ISBli21
- Family IS21
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
CP017150 | ND | Brevibacterium linens | Brevibacterium linens BL2 Brevibacterium linens Brevibacterium aurantiacum |
DNA section
IS Length : 2584 bp
Ends
IR Length : 15/26
IRL : TGAATATTCGCTTCGGTGGGATCCACCAATCGCGTGTGCGGGAGCCACTT
IRR : TGAGTATTTGAAGTTGTGAAGGCCACTCGATATTGCCTCCCGGGACCATC
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
AACGATCTTCG | CCCAGAC | CACAGCCGAGGC | 7 |
DNA sequence
TGAATATTCGCTTCGGTGGGATCCACCAATCGCGTGTGCGGGAGCCACTTTGTTGATCCCTGGATAGTGCGCGCGGGGACCACCAGTGGTGTGCTTGGGG
GCCACCGCGCTTAGGCTCCTTCCACCGCGTGTATACGGCACGCGGTGGAAGGAGACCATTCATGGTACGCAAAATCAGAGCCAAGTTGGTGCTGCAGCTA
CGCGCAGACGGGCTGTCGGCACGAGCGATCGCGGCGTCACAGGGCATGTCGCGGAAGTCCGTGGCCGCGGTCATCGAGGCCGCCGATGCGGCCAGGCTAC
GTTGGGACGACGTCAAGGCCGGCACGGATGACGAGGTCTACGAGCTGGTCTTCCCAGGGCGCGGTCAGCATCACAGCGTGTTCGCTCAGCCGGATTGGGA
GCAGGTCCACAAAGAGCTCGCTCGTGTCGGGGTCACGTTGAAGCTATTGCACAGCGAGTACGCCGATGACTGCGCGGCTGCGAGAGCGCCGGCAATGGGC
TACGACCGTTTCTGCCGGACCTATCAGCGTCATGTCCTCGTCACCGGAGCCGCGTCCAGGGTCGGACACAAGGCGGGGCAGACGATCGAGGTTGACTGGT
CCGGGCCTACGATGCAGCTGCATGATCCGGCCACTGGCAGGACGAGGATGGTGTACTTGTTCGTCGGCTGCCTGCCCTTTAGCCGGTACGCGTTCGTCGA
GCCTGCCTTGGATATGAAGCAGGACACCTGGCTGCGGGCTCATGTGGCAATGTTCGAAGCCTTTGGCGGGTCGAGCCCACGGATCGTGCCAGATAACCTC
AAGACCGGGGTACTCAAGCATCCCCGGGAGGGCGAGATCGTCCTCAACGATGCGTATCGGGAGATGGCGGCCCATTATCGTGCGGCGGTGTTGCCGGGCA
GGACCAGGGCACCGAAAGACAAAGCCAGCGTGGAGAACACCGTGTCGCACGTCGCGACCTGGATCATCGCCGGACTACGACAGGCTCGGTTCCAGACCCT
GCCGGAACTTCGGGCAGCGATCATCGAGAGAGTGGCCGGCTACAACGCTGAACCGTTCCAGAAGCGGCCCGGCTCCCGAGCCAGTGTGTTCGCCGCGCAT
GAGCAGTCGTTGCTGACACCTCTGCCGCAGGTGCCCTACGAGATCAGCCATTGGGTCTATGGACGGCGGGTTGCCCGCAACGGGCATGTGAGCTGGCAAC
GCAATCACTACTCGGTCCCGTTCGCGCATATCGGCACGAAAGTCGATCTGCGCATCACTGACCGGGTACTCGAGGCCTACCGGGGCACCGAGCGGCTGAG
CAGCCACCTGCTGCTGGCTGAGGGCGCGGCCAATGAGTATCGGACGAACGATGCTGACCTGCCCACCGGTGAAAGATATCAGCCCTGGGATGGGCCAAGG
