ISSpn14
- Family ISL3
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
FM211187 | ND | Streptococcus pneumoniae | Streptococcus pneumoniae ATCC 700669 |
DNA section
IS Length : 1415 bp
Ends
IR Length : 16/24
IRL : GGCTCTATAATATTTGTAGTGGGTAAATCCACTATAGATATTATGGAGCC
IRR : GACTCTTTGTCAACTGTAGTGGGTTGAAAAAAAGCTAAGCTCGAGAAAGG
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
CTAAACTGCA | CAAAAAAG | AGAGACTCCA | 8 |
DNA sequence
GGCTCTATAATATTTGTAGTGGGTAAATCCACTATAGATATTATGGAGCCTATTTTATTGTAGAAAAAAAGTCCCATAAGATCTATAATGAAAAGCGACC
AAACAACTCATTAGAAAGATTCATATGGAACAATTACATTTTATCACAAAACTACTCGATATCAAAGACACAAATATCCAAATTATAGATGTCGTCAATA
GGGATACACACAAGGAAATCATCGCCAAACTGGACTACGACGCCCCATCTTGCCCTGAGTGCGGAAACCAATTGAAGAAATATGACTTTCAAAAACCTTC
TAAAATTCCTTATCTTGAAACGACTGGTATGCCTACTAGAATTCTCCTTAGAAAGCGTCGATTCAAGTGCTATCACTGTTCAAAAATGATGGTCGCTGAA
ACTTCTATCGTCAAGAAGAATCACCAAATCCCTCGTATCATCAACCAAAAAATTGCTCAAAAGTTAATTGAAAAAATTTCTATGACTGATATTGCCCATC
AGCTTTCCATCTCAACTTCAACTGTTATTCGTAAGCTCAATGATTTTCACTTTAAACATGATTTTTCTTGTCTTCCTGAGATTATGTCTTGGGATGAGTA
TGCTTTTACAAAGGGAAAGATGAGCTTCATTGCGCAAGATTTTAACAATCTCAATATCATCACTGTTCTTGAGGGAAGAACACAAGCTATCATTCGAAAT
CACTTTCTTAAATATGATAGAGCCGTCCGATGTCGCGTCAAAATTATTACTATGGATATGTTTAGTCCTTACTATGACTTAGCTAGACAACTTTTCCCAT
GTGCTAAAATCGTGTTGGATCGCTTTCACATTGTACAACATCTTAGCCGTGCTATGAGTCGTGTGCGTGTTCAAATCATGAATCAATTGGATCGAAAGTC
TCATGAATACAAGGCTATCAAGCGCTACTGGAAGCTCATACAACAGGATAGTCGTAAACTCAGCGATAAACATTTTTATCGTCCTACTTTTCGTATGCAC
TTAACCAATAAAGAGATTTTAAACAAGCTTTTGAGCTATTCACAAGACTTGAAACATCACTATCAGCTCTATCAACTCTTGCTGTTTCACTTTCAGAATA
AGGAACCGGAGAAATTTTTCGGACTCATTGAGGACAATCTAAAGCAGGTTCATCCTCTTTTTCAGACTGTCTTTAAAACCTTTCTAAAGGACAAAGAGAA
AATCGTCAACGCCCTTCAACTACACTATTCTAACGCCAAATTGGAAGCGACCAATAATCTCATCAAACTTATCAAGCGCAATGCCTTTGGTTTTCGGAAC
TTTGAAAACTTCAAAAAACGGATTTTTATCGCCCTGAATATCAAAAAAGAAAGGACGAAATTTGTCCTTTCTCGAGCTTAGCTTTTTTTCAACCCACTAC
AGTTGACAAAGAGTC
AAACAACTCATTAGAAAGATTCATATGGAACAATTACATTTTATCACAAAACTACTCGATATCAAAGACACAAATATCCAAATTATAGATGTCGTCAATA
GGGATACACACAAGGAAATCATCGCCAAACTGGACTACGACGCCCCATCTTGCCCTGAGTGCGGAAACCAATTGAAGAAATATGACTTTCAAAAACCTTC
