ISSpn14

  • Family ISL3
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
FM211187 ND Streptococcus pneumoniae
Streptococcus pneumoniae ATCC 700669
DNA section
IS Length : 1415 bp

Ends


IR Length : 16/24

IRL : GGCTCTATAATATTTGTAGTGGGTAAATCCACTATAGATATTATGGAGCC
IRR : GACTCTTTGTCAACTGTAGTGGGTTGAAAAAAAGCTAAGCTCGAGAAAGG

Insertion site


Left flankDirect repeatRight flankDR Length
CTAAACTGCACAAAAAAGAGAGACTCCA8

DNA sequence

GGCTCTATAATATTTGTAGTGGGTAAATCCACTATAGATATTATGGAGCCTATTTTATTGTAGAAAAAAAGTCCCATAAGATCTATAATGAAAAGCGACC
AAACAACTCATTAGAAAGATTCATATGGAACAATTACATTTTATCACAAAACTACTCGATATCAAAGACACAAATATCCAAATTATAGATGTCGTCAATA
GGGATACACACAAGGAAATCATCGCCAAACTGGACTACGACGCCCCATCTTGCCCTGAGTGCGGAAACCAATTGAAGAAATATGACTTTCAAAAACCTTC
TAAAATTCCTTATCTTGAAACGACTGGTATGCCTACTAGAATTCTCCTTAGAAAGCGTCGATTCAAGTGCTATCACTGTTCAAAAATGATGGTCGCTGAA
ACTTCTATCGTCAAGAAGAATCACCAAATCCCTCGTATCATCAACCAAAAAATTGCTCAAAAGTTAATTGAAAAAATTTCTATGACTGATATTGCCCATC
AGCTTTCCATCTCAACTTCAACTGTTATTCGTAAGCTCAATGATTTTCACTTTAAACATGATTTTTCTTGTCTTCCTGAGATTATGTCTTGGGATGAGTA
TGCTTTTACAAAGGGAAAGATGAGCTTCATTGCGCAAGATTTTAACAATCTCAATATCATCACTGTTCTTGAGGGAAGAACACAAGCTATCATTCGAAAT
CACTTTCTTAAATATGATAGAGCCGTCCGATGTCGCGTCAAAATTATTACTATGGATATGTTTAGTCCTTACTATGACTTAGCTAGACAACTTTTCCCAT
GTGCTAAAATCGTGTTGGATCGCTTTCACATTGTACAACATCTTAGCCGTGCTATGAGTCGTGTGCGTGTTCAAATCATGAATCAATTGGATCGAAAGTC
TCATGAATACAAGGCTATCAAGCGCTACTGGAAGCTCATACAACAGGATAGTCGTAAACTCAGCGATAAACATTTTTATCGTCCTACTTTTCGTATGCAC
TTAACCAATAAAGAGATTTTAAACAAGCTTTTGAGCTATTCACAAGACTTGAAACATCACTATCAGCTCTATCAACTCTTGCTGTTTCACTTTCAGAATA
AGGAACCGGAGAAATTTTTCGGACTCATTGAGGACAATCTAAAGCAGGTTCATCCTCTTTTTCAGACTGTCTTTAAAACCTTTCTAAAGGACAAAGAGAA
AATCGTCAACGCCCTTCAACTACACTATTCTAACGCCAAATTGGAAGCGACCAATAATCTCATCAAACTTATCAAGCGCAATGCCTTTGGTTTTCGGAAC
TTTGAAAACTTCAAAAAACGGATTTTTATCGCCCTGAATATCAAAAAAGAAAGGACGAAATTTGTCCTTTCTCGAGCTTAGCTTTTTTTCAACCCACTAC
AGTTGACAAAGAGTC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1257 bp418 aa1251381+No
ORF function : Transposase
Chemistry : Unknow

ORF sequence :

MEQLHFITKLLDIKDTNIQIIDVVNRDTHKEIIAKLDYDAPSCPECGNQLKKYDFQKPSKIPYLETTGMPTRILLRKRRFKCYHCSKMMVAETSIVKKNH
QIPRIINQKIAQKLIEKISMTDIAHQLSISTSTVIRKLNDFHFKHDFSCLPEIMSWDEYAFTKGKMSFIAQDFNNLNIITVLEGRTQAIIRNHFLKYDRA
VRCRVKIITMDMFSPYYDLARQLFPCAKIVLDRFHIVQHLSRAMSRVRVQIMNQLDRKSHEYKAIKRYWKLIQQDSRKLSDKHFYRPTFRMHLTNKEILN
KLLSYSQDLKHHYQLYQLLLFHFQNKEPEKFFGLIEDNLKQVHPLFQTVFKTFLKDKEKIVNALQLHYSNAKLEATNNLIKLIKRNAFGFRNFENFKKRI
FIALNIKKERTKFVLSRA

 

Blast result :
Comments
ISSpn14 is 96% aa similar to IS1167.
References