ISBth1
- Family IS3
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
L29100 | ND | Bacillus thuringiensis | Bacillus thuringiensis |
DNA section
IS Length : 999 bp
Ends
IR Length : 15/17
IRL : TGAAAAAATATAAAGAATTTAGTGGAATTACAGATACTTGTGGGAAAAAT
IRR : TGAAAAAATACAAAAAACGTAACAAATTTTATAAAATATCAATATATGCC
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|
DNA sequence
TGAAAAAATATAAAGAATTTAGTGGAATTACAGATACTTGTGGGAAAAATGGTGGAATGAAAGGTGTATCAAATTGGTTAAAAGAGAAATATCCAGTTAT
ATGGTTTACGAAATTTGCGGGTGTACATCGTTGAAGTATTCATACCAAAGGTATGAAAAATATACGGCTAGAACTCGAAAAATGATTAAAAAAGTAAGAT
CTATTCACGTAAAGCACAAAGAATTTGGTTATCCACATATGAAAATCCCTTTACAGGAAGAGGGATATTTTATAAATCACAAGAAAGTATATCGCTTAAA
GATGGGGCTAAACATCCAATCTATTATTCGAAAGAAGCGTTGCTTCTTTAAAGGGAACTATTCCAAATTTTTTCTGAATGTTTTAAATCGTGAGTTTAAA
GATCGCCAACAAAATGAGGCACTTGTTACAGATATTACTTACCTACAATTCCAAGAGGAATTTCGGTATCTTTCTGTTGTACAAGGTGTTTATAATAACG
CAGTTGTTTCTTGGAAAATATCTACGCGTAATGATAATGAACTTGTATTAGATACGATTGAAATATTGGCACAAAAAAGAGACGTGCGTGGAACCATTCT
CCATTCAGATCAAGGATTCCAGTACACATCTCATGCCTACAACAAACGACTTTCCGATTTAAGTATCATTGGTAACTACTCCCGCAAAGGAAACTGCCAT
AATAACGTTTGTATCGAGTCATTTTTCTCCCATTTCAAATCGGAGATGTTGTATTTGAATCATTTTAAAACAGAAGAAAATTTAATACAAGCCAATGAAA
AATATATTTACTTTTATAACTATAGACGGTTCAAAAAACGACTCAACCATCAAGCTTCAATAGAATCTCAAATCTCGATGACTGCTTAGTCTTTTTAATA
CTGTCTACTTGACAGGGGTAGGAACATAATCGGTCAATTTTAAATATGGGGCATATATTGATATTTTATAAAATTTGTTACGTTTTTTGTATTTTTTCA
ATGGTTTACGAAATTTGCGGGTGTACATCGTTGAAGTATTCATACCAAAGGTATGAAAAATATACGGCTAGAACTCGAAAAATGATTAAAAAAGTAAGAT
CTATTCACGTAAAGCACAAAGAATTTGGTTATCCACATATGAAAATCCCTTTACAGGAAGAGGGATATTTTATAAATCACAAGAAAGTATATCGCTTAAA
GATGGGGCTAAACATCCAATCTATTATTCGAAAGAAGCGTTGCTTCTTTAAAGGGAACTATTCCAAATTTTTTCTGAATGTTTTAAATCGTGAGTTTAAA
GATCGCCAACAAAATGAGGCACTTGTTACAGATATTACTTACCTACAATTCCAAGAGGAATTTCGGTATCTTTCTGTTGTACAAGGTGTTTATAATAACG
CAGTTGTTTCTTGGAAAATATCTACGCGTAATGATAATGAACTTGTATTAGATACGATTGAAATATTGGCACAAAAAAGAGACGTGCGTGGAACCATTCT
CCATTCAGATCAAGGATTCCAGTACACATCTCATGCCTACAACAAACGACTTTCCGATTTAAGTATCATTGGTAACTACTCCCGCAAAGGAAACTGCCAT
AATAACGTTTGTATCGAGTCATTTTTCTCCCATTTCAAATCGGAGATGTTGTATTTGAATCATTTTAAAACAGAAGAAAATTTAATACAAGCCAATGAAA
AATATATTTACTTTTATAACTATAGACGGTTCAAAAAACGACTCAACCATCAAGCTTCAATAGAATCTCAAATCTCGATGACTGCTTAGTCTTTTTAATA
CTGTCTACTTGACAGGGGTAGGAACATAATCGGTCAATTTTAAATATGGGGCATATATTGATATTTTATAAAATTTGTTACGTTTTTTGTATTTTTTCA
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
789 bp | 262 aa | 100 | 888 | + | No |
Chemistry : DDE
ORF sequence :
MVYEICGCTSLKYSYQRYEKYTARTRKMIKKVRSIHVKHKEFGYPHMKIPLQEEGYFINHKKVYRLKMGLNIQSIIRKKRCFFKGNYSKFFLNVLNREFK
DRQQNEALVTDITYLQFQEEFRYLSVVQGVYNNAVVSWKISTRNDNELVLDTIEILAQKRDVRGTILHSDQGFQYTSHAYNKRLSDLSIIGNYSRKGNCH
NNVCIESFFSHFKSEMLYLNHFKTEENLIQANEKYIYFYNYRRFKKRLNHQASIESQISMTA
DRQQNEALVTDITYLQFQEEFRYLSVVQGVYNNAVVSWKISTRNDNELVLDTIEILAQKRDVRGTILHSDQGFQYTSHAYNKRLSDLSIIGNYSRKGNCH
NNVCIESFFSHFKSEMLYLNHFKTEENLIQANEKYIYFYNYRRFKKRLNHQASIESQISMTA
Blast result :
Comments
References
1] Smith,G.P., Ellar,D.J., Keeler,S.J. and Seip,C.E.(1994) Plasmid 32 (1), 10-18