ISSth8

  • Family ISL3
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
ABJ66574.1 ND Streptococcus thermophilus
Streptococcus thermophilus LMD-9
Streptococcus thermophilus SMQ-301
DNA section
IS Length : 1339 bp

Ends


IR Length : 19/26

IRL : GGCTCTATAATTTCTGTAGTGGGTAAAACCACTGTAGAGATTATAGAGCT
IRR : GGCTCTTTGTCAACTGTAGTGGGTGACGAAAAGCTAACATCTAGAGAGGA

Insertion site


Left flankDirect repeatRight flankDR Length
ATAGCTCTTTTACTATTTAATTATTATTTAACGTGTT0

DNA sequence

GGCTCTATAATTTCTGTAGTGGGTAAAACCACTGTAGAGATTATAGAGCTTTTTGAATGCAGACAAAAAGTCCCATAAGAACTATAATGAAAAGCAACCA
AACCATCATTAGGAAGAACTTATGAGACTTATTAAGAATAACACAGAATTAATCGGAATCAAAGACCAAAATATCAAGATTTCACTTGTTTTTGAAACTG
ACACTCATATCGAGATTCAAGCAAAACTTGATTACCCTGCACCATCATGTCCTCACTGCCAAGGAAAGATGATCAAGTACGACTTTCAAAAGCCTTCTAA
AATCCCTCTTCTCGAGCAAGTGGGAACGCCAACTCTACTACGTCTGAAAAAACATCATTTCCAGTGTAAAAGTTGTAGAAGTGTCACGGTAGCTGAGACA
TCTATCGTTGAGAAAAACCACCAAATCTCCAATCTAGTCCGACAAAAAGTTACACAACTCCTAACTGAGAAAGTGTCACTAACTGATATTGCAAGAAGAC
TTCGCGTGTCGACGTCCACTGTCTATCGTAAGCTTGATCAGTTTACTTTCAAGAAACATTATGACAAACTCCCTAACGAACTCATAATCATCCTTGATAA
TCGCCACCAAACTACTATACGAAACTACTTTTTGAAGTATCCATTGAAAGTCCGACAACAGGTACAGTTTATCACGATGGATATGTCTGGAGCTTATATT
CCACTGGCTCACAAGCTCTTTCCAAACGCAAAAATCGTTCTTGATCGTTTCCACATCATCCAGCACCTTGGACGTGCCTTTTTAAAGACAAGAATTGCAA
TTATGAACCAATTCGATAAGAAGTCACTACCCTATCGAGCCCTGAAAAATCACTGGCGACTCTTCCAAAAGGACAGATGTAAGTTATCTCTCAACTCTTT
CTATTCAAAGACTTTCCGTCAAACTTTAGCACCACATGAAGTCATTGCGAAGACACTAGTCTTTTCAAAAGAGCTTACTGACTACTATACACTTTATCAA
CTTTTGCTTTTTCACTTTCAGGAGAAGAGAGTAGGTGAGTTCTTTGACCTGATAGAGGAAAATAGAAGCAAGGTCAATCACTATTTTCAAACGGTCTTTA
GGATTTTTCTTAGACACAAGCAATACATCCAAAATGCACTAGAAACAGACTATTCAAACGCAAAACTGGAAGCTACTAACAAGTTGAACAAAGACATCAA
ACGCTTGGACTTCGGTTTTAGAAACTTTATCAACTTTAAGAAGCGTGTCTTCATCACACTGAACATACATAAAAAAAGGACCTACCCGGTCCTCTCTAGA
TGTTAGCTTTTCGTCACCCACTACAGTTGACAAAGAGCC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1185 bp394 aa1221306+No
ORF function : Transposase
Chemistry : Unknow

ORF sequence :

MRLIKNNTELIGIKDQNIKISLVFETDTHIEIQAKLDYPAPSCPHCQGKMIKYDFQKPSKIPLLEQVGTPTLLRLKKHHFQCKSCRSVTVAETSIVEKNH
QISNLVRQKVTQLLTEKVSLTDIARRLRVSTSTVYRKLDQFTFKKHYDKLPNELIIILDNRHQTTIRNYFLKYPLKVRQQVQFITMDMSGAYIPLAHKLF
PNAKIVLDRFHIIQHLGRAFLKTRIAIMNQFDKKSLPYRALKNHWRLFQKDRCKLSLNSFYSKTFRQTLAPHEVIAKTLVFSKELTDYYTLYQLLLFHFQ
EKRVGEFFDLIEENRSKVNHYFQTVFRIFLRHKQYIQNALETDYSNAKLEATNKLNKDIKRLDFGFRNFINFKKRVFITLNIHKKRTYPVLSRC

 

Blast result :
Comments
ISSth8 is 87% aa similar to ISSmu2.
References