemistry : DDE
ORF sequence :
MALLSVIRRWHFREGMPIREIERRTGLSRNTIRKYLRSDTVEPRFKVPARPSKLDAFAQKLSDWLRVEAGKSRKQRRTARQMHRDLVVLGYEGSYERVAA
FVRAWKTGRQQEQQTSGRGTFVPLVFGAGEAFQFDWSEDWAILGGERTKLQVAHTKLSHSRAFIVRAYLLQTHEMLFDAMTQAFRVLGGVPRRGIFDNMK
TAVDRIGSGKARQINARFAAMASHYLFEPEFCNPASGWEKGQVEKNVQDARRRLWQPLPSFPDLDSLNAWLEEQCIAQWSQIVHGGLPGSVADVHAGEVS
SLMALGRPFDGFIEQTKRVSPTCLVHFDRNRYSVPASFANRPVSLRIYPERIAVVAEGQVLCEHPRIIERSHHQPGRTVYDWRHYLAVIQRKPGALRNGA
PFADLPEAFRRLQGHLLKHPGGDREMVEILALVLHHDEQAVLKAVEVALEAGVPTKTHVLNLLHRLVDGKASQVEAIDAPQALVLRQEPRANVARYDTLR
GKDVRHAS
FVRAWKTGRQQEQQTSGRGTFVPLVFGAGEAFQFDWSEDWAILGGERTKLQVAHTKLSHSRAFIVRAYLLQTHEMLFDAMTQAFRVLGGVPRRGIFDNMK
TAVDRIGSGKARQINARFAAMASHYLFEPEFCNPASGWEKGQVEKNVQDARRRLWQPLPSFPDLDSLNAWLEEQCIAQWSQIVHGGLPGSVADVHAGEVS
SLMALGRPFDGFIEQTKRVSPTCLVHFDRNRYSVPASFANRPVSLRIYPERIAVVAEGQVLCEHPRIIERSHHQPGRTVYDWRHYLAVIQRKPGALRNGA
PFADLPEAFRRLQGHLLKHPGGDREMVEILALVLHHDEQAVLKAVEVALEAGVPTKTHVLNLLHRLVDGKASQVEAIDAPQALVLRQEPRANVARYDTLR
GKDVRHAS
Blast result :ORF 2
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
780 bp | 259 aa | 1628 | 2407 | + | No |
AG : IS21 helper
ORF sequence :
MRHDPASAAVMVMLRSLKMHGMAQAVGELLEQGAPAFDTAVPILSQLLKAELAEREVRSIAYQLKAARFPAFKDLSGFDFASSEINEAMVQQLYRGAFIE
GADNVVLIGGPGTGKTHIATALGIQAVQHHHKKVRFFATVDLVNALEQEKAFNKAGQLAERLLRLDLIILDELGYLPFSPSGGALLFHLLSKLYEQTSVV
ITTNLSFSEWAGVFGDAKMTTALLDRLTHHCHILETGNDSFRFRASAAAPKTRKEKPAT
GADNVVLIGGPGTGKTHIATALGIQAVQHHHKKVRFFATVDLVNALEQEKAFNKAGQLAERLLRLDLIILDELGYLPFSPSGGALLFHLLSKLYEQTSVV
ITTNLSFSEWAGVFGDAKMTTALLDRLTHHCHILETGNDSFRFRASAAAPKTRKEKPAT
Blast result :
Comments
ISDev1 is 90% aa similar to ISRsp3.
References
1] Hong (2018) Direct submission.
2] ISfinder annotation (2018).
2] ISfinder annotation (2018).