ISSth8
- Family ISL3
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
ABJ66574.1 | ND | Streptococcus thermophilus | Streptococcus thermophilus LMD-9 Streptococcus thermophilus SMQ-301 |
DNA section
IS Length : 1339 bp
Ends
IR Length : 19/26
IRL : GGCTCTATAATTTCTGTAGTGGGTAAAACCACTGTAGAGATTATAGAGCT
IRR : GGCTCTTTGTCAACTGTAGTGGGTGACGAAAAGCTAACATCTAGAGAGGA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
ATAGCTCTTTTACTATTTA | ATTATTATTTAACGTGTT | 0 |
DNA sequence
GGCTCTATAATTTCTGTAGTGGGTAAAACCACTGTAGAGATTATAGAGCTTTTTGAATGCAGACAAAAAGTCCCATAAGAACTATAATGAAAAGCAACCA
AACCATCATTAGGAAGAACTTATGAGACTTATTAAGAATAACACAGAATTAATCGGAATCAAAGACCAAAATATCAAGATTTCACTTGTTTTTGAAACTG
ACACTCATATCGAGATTCAAGCAAAACTTGATTACCCTGCACCATCATGTCCTCACTGCCAAGGAAAGATGATCAAGTACGACTTTCAAAAGCCTTCTAA
AATCCCTCTTCTCGAGCAAGTGGGAACGCCAACTCTACTACGTCTGAAAAAACATCATTTCCAGTGTAAAAGTTGTAGAAGTGTCACGGTAGCTGAGACA
TCTATCGTTGAGAAAAACCACCAAATCTCCAATCTAGTCCGACAAAAAGTTACACAACTCCTAACTGAGAAAGTGTCACTAACTGATATTGCAAGAAGAC
TTCGCGTGTCGACGTCCACTGTCTATCGTAAGCTTGATCAGTTTACTTTCAAGAAACATTATGACAAACTCCCTAACGAACTCATAATCATCCTTGATAA
TCGCCACCAAACTACTATACGAAACTACTTTTTGAAGTATCCATTGAAAGTCCGACAACAGGTACAGTTTATCACGATGGATATGTCTGGAGCTTATATT
CCACTGGCTCACAAGCTCTTTCCAAACGCAAAAATCGTTCTTGATCGTTTCCACATCATCCAGCACCTTGGACGTGCCTTTTTAAAGACAAGAATTGCAA
TTATGAACCAATTCGATAAGAAGTCACTACCCTATCGAGCCCTGAAAAATCACTGGCGACTCTTCCAAAAGGACAGATGTAAGTTATCTCTCAACTCTTT
CTATTCAAAGACTTTCCGTCAAACTTTAGCACCACATGAAGTCATTGCGAAGACACTAGTCTTTTCAAAAGAGCTTACTGACTACTATACACTTTATCAA
CTTTTGCTTTTTCACTTTCAGGAGAAGAGAGTAGGTGAGTTCTTTGACCTGATAGAGGAAAATAGAAGCAAGGTCAATCACTATTTTCAAACGGTCTTTA
GGATTTTTCTTAGACACAAGCAATACATCCAAAATGCACTAGAAACAGACTATTCAAACGCAAAACTGGAAGCTACTAACAAGTTGAACAAAGACATCAA
ACGCTTGGACTTCGGTTTTAGAAACTTTATCAACTTTAAGAAGCGTGTCTTCATCACACTGAACATACATAAAAAAAGGACCTACCCGGTCCTCTCTAGA
TGTTAGCTTTTCGTCACCCACTACAGTTGACAAAGAGCC
AACCATCATTAGGAAGAACTTATGAGACTTATTAAGAATAACACAGAATTAATCGGAATCAAAGACCAAAATATCAAGATTTCACTTGTTTTTGAAACTG
ACACTCATATCGAGATTCAAGCAAAACTTGATTACCCTGCACCATCATGTCCTCACTGCCAAGGAAAGATGATCAAGTACGACTTTCAAAAGCCTTCTAA