GTGAGGGAGTGGGCCGAGCGAATCGGGCCTTCGGCCCTCGTGGTCGTCAACAGGATCTTCGAGTCCGTACCGATCGACGTGCAGGGACTCGATGCTGCGC
TGGCGGTGCTGCGGCTGTCGCGACGTTTCTCGGCAGAGCGGGTGGAGGCCGCCTGCAGGATCGGCCTGGCTGGCCCGATCCGTTCCCCACGCTATGCCCA
CCTGCAGCCGATCCTTGCCACTGGACAGGACAGGGCCGAACTGTTGCGGCCACCAAGAGAACAACGCGTCGAGCATGGCGGCTATGTCCGCGGTGCGTCC
TACTACGCAGAAGGGGACGCGAAATGAGTCAGATCGATACCGAGACCAAGCGCAAGTTGCGTGAGATGGGCGCGGGCCCGTTGTTAGAAGCCTGGGAGGG
CGAAGACGAGGGCCTGGTGTTGGGAATGAGCTTCGAGGACAGGCTGCGGCTGGTCGTCGATGAAGCTCACTCGGCGTTCAATCATGACAAGGTCGAGGGC
CTGATCCGGCGGGCCGGACTGCGTTACCCCGGAGCAGATCTGCGCCGCGTGGATCGAGTGGAGGAACGTGGATTGGATCGCCATGTCCTTGCCCAGCTGG
GCACGTGTTCGTTTATCGAGCGTCAGCAGAACGTGGTATTCCAGGGCTTCACCGGTTCTGGGAAGTCCTACCTGGGGTGCGCGTTGGCGAAGCAGGCCTG
TCAGCATCGGATCCGAGCGCACTACATTCGCATGCCTGATCTTGAAGAGGCGTGGGCGATTGCGAAGGACAAGCCGCAGGGGACGACGAAGTTCCTCCGC
AAGTACGCTGCCTTCACGTTGCTGGTCATCGATGAATGGCTGCTCGATCATCCGGATGAGTCGATGCGCGGAATGCTGCTGGAATTGCTCGAGCGTCGTT
ATGACAGCACGTCGACGGTGTTCTGTACTCAGTATGCCAAGAAGGACTGGCACCAACGACTCGGATCCGGGGTTCACGCTGATGCGATCATGGATCGCAT
CGTGCACAACACCATCTGGGTTGATACCGGCACTCACAATATGCGAGAACAAGCGATGCTGAACCAGTAAGAAGATAGTCGGTGGGGGCCTGTGGCCCCC
ACCGACACCACTCCTGGCCCCCACGGTCAATATCGATGGTCCCGGGAGGCAATATCGAGTGGCCTTCACAACTTCAAATACTCA
GCCACCGCGCTTAGGCTCCTTCCACCGCGTGTATACGGCACGCGGTGGAAGGAGACCATTCATGGTACGCAAAATCAGAGCCAAGTTGGTGCTGCAGCTA
CGCGCAGACGGGCTGTCGGCACGAGCGATCGCGGCGTCACAGGGCATGTCGCGGAAGTCCGTGGCCGCGGTCATCGAGGCCGCCGATGCGGCCAGGCTAC
GTTGGGACGACGTCAAGGCCGGCACGGATGACGAGGTCTACGAGCTGGTCTTCCCAGGGCGCGGTCAGCATCACAGCGTGTTCGCTCAGCCGGATTGGGA
GCAGGTCCACAAAGAGCTCGCTCGTGTCGGGGTCACGTTGAAGCTATTGCACAGCGAGTACGCCGATGACTGCGCGGCTGCGAGAGCGCCGGCAATGGGC
TACGACCGTTTCTGCCGGACCTATCAGCGTCATGTCCTCGTCACCGGAGCCGCGTCCAGGGTCGGACACAAGGCGGGGCAGACGATCGAGGTTGACTGGT
CCGGGCCTACGATGCAGCTGCATGATCCGGCCACTGGCAGGACGAGGATGGTGTACTTGTTCGTCGGCTGCCTGCCCTTTAGCCGGTACGCGTTCGTCGA
GCCTGCCTTGGATATGAAGCAGGACACCTGGCTGCGGGCTCATGTGGCAATGTTCGAAGCCTTTGGCGGGTCGAGCCCACGGATCGTGCCAGATAACCTC