TAAAATTCCTTATCTTGAAACGACTGGTATGCCTACTAGAATTCTCCTTAGAAAGCGTCGATTCAAGTGCTATCACTGTTCAAAAATGATGGTCGCTGAA
ACTTCTATCGTCAAGAAGAATCACCAAATCCCTCGTATCATCAACCAAAAAATTGCTCAAAAGTTAATTGAAAAAATTTCTATGACTGATATTGCCCATC
AGCTTTCCATCTCAACTTCAACTGTTATTCGTAAGCTCAATGATTTTCACTTTAAACATGATTTTTCTTGTCTTCCTGAGATTATGTCTTGGGATGAGTA
TGCTTTTACAAAGGGAAAGATGAGCTTCATTGCGCAAGATTTTAACAATCTCAATATCATCACTGTTCTTGAGGGAAGAACACAAGCTATCATTCGAAAT
CACTTTCTTAAATATGATAGAGCCGTCCGATGTCGCGTCAAAATTATTACTATGGATATGTTTAGTCCTTACTATGACTTAGCTAGACAACTTTTCCCAT
GTGCTAAAATCGTGTTGGATCGCTTTCACATTGTACAACATCTTAGCCGTGCTATGAGTCGTGTGCGTGTTCAAATCATGAATCAATTGGATCGAAAGTC
TCATGAATACAAGGCTATCAAGCGCTACTGGAAGCTCATACAACAGGATAGTCGTAAACTCAGCGATAAACATTTTTATCGTCCTACTTTTCGTATGCAC
TTAACCAATAAAGAGATTTTAAACAAGCTTTTGAGCTATTCACAAGACTTGAAACATCACTATCAGCTCTATCAACTCTTGCTGTTTCACTTTCAGAATA
AGGAACCGGAGAAATTTTTCGGACTCATTGAGGACAATCTAAAGCAGGTTCATCCTCTTTTTCAGACTGTCTTTAAAACCTTTCTAAAGGACAAAGAGAA
AATCGTCAACGCCCTTCAACTACACTATTCTAACGCCAAATTGGAAGCGACCAATAATCTCATCAAACTTATCAAGCGCAATGCCTTTGGTTTTCGGAAC
TTTGAAAACTTCAAAAAACGGATTTTTATCGCCCTGAATATCAAAAAAGAAAGGACGAAATTTGTCCTTTCTCGAGCTTAGCTTTTTTTCAACCCACTAC
AGTTGACAAAGAGTC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1257 bp | 418 aa | 125 | 1381 | + | No |
Chemistry : Unknow
ORF sequence :
MEQLHFITKLLDIKDTNIQIIDVVNRDTHKEIIAKLDYDAPSCPECGNQLKKYDFQKPSKIPYLETTGMPTRILLRKRRFKCYHCSKMMVAETSIVKKNH
QIPRIINQKIAQKLIEKISMTDIAHQLSISTSTVIRKLNDFHFKHDFSCLPEIMSWDEYAFTKGKMSFIAQDFNNLNIITVLEGRTQAIIRNHFLKYDRA
VRCRVKIITMDMFSPYYDLARQLFPCAKIVLDRFHIVQHLSRAMSRVRVQIMNQLDRKSHEYKAIKRYWKLIQQDSRKLSDKHFYRPTFRMHLTNKEILN
KLLSYSQDLKHHYQLYQLLLFHFQNKEPEKFFGLIEDNLKQVHPLFQTVFKTFLKDKEKIVNALQLHYSNAKLEATNNLIKLIKRNAFGFRNFENFKKRI
FIALNIKKERTKFVLSRA
QIPRIINQKIAQKLIEKISMTDIAHQLSISTSTVIRKLNDFHFKHDFSCLPEIMSWDEYAFTKGKMSFIAQDFNNLNIITVLEGRTQAIIRNHFLKYDRA
VRCRVKIITMDMFSPYYDLARQLFPCAKIVLDRFHIVQHLSRAMSRVRVQIMNQLDRKSHEYKAIKRYWKLIQQDSRKLSDKHFYRPTFRMHLTNKEILN
KLLSYSQDLKHHYQLYQLLLFHFQNKEPEKFFGLIEDNLKQVHPLFQTVFKTFLKDKEKIVNALQLHYSNAKLEATNNLIKLIKRNAFGFRNFENFKKRI
FIALNIKKERTKFVLSRA
Blast result :
Comments
ISSpn14 is 96% aa similar to IS1167.
References