AATCCCTCTTCTCGAGCAAGTGGGAACGCCAACTCTACTACGTCTGAAAAAACATCATTTCCAGTGTAAAAGTTGTAGAAGTGTCACGGTAGCTGAGACA
TCTATCGTTGAGAAAAACCACCAAATCTCCAATCTAGTCCGACAAAAAGTTACACAACTCCTAACTGAGAAAGTGTCACTAACTGATATTGCAAGAAGAC
TTCGCGTGTCGACGTCCACTGTCTATCGTAAGCTTGATCAGTTTACTTTCAAGAAACATTATGACAAACTCCCTAACGAACTCATAATCATCCTTGATAA
TCGCCACCAAACTACTATACGAAACTACTTTTTGAAGTATCCATTGAAAGTCCGACAACAGGTACAGTTTATCACGATGGATATGTCTGGAGCTTATATT
CCACTGGCTCACAAGCTCTTTCCAAACGCAAAAATCGTTCTTGATCGTTTCCACATCATCCAGCACCTTGGACGTGCCTTTTTAAAGACAAGAATTGCAA
TTATGAACCAATTCGATAAGAAGTCACTACCCTATCGAGCCCTGAAAAATCACTGGCGACTCTTCCAAAAGGACAGATGTAAGTTATCTCTCAACTCTTT
CTATTCAAAGACTTTCCGTCAAACTTTAGCACCACATGAAGTCATTGCGAAGACACTAGTCTTTTCAAAAGAGCTTACTGACTACTATACACTTTATCAA
CTTTTGCTTTTTCACTTTCAGGAGAAGAGAGTAGGTGAGTTCTTTGACCTGATAGAGGAAAATAGAAGCAAGGTCAATCACTATTTTCAAACGGTCTTTA
GGATTTTTCTTAGACACAAGCAATACATCCAAAATGCACTAGAAACAGACTATTCAAACGCAAAACTGGAAGCTACTAACAAGTTGAACAAAGACATCAA
ACGCTTGGACTTCGGTTTTAGAAACTTTATCAACTTTAAGAAGCGTGTCTTCATCACACTGAACATACATAAAAAAAGGACCTACCCGGTCCTCTCTAGA
TGTTAGCTTTTCGTCACCCACTACAGTTGACAAAGAGCC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1185 bp | 394 aa | 122 | 1306 | + | No |
Chemistry : Unknow
ORF sequence :
MRLIKNNTELIGIKDQNIKISLVFETDTHIEIQAKLDYPAPSCPHCQGKMIKYDFQKPSKIPLLEQVGTPTLLRLKKHHFQCKSCRSVTVAETSIVEKNH
QISNLVRQKVTQLLTEKVSLTDIARRLRVSTSTVYRKLDQFTFKKHYDKLPNELIIILDNRHQTTIRNYFLKYPLKVRQQVQFITMDMSGAYIPLAHKLF
PNAKIVLDRFHIIQHLGRAFLKTRIAIMNQFDKKSLPYRALKNHWRLFQKDRCKLSLNSFYSKTFRQTLAPHEVIAKTLVFSKELTDYYTLYQLLLFHFQ
EKRVGEFFDLIEENRSKVNHYFQTVFRIFLRHKQYIQNALETDYSNAKLEATNKLNKDIKRLDFGFRNFINFKKRVFITLNIHKKRTYPVLSRC
QISNLVRQKVTQLLTEKVSLTDIARRLRVSTSTVYRKLDQFTFKKHYDKLPNELIIILDNRHQTTIRNYFLKYPLKVRQQVQFITMDMSGAYIPLAHKLF
PNAKIVLDRFHIIQHLGRAFLKTRIAIMNQFDKKSLPYRALKNHWRLFQKDRCKLSLNSFYSKTFRQTLAPHEVIAKTLVFSKELTDYYTLYQLLLFHFQ
EKRVGEFFDLIEENRSKVNHYFQTVFRIFLRHKQYIQNALETDYSNAKLEATNKLNKDIKRLDFGFRNFINFKKRVFITLNIHKKRTYPVLSRC
Blast result :
Comments
ISSth8 is 87% aa similar to ISSmu2.
References