AAGACCGGGGTACTCAAGCATCCCCGGGAGGGCGAGATCGTCCTCAACGATGCGTATCGGGAGATGGCGGCCCATTATCGTGCGGCGGTGTTGCCGGGCA
GGACCAGGGCACCGAAAGACAAAGCCAGCGTGGAGAACACCGTGTCGCACGTCGCGACCTGGATCATCGCCGGACTACGACAGGCTCGGTTCCAGACCCT
GCCGGAACTTCGGGCAGCGATCATCGAGAGAGTGGCCGGCTACAACGCTGAACCGTTCCAGAAGCGGCCCGGCTCCCGAGCCAGTGTGTTCGCCGCGCAT
GAGCAGTCGTTGCTGACACCTCTGCCGCAGGTGCCCTACGAGATCAGCCATTGGGTCTATGGACGGCGGGTTGCCCGCAACGGGCATGTGAGCTGGCAAC
GCAATCACTACTCGGTCCCGTTCGCGCATATCGGCACGAAAGTCGATCTGCGCATCACTGACCGGGTACTCGAGGCCTACCGGGGCACCGAGCGGCTGAG
CAGCCACCTGCTGCTGGCTGAGGGCGCGGCCAATGAGTATCGGACGAACGATGCTGACCTGCCCACCGGTGAAAGATATCAGCCCTGGGATGGGCCAAGG
GTGAGGGAGTGGGCCGAGCGAATCGGGCCTTCGGCCCTCGTGGTCGTCAACAGGATCTTCGAGTCCGTACCGATCGACGTGCAGGGACTCGATGCTGCGC
TGGCGGTGCTGCGGCTGTCGCGACGTTTCTCGGCAGAGCGGGTGGAGGCCGCCTGCAGGATCGGCCTGGCTGGCCCGATCCGTTCCCCACGCTATGCCCA
CCTGCAGCCGATCCTTGCCACTGGACAGGACAGGGCCGAACTGTTGCGGCCACCAAGAGAACAACGCGTCGAGCATGGCGGCTATGTCCGCGGTGCGTCC
TACTACGCAGAAGGGGACGCGAAATGAGTCAGATCGATACCGAGACCAAGCGCAAGTTGCGTGAGATGGGCGCGGGCCCGTTGTTAGAAGCCTGGGAGGG
CGAAGACGAGGGCCTGGTGTTGGGAATGAGCTTCGAGGACAGGCTGCGGCTGGTCGTCGATGAAGCTCACTCGGCGTTCAATCATGACAAGGTCGAGGGC
CTGATCCGGCGGGCCGGACTGCGTTACCCCGGAGCAGATCTGCGCCGCGTGGATCGAGTGGAGGAACGTGGATTGGATCGCCATGTCCTTGCCCAGCTGG
GCACGTGTTCGTTTATCGAGCGTCAGCAGAACGTGGTATTCCAGGGCTTCACCGGTTCTGGGAAGTCCTACCTGGGGTGCGCGTTGGCGAAGCAGGCCTG
TCAGCATCGGATCCGAGCGCACTACATTCGCATGCCTGATCTTGAAGAGGCGTGGGCGATTGCGAAGGACAAGCCGCAGGGGACGACGAAGTTCCTCCGC
AAGTACGCTGCCTTCACGTTGCTGGTCATCGATGAATGGCTGCTCGATCATCCGGATGAGTCGATGCGCGGAATGCTGCTGGAATTGCTCGAGCGTCGTT
ATGACAGCACGTCGACGGTGTTCTGTACTCAGTATGCCAAGAAGGACTGGCACCAACGACTCGGATCCGGGGTTCACGCTGATGCGATCATGGATCGCAT
CGTGCACAACACCATCTGGGTTGATACCGGCACTCACAATATGCGAGAACAAGCGATGCTGAACCAGTAAGAAGATAGTCGGTGGGGGCCTGTGGCCCCC
ACCGACACCACTCCTGGCCCCCACGGTCAATATCGATGGTCCCGGGAGGCAATATCGAGTGGCCTTCACAACTTCAAATACTCA
Protein section
ORF number : 2
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1566 bp | 521 aa | 162 | 1727 | + | No |
