ISBth1

  • Family IS3
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
L29100 ND Bacillus thuringiensis
Bacillus thuringiensis
DNA section
IS Length : 999 bp

Ends


IR Length : 15/17

IRL : TGAAAAAATATAAAGAATTTAGTGGAATTACAGATACTTGTGGGAAAAAT
IRR : TGAAAAAATACAAAAAACGTAACAAATTTTATAAAATATCAATATATGCC

Insertion site


Left flankDirect repeatRight flankDR Length

DNA sequence

TGAAAAAATATAAAGAATTTAGTGGAATTACAGATACTTGTGGGAAAAATGGTGGAATGAAAGGTGTATCAAATTGGTTAAAAGAGAAATATCCAGTTAT
ATGGTTTACGAAATTTGCGGGTGTACATCGTTGAAGTATTCATACCAAAGGTATGAAAAATATACGGCTAGAACTCGAAAAATGATTAAAAAAGTAAGAT
CTATTCACGTAAAGCACAAAGAATTTGGTTATCCACATATGAAAATCCCTTTACAGGAAGAGGGATATTTTATAAATCACAAGAAAGTATATCGCTTAAA
GATGGGGCTAAACATCCAATCTATTATTCGAAAGAAGCGTTGCTTCTTTAAAGGGAACTATTCCAAATTTTTTCTGAATGTTTTAAATCGTGAGTTTAAA
GATCGCCAACAAAATGAGGCACTTGTTACAGATATTACTTACCTACAATTCCAAGAGGAATTTCGGTATCTTTCTGTTGTACAAGGTGTTTATAATAACG
CAGTTGTTTCTTGGAAAATATCTACGCGTAATGATAATGAACTTGTATTAGATACGATTGAAATATTGGCACAAAAAAGAGACGTGCGTGGAACCATTCT
CCATTCAGATCAAGGATTCCAGTACACATCTCATGCCTACAACAAACGACTTTCCGATTTAAGTATCATTGGTAACTACTCCCGCAAAGGAAACTGCCAT
AATAACGTTTGTATCGAGTCATTTTTCTCCCATTTCAAATCGGAGATGTTGTATTTGAATCATTTTAAAACAGAAGAAAATTTAATACAAGCCAATGAAA
AATATATTTACTTTTATAACTATAGACGGTTCAAAAAACGACTCAACCATCAAGCTTCAATAGAATCTCAAATCTCGATGACTGCTTAGTCTTTTTAATA
CTGTCTACTTGACAGGGGTAGGAACATAATCGGTCAATTTTAAATATGGGGCATATATTGATATTTTATAAAATTTGTTACGTTTTTTGTATTTTTTCA
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
789 bp262 aa100888+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MVYEICGCTSLKYSYQRYEKYTARTRKMIKKVRSIHVKHKEFGYPHMKIPLQEEGYFINHKKVYRLKMGLNIQSIIRKKRCFFKGNYSKFFLNVLNREFK
DRQQNEALVTDITYLQFQEEFRYLSVVQGVYNNAVVSWKISTRNDNELVLDTIEILAQKRDVRGTILHSDQGFQYTSHAYNKRLSDLSIIGNYSRKGNCH
NNVCIESFFSHFKSEMLYLNHFKTEENLIQANEKYIYFYNYRRFKKRLNHQASIESQISMTA

 

Blast result :
Comments
References
1] Smith,G.P., Ellar,D.J., Keeler,S.J. and Seip,C.E.(1994) Plasmid 32 (1), 10-18