Chemistry : DDE
ORF sequence :
MVRKIRAKLVLQLRADGLSARAIAASQGMSRKSVAAVIEAADAARLRWDDVKAGTDDEVYELVFPGRGQHHSVFAQPDWEQVHKELARVGVTLKLLHSEY
ADDCAAARAPAMGYDRFCRTYQRHVLVTGAASRVGHKAGQTIEVDWSGPTMQLHDPATGRTRMVYLFVGCLPFSRYAFVEPALDMKQDTWLRAHVAMFEA
FGGSSPRIVPDNLKTGVLKHPREGEIVLNDAYREMAAHYRAAVLPGRTRAPKDKASVENTVSHVATWIIAGLRQARFQTLPELRAAIIERVAGYNAEPFQ
KRPGSRASVFAAHEQSLLTPLPQVPYEISHWVYGRRVARNGHVSWQRNHYSVPFAHIGTKVDLRITDRVLEAYRGTERLSSHLLLAEGAANEYRTNDADL
PTGERYQPWDGPRVREWAERIGPSALVVVNRIFESVPIDVQGLDAALAVLRLSRRFSAERVEAACRIGLAGPIRSPRYAHLQPILATGQDRAELLRPPRE
QRVEHGGYVRGASYYAEGDAK
ADDCAAARAPAMGYDRFCRTYQRHVLVTGAASRVGHKAGQTIEVDWSGPTMQLHDPATGRTRMVYLFVGCLPFSRYAFVEPALDMKQDTWLRAHVAMFEA
FGGSSPRIVPDNLKTGVLKHPREGEIVLNDAYREMAAHYRAAVLPGRTRAPKDKASVENTVSHVATWIIAGLRQARFQTLPELRAAIIERVAGYNAEPFQ
KRPGSRASVFAAHEQSLLTPLPQVPYEISHWVYGRRVARNGHVSWQRNHYSVPFAHIGTKVDLRITDRVLEAYRGTERLSSHLLLAEGAANEYRTNDADL
PTGERYQPWDGPRVREWAERIGPSALVVVNRIFESVPIDVQGLDAALAVLRLSRRFSAERVEAACRIGLAGPIRSPRYAHLQPILATGQDRAELLRPPRE
QRVEHGGYVRGASYYAEGDAK
Blast result :ORF 2
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
747 bp | 248 aa | 1724 | 2470 | + | No |
AG : IS21 helper
ORF sequence :
MSQIDTETKRKLREMGAGPLLEAWEGEDEGLVLGMSFEDRLRLVVDEAHSAFNHDKVEGLIRRAGLRYPGADLRRVDRVEERGLDRHVLAQLGTCSFIER
QQNVVFQGFTGSGKSYLGCALAKQACQHRIRAHYIRMPDLEEAWAIAKDKPQGTTKFLRKYAAFTLLVIDEWLLDHPDESMRGMLLELLERRYDSTSTVF
CTQYAKKDWHQRLGSGVHADAIMDRIVHNTIWVDTGTHNMREQAMLNQ
QQNVVFQGFTGSGKSYLGCALAKQACQHRIRAHYIRMPDLEEAWAIAKDKPQGTTKFLRKYAAFTLLVIDEWLLDHPDESMRGMLLELLERRYDSTSTVF
CTQYAKKDWHQRLGSGVHADAIMDRIVHNTIWVDTGTHNMREQAMLNQ
Blast result :
Comments
ISBli21 is 76% aa similar to ISAar36.
References
1] Sebastien Levesque (2017) Direct submission.
2] de Melo,A.G., Labrie,S.J., Dumaresq,J., Roberts,R.J., Tremblay,D.M. and Moineau,S. (2016) Direct GenBank submission.
2] de Melo,A.G., Labrie,S.J., Dumaresq,J., Roberts,R.J., Tremblay,D.M. and Moineau,S. (2016) Direct GenBank submission.